RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PAK3O75914 559 aaPredicted RBP30.64■■■□□ 2.5
APOE-204ENST00000446996 TERF2IPQ9NYB0 399 aa30.64■■■□□ 2.5
APOE-204ENST00000446996 LRP6O75581 1613 aa30.64■■■□□ 2.5
APOE-204ENST00000446996 CD163L1Q9NR16 1453 aa30.63■■■□□ 2.49
APOE-204ENST00000446996 HDGFL2Q7Z4V5 671 aaPredicted RBP30.63■■■□□ 2.49
APOE-204ENST00000446996 MON2Q7Z3U7 1717 aa30.62■■■□□ 2.49
APOE-204ENST00000446996 ZEB1P37275 1124 aaPredicted RBP30.62■■■□□ 2.49
APOE-204ENST00000446996 LMOD2Q6P5Q4 547 aa30.62■■■□□ 2.49
APOE-204ENST00000446996 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
APOE-204ENST00000446996 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
APOE-204ENST00000446996 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
APOE-204ENST00000446996 KTN1Q86UP2 1357 aaKnown RBP30.61■■■□□ 2.49
APOE-204ENST00000446996 TTC21AQ8NDW8 1320 aa30.59■■■□□ 2.49
APOE-204ENST00000446996 TTC21BQ7Z4L5 1316 aa30.57■■■□□ 2.48
APOE-204ENST00000446996 ABTB2Q8N961 1025 aa30.57■■■□□ 2.48
APOE-204ENST00000446996 MEX3CQ5U5Q3 659 aaKnown RBP30.56■■■□□ 2.48
APOE-204ENST00000446996 NRKQ7Z2Y5 1582 aa30.56■■■□□ 2.48
APOE-204ENST00000446996 MARF1Q9Y4F3 1742 aaKnown RBP30.56■■■□□ 2.48
APOE-204ENST00000446996 A0A1W2PP64 1363 aa30.55■■■□□ 2.48
APOE-204ENST00000446996 ANKRD36BQ8N2N9 1353 aa30.55■■■□□ 2.48
APOE-204ENST00000446996 NLRP13Q86W25 1043 aa30.55■■■□□ 2.48
APOE-204ENST00000446996 ABCA3Q99758 1704 aa30.54■■■□□ 2.48
APOE-204ENST00000446996 RGS17Q9UGC6 210 aaPredicted RBP30.54■■■□□ 2.48
APOE-204ENST00000446996 EDC4Q6P2E9 1401 aaKnown RBP30.54■■■□□ 2.48
APOE-204ENST00000446996 CRYBG1Q9Y4K1 1723 aa30.53■■■□□ 2.48
APOE-204ENST00000446996 MYOM1P52179 1685 aa30.52■■■□□ 2.48
APOE-204ENST00000446996 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
APOE-204ENST00000446996 CABLES1Q8TDN4 633 aa30.5■■■□□ 2.47
APOE-204ENST00000446996 USP19O94966 1318 aa30.49■■■□□ 2.47
APOE-204ENST00000446996 ADAMTS2O95450 1211 aa30.49■■■□□ 2.47
APOE-204ENST00000446996 C11orf95C9JLR9 678 aaPredicted RBP30.48■■■□□ 2.47
APOE-204ENST00000446996 PIK3C2AO00443 1686 aa30.48■■■□□ 2.47
APOE-204ENST00000446996 NLRP6P59044 892 aa30.47■■■□□ 2.47
APOE-204ENST00000446996 USP31Q70CQ4 1352 aa30.46■■■□□ 2.47
APOE-204ENST00000446996 PHRF1Q9P1Y6 1649 aaKnown RBP30.46■■■□□ 2.47
APOE-204ENST00000446996 NUTM2GQ5VZR2 741 aa30.45■■■□□ 2.47
APOE-204ENST00000446996 C8orf37Q96NL8 207 aa30.45■■■□□ 2.47
APOE-204ENST00000446996 USP54Q70EL1 1684 aa30.45■■■□□ 2.46
APOE-204ENST00000446996 ZNF772Q68DY9 489 aaPredicted RBP30.44■■■□□ 2.46
APOE-204ENST00000446996 FNBP4Q8N3X1 1017 aaPredicted RBP30.44■■■□□ 2.46
APOE-204ENST00000446996 NGLY1Q96IV0 654 aa30.44■■■□□ 2.46
APOE-204ENST00000446996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.42■■■□□ 2.46
APOE-204ENST00000446996 KIF7Q2M1P5 1343 aa30.42■■■□□ 2.46
APOE-204ENST00000446996 SLIT3O75094 1523 aa30.42■■■□□ 2.46
APOE-204ENST00000446996 POLR3GLQ9BT43 218 aa30.41■■■□□ 2.46
APOE-204ENST00000446996 AFF2P51816 1311 aa30.41■■■□□ 2.46
APOE-204ENST00000446996 GCP02774 474 aa30.4■■■□□ 2.46
APOE-204ENST00000446996 KCNH5Q8NCM2 988 aa30.39■■■□□ 2.46
APOE-204ENST00000446996 PLEKHG5O94827 1062 aa30.38■■■□□ 2.45
APOE-204ENST00000446996 CPDO75976 1380 aa30.38■■■□□ 2.45
APOE-204ENST00000446996 SLIT2O94813 1529 aa30.37■■■□□ 2.45
APOE-204ENST00000446996 NME9Q86XW9 330 aa30.37■■■□□ 2.45
APOE-204ENST00000446996 COL14A1Q05707 1796 aaKnown RBP30.36■■■□□ 2.45
APOE-204ENST00000446996 NWD2Q9ULI1 1742 aa30.36■■■□□ 2.45
APOE-204ENST00000446996 FAM83GA6ND36 823 aa30.35■■■□□ 2.45
APOE-204ENST00000446996 POTEAQ6S8J7 498 aa30.35■■■□□ 2.45
APOE-204ENST00000446996 CARD14Q9BXL6 1004 aa30.35■■■□□ 2.45
APOE-204ENST00000446996 CCDC7Q96M83 1385 aa30.34■■■□□ 2.45
APOE-204ENST00000446996 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.33■■■□□ 2.45
APOE-204ENST00000446996 OVOS2A0A0J9YW53 1432 aa30.33■■■□□ 2.45
APOE-204ENST00000446996 OVOS2Q6IE36 1432 aa30.33■■■□□ 2.45
APOE-204ENST00000446996 USP21Q9UK80 565 aa30.33■■■□□ 2.45
APOE-204ENST00000446996 KIAA0232Q92628 1395 aa30.32■■■□□ 2.44
APOE-204ENST00000446996 PRDM11Q9NQV5 511 aa30.32■■■□□ 2.44
APOE-204ENST00000446996 BCL9LQ86UU0 1499 aa30.31■■■□□ 2.44
APOE-204ENST00000446996 NSD3Q9BZ95 1437 aa30.31■■■□□ 2.44
APOE-204ENST00000446996 FYB1O15117 783 aa30.31■■■□□ 2.44
APOE-204ENST00000446996 PANK3Q9H999 370 aa30.31■■■□□ 2.44
APOE-204ENST00000446996 PLCH1Q4KWH8 1693 aa30.3■■■□□ 2.44
APOE-204ENST00000446996 WASHC2AQ641Q2 1341 aa30.3■■■□□ 2.44
APOE-204ENST00000446996 ZC3H6P61129 1189 aaKnown RBP30.3■■■□□ 2.44
APOE-204ENST00000446996 UNC5CLQ8IV45 518 aa30.3■■■□□ 2.44
APOE-204ENST00000446996 ZRANB1Q9UGI0 708 aa30.3■■■□□ 2.44
APOE-204ENST00000446996 KIF20BQ96Q89 1820 aa30.29■■■□□ 2.44
APOE-204ENST00000446996 COG3Q96JB2 828 aa30.29■■■□□ 2.44
APOE-204ENST00000446996 TRPC5Q9UL62 973 aaPredicted RBP30.28■■■□□ 2.44
APOE-204ENST00000446996 QTRT2Q9H974 415 aaKnown RBP30.27■■■□□ 2.44
APOE-204ENST00000446996 NFAT5O94916 1531 aa30.27■■■□□ 2.44
APOE-204ENST00000446996 CGNL1Q0VF96 1302 aa30.26■■■□□ 2.44
APOE-204ENST00000446996 ARHGEF25Q86VW2 580 aa30.26■■■□□ 2.43
APOE-204ENST00000446996 ATRNO75882 1429 aa30.25■■■□□ 2.43
APOE-204ENST00000446996 BTG4Q9NY30 223 aa30.24■■■□□ 2.43
APOE-204ENST00000446996 AATKQ6ZMQ8 1374 aa30.24■■■□□ 2.43
APOE-204ENST00000446996 LMO7Q8WWI1 1683 aa30.23■■■□□ 2.43
APOE-204ENST00000446996 NRAPQ86VF7 1730 aa30.22■■■□□ 2.43
APOE-204ENST00000446996 GGNBP2Q9H3C7 697 aa30.22■■■□□ 2.43
APOE-204ENST00000446996 ABCC6O95255 1503 aa30.22■■■□□ 2.43
APOE-204ENST00000446996 CHRNA2Q15822 529 aa30.21■■■□□ 2.43
APOE-204ENST00000446996 COL18A1P39060 1754 aa30.2■■■□□ 2.43
APOE-204ENST00000446996 RXRBP28702 533 aa30.2■■■□□ 2.43
APOE-204ENST00000446996 RBM6P78332 1123 aaKnown RBP30.2■■■□□ 2.43
APOE-204ENST00000446996 VPS72Q15906 364 aa30.2■■■□□ 2.43
APOE-204ENST00000446996 NSD2O96028 1365 aa30.19■■■□□ 2.42
APOE-204ENST00000446996 KNSTRNQ9Y448 316 aa30.19■■■□□ 2.42
APOE-204ENST00000446996 CAMTA1Q9Y6Y1 1673 aa30.17■■■□□ 2.42
APOE-204ENST00000446996 ANKRD26Q9UPS8 1709 aa30.16■■■□□ 2.42
APOE-204ENST00000446996 SOX12O15370 315 aa30.16■■■□□ 2.42
APOE-204ENST00000446996 PER1O15534 1290 aaPredicted RBP30.16■■■□□ 2.42
APOE-204ENST00000446996 GJD4Q96KN9 370 aaPredicted RBP30.16■■■□□ 2.42
APOE-204ENST00000446996 CDK12Q9NYV4 1490 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 283.3 ms