RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
SNHG4-201ENST00000448190 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
SNHG4-201ENST00000448190 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
SNHG4-201ENST00000448190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNHG4-201ENST00000448190 ARHGEF10O15013 1369 aa18.66■□□□□ 0.58
SNHG4-201ENST00000448190 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
SNHG4-201ENST00000448190 AFF2P51816 1311 aa18.65■□□□□ 0.58
SNHG4-201ENST00000448190 NLRP6P59044 892 aa18.64■□□□□ 0.57
SNHG4-201ENST00000448190 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
SNHG4-201ENST00000448190 KTN1Q86UP2 1357 aaKnown RBP18.64■□□□□ 0.57
SNHG4-201ENST00000448190 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SNHG4-201ENST00000448190 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
SNHG4-201ENST00000448190 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
SNHG4-201ENST00000448190 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
SNHG4-201ENST00000448190 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
SNHG4-201ENST00000448190 USP6P35125 1406 aa18.61■□□□□ 0.57
SNHG4-201ENST00000448190 FAM83GA6ND36 823 aa18.61■□□□□ 0.57
SNHG4-201ENST00000448190 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
SNHG4-201ENST00000448190 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
SNHG4-201ENST00000448190 USP21Q9UK80 565 aa18.6■□□□□ 0.57
SNHG4-201ENST00000448190 CPSF1Q10570 1443 aaKnown RBP18.59■□□□□ 0.57
SNHG4-201ENST00000448190 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
SNHG4-201ENST00000448190 SOX12O15370 315 aa18.59■□□□□ 0.57
SNHG4-201ENST00000448190 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
SNHG4-201ENST00000448190 NME9Q86XW9 330 aa18.59■□□□□ 0.57
SNHG4-201ENST00000448190 QTRT2Q9H974 415 aaKnown RBP18.59■□□□□ 0.57
SNHG4-201ENST00000448190 CHRNA2Q15822 529 aa18.58■□□□□ 0.56
SNHG4-201ENST00000448190 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
SNHG4-201ENST00000448190 TOPAZ1Q8N9V7 1692 aa18.57■□□□□ 0.56
SNHG4-201ENST00000448190 GCP02774 474 aa18.57■□□□□ 0.56
SNHG4-201ENST00000448190 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
SNHG4-201ENST00000448190 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
SNHG4-201ENST00000448190 CD163L1Q9NR16 1453 aa18.56■□□□□ 0.56
SNHG4-201ENST00000448190 PRDM11Q9NQV5 511 aa18.55■□□□□ 0.56
SNHG4-201ENST00000448190 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
SNHG4-201ENST00000448190 ITSN1Q15811 1721 aa18.54■□□□□ 0.56
SNHG4-201ENST00000448190 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
SNHG4-201ENST00000448190 CARD14Q9BXL6 1004 aa18.54■□□□□ 0.56
SNHG4-201ENST00000448190 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
SNHG4-201ENST00000448190 BTG4Q9NY30 223 aa18.53■□□□□ 0.56
SNHG4-201ENST00000448190 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
SNHG4-201ENST00000448190 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
SNHG4-201ENST00000448190 RXRBP28702 533 aa18.52■□□□□ 0.56
SNHG4-201ENST00000448190 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
SNHG4-201ENST00000448190 USP19O94966 1318 aa18.51■□□□□ 0.55
SNHG4-201ENST00000448190 PANK3Q9H999 370 aa18.51■□□□□ 0.55
SNHG4-201ENST00000448190 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
SNHG4-201ENST00000448190 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
SNHG4-201ENST00000448190 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
SNHG4-201ENST00000448190 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
SNHG4-201ENST00000448190 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
SNHG4-201ENST00000448190 FBLN1P23142 703 aa18.49■□□□□ 0.55
SNHG4-201ENST00000448190 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
SNHG4-201ENST00000448190 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
SNHG4-201ENST00000448190 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
SNHG4-201ENST00000448190 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
SNHG4-201ENST00000448190 FYB1O15117 783 aa18.48■□□□□ 0.55
SNHG4-201ENST00000448190 STRN4Q9NRL3 753 aa18.48■□□□□ 0.55
SNHG4-201ENST00000448190 EVA1CP58658 441 aa18.47■□□□□ 0.55
SNHG4-201ENST00000448190 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
SNHG4-201ENST00000448190 COG3Q96JB2 828 aa18.47■□□□□ 0.55
SNHG4-201ENST00000448190 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
SNHG4-201ENST00000448190 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
SNHG4-201ENST00000448190 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
SNHG4-201ENST00000448190 SLIT2O94813 1529 aa18.44■□□□□ 0.54
SNHG4-201ENST00000448190 USP31Q70CQ4 1352 aa18.44■□□□□ 0.54
SNHG4-201ENST00000448190 AXIN2Q9Y2T1 843 aa18.44■□□□□ 0.54
SNHG4-201ENST00000448190 VPS72Q15906 364 aa18.43■□□□□ 0.54
SNHG4-201ENST00000448190 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
SNHG4-201ENST00000448190 NSD3Q9BZ95 1437 aa18.42■□□□□ 0.54
SNHG4-201ENST00000448190 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
SNHG4-201ENST00000448190 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
SNHG4-201ENST00000448190 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
SNHG4-201ENST00000448190 CPDO75976 1380 aa18.41■□□□□ 0.54
SNHG4-201ENST00000448190 ATRNO75882 1429 aa18.4■□□□□ 0.54
SNHG4-201ENST00000448190 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
SNHG4-201ENST00000448190 PIK3C2AO00443 1686 aa18.4■□□□□ 0.54
SNHG4-201ENST00000448190 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
SNHG4-201ENST00000448190 AKAP12Q02952 1782 aa18.39■□□□□ 0.53
SNHG4-201ENST00000448190 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
SNHG4-201ENST00000448190 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SNHG4-201ENST00000448190 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
SNHG4-201ENST00000448190 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
SNHG4-201ENST00000448190 A0A0G2JS52 829 aa18.37■□□□□ 0.53
SNHG4-201ENST00000448190 MYT1Q01538 1121 aa18.37■□□□□ 0.53
SNHG4-201ENST00000448190 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
SNHG4-201ENST00000448190 SLIT3O75094 1523 aa18.36■□□□□ 0.53
SNHG4-201ENST00000448190 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
SNHG4-201ENST00000448190 SPATA31A5Q5VU36 1347 aa18.36■□□□□ 0.53
SNHG4-201ENST00000448190 SPATA31A7Q8IWB4 1347 aa18.36■□□□□ 0.53
SNHG4-201ENST00000448190 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
SNHG4-201ENST00000448190 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
SNHG4-201ENST00000448190 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 AMPHP49418 695 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
SNHG4-201ENST00000448190 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms