RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 USP6P35125 1406 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 CC2D1BQ5T0F9 858 aaKnown RBP3.74□□□□□ -1.81
LINC00393-201ENST00000443621 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 TRMT2AQ8IZ69 625 aaKnown RBP3.74□□□□□ -1.81
LINC00393-201ENST00000443621 FAM9BQ8IZU0 186 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 RUNDC1Q96C34 613 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 POLR3GLQ9BT43 218 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 ADGRL3Q9HAR2 1447 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 CABP2Q9NPB3 220 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 CABP1Q9NZU7 370 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 GTF3C3Q9Y5Q9 886 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 KIF1AQ12756 1690 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 COL3A1P02461 1466 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 IL16Q14005 1332 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 TTC21BQ7Z4L5 1316 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 OVOS2A0A0J9YW53 1432 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 OVOS2Q6IE36 1432 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 MAP2P11137 1827 aaKnown RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 E9PSI1 815 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 CEBPAP49715 358 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 HAP1P54257 671 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 CALD1Q05682 793 aaKnown RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 GOLGA2Q08379 1002 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 CCDC184Q52MB2 194 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 WAPLQ7Z5K2 1190 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 YTHDC1Q96MU7 727 aaKnown RBP3.73□□□□□ -1.81
LINC00393-201ENST00000443621 STK26Q9P289 416 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 ADAMTS8Q9UP79 889 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 DMRT2Q9Y5R5 561 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 ABCC6O95255 1503 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 LMTK3Q96Q04 1460 aa3.73□□□□□ -1.81
LINC00393-201ENST00000443621 MINK1Q8N4C8 1332 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-201ENST00000443621 MTHFSP49914 203 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-201ENST00000443621 BCANQ96GW7 911 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 COG3Q96JB2 828 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 CHMP4AQ9BY43 222 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 C19orf44Q9H6X5 657 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 RTL1A6NKG5 1358 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 PLEKHH1Q9ULM0 1364 aa3.72□□□□□ -1.81
LINC00393-201ENST00000443621 ACEP12821 1306 aa3.71□□□□□ -1.81
LINC00393-201ENST00000443621 SOS1Q07889 1333 aaPredicted RBP3.71□□□□□ -1.81
LINC00393-201ENST00000443621 HTATSF1O43719 755 aaKnown RBP3.71□□□□□ -1.82
LINC00393-201ENST00000443621 DIAPH1O60610 1272 aaKnown RBP3.71□□□□□ -1.82
LINC00393-201ENST00000443621 NEFMP07197 916 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 MS4A1P11836 297 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 BRPF1P55201 1214 aaPredicted RBP3.71□□□□□ -1.82
LINC00393-201ENST00000443621 SLFN5Q08AF3 891 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 LMOD3Q0VAK6 560 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 NUTM2DQ5VT03 806 aaPredicted RBP3.71□□□□□ -1.82
LINC00393-201ENST00000443621 KCNH5Q8NCM2 988 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 SLC26A8Q96RN1 970 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 BABAM1Q9NWV8 329 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 POLKQ9UBT6 870 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 KDRP35968 1356 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 IQSEC2Q5JU85 1478 aa3.71□□□□□ -1.82
LINC00393-201ENST00000443621 PRR36Q9H6K5 1346 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 RGPD1P0DJD0 1748 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 PDE3AQ14432 1141 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 DUSP27Q5VZP5 1158 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 CADPS2Q86UW7 1296 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 PLEKHF1Q96S99 279 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 MYH16Q9H6N6 1097 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 PPP4R2Q9NY27 417 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 SBNO1A3KN83 1393 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 FLT4P35916 1363 aa3.7□□□□□ -1.82
LINC00393-201ENST00000443621 RGPD8O14715 1765 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-201ENST00000443621 PIK3C2AO00443 1686 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 MED1Q15648 1581 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-201ENST00000443621 ARHGEF10O15013 1369 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 IL13P35225 146 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 PSME1Q06323 249 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 ERICH6Q7L0X2 663 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 WWC1Q8IX03 1113 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 TCP11L2Q8N4U5 519 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 NGDNQ8NEJ9 315 aaKnown RBP3.69□□□□□ -1.82
LINC00393-201ENST00000443621 CHMP4BQ9H444 224 aaKnown RBP3.69□□□□□ -1.82
LINC00393-201ENST00000443621 RCAN3Q9UKA8 241 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 PHF8Q9UPP1 1060 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 SUPT16HQ9Y5B9 1047 aaKnown RBP3.69□□□□□ -1.82
LINC00393-201ENST00000443621 SLIT3O75094 1523 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 NCAPD2Q15021 1401 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 MAPK8IP3Q9UPT6 1336 aa3.69□□□□□ -1.82
LINC00393-201ENST00000443621 STRCQ7RTU9 1775 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 ALS2Q96Q42 1657 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 FAM208AQ9UK61 1670 aaKnown RBP3.68□□□□□ -1.82
LINC00393-201ENST00000443621 C1orf167Q5SNV9 1468 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 TRPM3Q9HCF6 1732 aaPredicted RBP3.68□□□□□ -1.82
LINC00393-201ENST00000443621 MARF1Q9Y4F3 1742 aaKnown RBP3.68□□□□□ -1.82
LINC00393-201ENST00000443621 APAF1O14727 1248 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 TMPOP42166 694 aaKnown RBP3.68□□□□□ -1.82
LINC00393-201ENST00000443621 SAFB2Q14151 953 aaKnown RBP eCLIP3.68□□□□□ -1.82
LINC00393-201ENST00000443621 ALDH1L2Q3SY69 923 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 RSPH6AQ9H0K4 717 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 GGNBP2Q9H3C7 697 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 CACNA1FO60840 1977 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 OVOS2A0A0G2JMS6 1433 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 USP19O94966 1318 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 NPHP3Q7Z494 1330 aa3.68□□□□□ -1.82
LINC00393-201ENST00000443621 IGSF1Q8N6C5 1336 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms