RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 CTHP32929 405 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 ARMC2Q8NEN0 867 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 PRDM9Q9NQV7 894 aa7.51□□□□□ -1.21
R3HDM1-211ENST00000445855 TLL1O43897 1013 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 PTPN5P54829 565 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 KCNH2Q12809 1159 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 SEMA3FQ13275 785 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 TJAP1Q5JTD0 557 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 MYT1LQ9UL68 1186 aa7.5□□□□□ -1.21
R3HDM1-211ENST00000445855 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
R3HDM1-211ENST00000445855 GPSM3Q9Y4H4 160 aa7.49□□□□□ -1.21
R3HDM1-211ENST00000445855 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-211ENST00000445855 NBPF14Q5TI25 921 aa7.48□□□□□ -1.21
R3HDM1-211ENST00000445855 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
R3HDM1-211ENST00000445855 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
R3HDM1-211ENST00000445855 ZNF592Q92610 1267 aa7.47□□□□□ -1.21
R3HDM1-211ENST00000445855 SLC6A16Q9GZN6 736 aa7.47□□□□□ -1.21
R3HDM1-211ENST00000445855 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 PTK2Q05397 1052 aa7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 CFAP70Q5T0N1 1121 aa7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 ZNF516Q92618 1163 aa7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
R3HDM1-211ENST00000445855 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
R3HDM1-211ENST00000445855 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
R3HDM1-211ENST00000445855 CCDC24Q8N4L8 307 aa7.44□□□□□ -1.22
R3HDM1-211ENST00000445855 UNC93B1Q9H1C4 597 aa7.44□□□□□ -1.22
R3HDM1-211ENST00000445855 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
R3HDM1-211ENST00000445855 TRAIPQ9BWF2 469 aa7.43□□□□□ -1.22
R3HDM1-211ENST00000445855 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-211ENST00000445855 ATP9BO43861 1147 aa7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 RFX1P22670 979 aa7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 SRPK2P78362 688 aaKnown RBP7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 PDE4CQ08493 712 aa7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 RETREG2Q8NC44 543 aa7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 MAFBQ9Y5Q3 323 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-211ENST00000445855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 S1PR4O95977 384 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 TBC1D9Q6ZT07 1266 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 SH3BP5LQ7L8J4 393 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 HCSTQ9UBK5 93 aa7.41□□□□□ -1.22
R3HDM1-211ENST00000445855 NKX2-3Q8TAU0 364 aa7.4□□□□□ -1.22
R3HDM1-211ENST00000445855 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
R3HDM1-211ENST00000445855 FCF1Q9Y324 198 aaKnown RBP7.4□□□□□ -1.22
R3HDM1-211ENST00000445855 ITGBL1O95965 494 aaPredicted RBP7.39□□□□□ -1.23
R3HDM1-211ENST00000445855 KCNC4Q03721 635 aa7.39□□□□□ -1.23
R3HDM1-211ENST00000445855 ZBTB33Q86T24 672 aa7.39□□□□□ -1.23
R3HDM1-211ENST00000445855 PCDHB9Q9Y5E1 797 aa7.39□□□□□ -1.23
R3HDM1-211ENST00000445855 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
R3HDM1-211ENST00000445855 BPHLQ86WA6 291 aaPredicted RBP7.38□□□□□ -1.23
R3HDM1-211ENST00000445855 PCDH10Q9P2E7 1040 aa7.38□□□□□ -1.23
R3HDM1-211ENST00000445855 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
R3HDM1-211ENST00000445855 USTQ9Y2C2 406 aa7.38□□□□□ -1.23
R3HDM1-211ENST00000445855 PIK3CDO00329 1044 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 ATG7O95352 703 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 CSB-PGBD3P0DP91 1061 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 SKIP12755 728 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 TRIM26Q12899 539 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 PLEKHM2Q8IWE5 1019 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 ZNF511Q8NB15 262 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 BAP1Q92560 729 aa7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-211ENST00000445855 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 USP17L5A8MUK1 530 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 GGCXP38435 758 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-211ENST00000445855 MAGEB6P1A0A0J9YX57 407 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 LZTS3O60299 673 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 AGERQ15109 404 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 RNF135Q8IUD6 432 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 PHTF2Q8N3S3 785 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 FAM174AQ8TBP5 190 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
R3HDM1-211ENST00000445855 MAP7D1Q3KQU3 841 aa7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 ERFEQ4G0M1 354 aa7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 ANKLE1Q8NAG6 615 aa7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 CHIC2Q9UKJ5 165 aa7.34□□□□□ -1.23
R3HDM1-211ENST00000445855 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
R3HDM1-211ENST00000445855 ZBTB24O43167 697 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-211ENST00000445855 PLPP7Q8NBV4 271 aa7.33□□□□□ -1.24
R3HDM1-211ENST00000445855 FOXJ1Q92949 421 aa7.33□□□□□ -1.24
R3HDM1-211ENST00000445855 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms