RNA–Protein interactions for RNA: ENST00000443943.5

AP1S1-203, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 3

Gene AP1S1, Length 741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-203ENST00000443943 BRWD3Q6RI45 1802 aa30.19■■■□□ 2.42
AP1S1-203ENST00000443943 NRAPQ86VF7 1730 aa30.19■■■□□ 2.42
AP1S1-203ENST00000443943 ONECUT3O60422 494 aaPredicted RBP30.18■■■□□ 2.42
AP1S1-203ENST00000443943 COL14A1Q05707 1796 aaKnown RBP30.18■■■□□ 2.42
AP1S1-203ENST00000443943 A0A0G2JS52 829 aa30.17■■■□□ 2.42
AP1S1-203ENST00000443943 MYT1Q01538 1121 aa30.17■■■□□ 2.42
AP1S1-203ENST00000443943 CDK19Q9BWU1 502 aa30.17■■■□□ 2.42
AP1S1-203ENST00000443943 KIAA1210Q9ULL0 1709 aa30.16■■■□□ 2.42
AP1S1-203ENST00000443943 CRYBG1Q9Y4K1 1723 aa30.15■■■□□ 2.42
AP1S1-203ENST00000443943 KRT27Q7Z3Y8 459 aa30.14■■■□□ 2.42
AP1S1-203ENST00000443943 FAM98CQ17RN3 349 aaKnown RBP30.13■■■□□ 2.41
AP1S1-203ENST00000443943 NBPF1Q3BBV0 1214 aa30.12■■■□□ 2.41
AP1S1-203ENST00000443943 PRDM11Q9NQV5 511 aa30.12■■■□□ 2.41
AP1S1-203ENST00000443943 SF3B2Q13435 895 aaKnown RBP30.11■■■□□ 2.41
AP1S1-203ENST00000443943 TOPAZ1Q8N9V7 1692 aa30.11■■■□□ 2.41
AP1S1-203ENST00000443943 DEFB132Q7Z7B7 95 aa30.1■■■□□ 2.41
AP1S1-203ENST00000443943 POLR3AO14802 1390 aaPredicted RBP30.09■■■□□ 2.41
AP1S1-203ENST00000443943 CCDC61Q9Y6R9 512 aa30.09■■■□□ 2.41
AP1S1-203ENST00000443943 ACEP12821 1306 aa30.08■■■□□ 2.41
AP1S1-203ENST00000443943 KIAA0232Q92628 1395 aa30.07■■■□□ 2.4
AP1S1-203ENST00000443943 SPATA31A5Q5VU36 1347 aa30.06■■■□□ 2.4
AP1S1-203ENST00000443943 SPATA31A7Q8IWB4 1347 aa30.06■■■□□ 2.4
AP1S1-203ENST00000443943 NUTM2GQ5VZR2 741 aa30.06■■■□□ 2.4
AP1S1-203ENST00000443943 PHRF1Q9P1Y6 1649 aaKnown RBP30.06■■■□□ 2.4
AP1S1-203ENST00000443943 NBPF8Q3BBV2 869 aa30.05■■■□□ 2.4
AP1S1-203ENST00000443943 PLEKHG3A1L390 1219 aa30.04■■■□□ 2.4
AP1S1-203ENST00000443943 CENPJQ9HC77 1338 aaPredicted RBP30.03■■■□□ 2.4
AP1S1-203ENST00000443943 CHRNA2Q15822 529 aa30.03■■■□□ 2.4
AP1S1-203ENST00000443943 SRPK2P78362 688 aaKnown RBP30.02■■■□□ 2.4
AP1S1-203ENST00000443943 ZC3H6P61129 1189 aaKnown RBP30■■■□□ 2.39
AP1S1-203ENST00000443943 PPIP5K1Q6PFW1 1433 aa29.99■■■□□ 2.39
AP1S1-203ENST00000443943 THSD7AQ9UPZ6 1657 aa29.98■■■□□ 2.39
AP1S1-203ENST00000443943 STRN4Q9NRL3 753 aa29.98■■■□□ 2.39
AP1S1-203ENST00000443943 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
AP1S1-203ENST00000443943 CABP2Q9NPB3 220 aa29.97■■■□□ 2.39
AP1S1-203ENST00000443943 NRKQ7Z2Y5 1582 aa29.97■■■□□ 2.39
AP1S1-203ENST00000443943 SPATA31A1Q5TZJ5 1347 aa29.96■■■□□ 2.39
AP1S1-203ENST00000443943 L3MBTL2Q969R5 705 aa29.96■■■□□ 2.39
AP1S1-203ENST00000443943 QRICH2Q9H0J4 1663 aa29.95■■■□□ 2.39
AP1S1-203ENST00000443943 BAG6P46379 1132 aa29.95■■■□□ 2.39
AP1S1-203ENST00000443943 FAM182BQ5T319 152 aa29.95■■■□□ 2.39
AP1S1-203ENST00000443943 USP19O94966 1318 aa29.93■■■□□ 2.38
AP1S1-203ENST00000443943 SSH2Q76I76 1423 aa29.9■■■□□ 2.38
AP1S1-203ENST00000443943 SIN3AQ96ST3 1273 aa29.9■■■□□ 2.38
AP1S1-203ENST00000443943 CPDO75976 1380 aa29.9■■■□□ 2.38
AP1S1-203ENST00000443943 NLRP13Q86W25 1043 aa29.89■■■□□ 2.38
AP1S1-203ENST00000443943 EVA1CP58658 441 aa29.88■■■□□ 2.37
AP1S1-203ENST00000443943 USP35Q9P2H5 1018 aa29.88■■■□□ 2.37
AP1S1-203ENST00000443943 CAMTA1Q9Y6Y1 1673 aa29.87■■■□□ 2.37
AP1S1-203ENST00000443943 RGPD1P0DJD0 1748 aa29.87■■■□□ 2.37
AP1S1-203ENST00000443943 BRD4O60885 1362 aaPredicted RBP29.87■■■□□ 2.37
AP1S1-203ENST00000443943 TRPM1Q7Z4N2 1603 aa29.86■■■□□ 2.37
AP1S1-203ENST00000443943 CABP1Q9NZU7 370 aa29.86■■■□□ 2.37
AP1S1-203ENST00000443943 USP6P35125 1406 aa29.86■■■□□ 2.37
AP1S1-203ENST00000443943 GCP02774 474 aa29.85■■■□□ 2.37
AP1S1-203ENST00000443943 NEUROD1Q13562 356 aa29.85■■■□□ 2.37
AP1S1-203ENST00000443943 LMO7Q8WWI1 1683 aa29.85■■■□□ 2.37
AP1S1-203ENST00000443943 EN1Q05925 392 aaPredicted RBP29.84■■■□□ 2.37
AP1S1-203ENST00000443943 ROCK2O75116 1388 aaKnown RBP29.84■■■□□ 2.37
AP1S1-203ENST00000443943 LARP1Q6PKG0 1096 aaKnown RBP29.83■■■□□ 2.37
AP1S1-203ENST00000443943 EVC2Q86UK5 1308 aa29.82■■■□□ 2.36
AP1S1-203ENST00000443943 BARGINQ6ZT62 677 aa29.82■■■□□ 2.36
AP1S1-203ENST00000443943 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
AP1S1-203ENST00000443943 TNS1Q9HBL0 1735 aaKnown RBP29.8■■■□□ 2.36
AP1S1-203ENST00000443943 PSDA5PKW4 1024 aaPredicted RBP29.8■■■□□ 2.36
AP1S1-203ENST00000443943 FAM196AQ6ZSG2 479 aa29.79■■■□□ 2.36
AP1S1-203ENST00000443943 TCP11L2Q8N4U5 519 aa29.79■■■□□ 2.36
AP1S1-203ENST00000443943 ZBTB7CA1YPR0 619 aa29.78■■■□□ 2.36
AP1S1-203ENST00000443943 NLRP6P59044 892 aa29.78■■■□□ 2.36
AP1S1-203ENST00000443943 COL5A2P05997 1499 aaPredicted RBP29.78■■■□□ 2.36
AP1S1-203ENST00000443943 TRIM37O94972 964 aa29.77■■■□□ 2.36
AP1S1-203ENST00000443943 SLIT3O75094 1523 aa29.76■■■□□ 2.36
AP1S1-203ENST00000443943 PDE3BQ13370 1112 aa29.76■■■□□ 2.35
AP1S1-203ENST00000443943 THRAP3Q9Y2W1 955 aaKnown RBP29.73■■■□□ 2.35
AP1S1-203ENST00000443943 LRP5O75197 1615 aa29.73■■■□□ 2.35
AP1S1-203ENST00000443943 PIK3C2AO00443 1686 aa29.72■■■□□ 2.35
AP1S1-203ENST00000443943 EZH2Q15910 746 aaKnown RBP29.72■■■□□ 2.35
AP1S1-203ENST00000443943 AATKQ6ZMQ8 1374 aa29.72■■■□□ 2.35
AP1S1-203ENST00000443943 CRB1P82279 1406 aa29.71■■■□□ 2.35
AP1S1-203ENST00000443943 APBA3O96018 575 aa29.69■■■□□ 2.34
AP1S1-203ENST00000443943 R3HDM1Q15032 1099 aaKnown RBP29.68■■■□□ 2.34
AP1S1-203ENST00000443943 CAMKK2Q96RR4 588 aa29.68■■■□□ 2.34
AP1S1-203ENST00000443943 TTC21BQ7Z4L5 1316 aa29.68■■■□□ 2.34
AP1S1-203ENST00000443943 ZNF692Q9BU19 519 aaPredicted RBP29.67■■■□□ 2.34
AP1S1-203ENST00000443943 PARD3Q8TEW0 1356 aa29.65■■■□□ 2.34
AP1S1-203ENST00000443943 PARP4Q9UKK3 1724 aaKnown RBP29.65■■■□□ 2.34
AP1S1-203ENST00000443943 CPSF1Q10570 1443 aaKnown RBP29.65■■■□□ 2.34
AP1S1-203ENST00000443943 TTC21AQ8NDW8 1320 aa29.63■■■□□ 2.33
AP1S1-203ENST00000443943 AKAP12Q02952 1782 aa29.62■■■□□ 2.33
AP1S1-203ENST00000443943 SOX12O15370 315 aa29.62■■■□□ 2.33
AP1S1-203ENST00000443943 TOM1L2Q6ZVM7 507 aa29.62■■■□□ 2.33
AP1S1-203ENST00000443943 KTN1Q86UP2 1357 aaKnown RBP29.62■■■□□ 2.33
AP1S1-203ENST00000443943 SBNO2Q9Y2G9 1366 aa29.62■■■□□ 2.33
AP1S1-203ENST00000443943 KCNH5Q8NCM2 988 aa29.61■■■□□ 2.33
AP1S1-203ENST00000443943 COL18A1P39060 1754 aa29.6■■■□□ 2.33
AP1S1-203ENST00000443943 CARD11Q9BXL7 1154 aa29.6■■■□□ 2.33
AP1S1-203ENST00000443943 AXIN2Q9Y2T1 843 aa29.6■■■□□ 2.33
AP1S1-203ENST00000443943 ARHGEF25Q86VW2 580 aa29.59■■■□□ 2.33
AP1S1-203ENST00000443943 WDR17Q8IZU2 1322 aa29.59■■■□□ 2.33
AP1S1-203ENST00000443943 OVOS2A0A0G2JMS6 1433 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms