RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PRR36Q9H6K5 1346 aa20.08■□□□□ 0.81
PTPRE-203ENST00000442830 FAM83GA6ND36 823 aa20.07■□□□□ 0.8
PTPRE-203ENST00000442830 KRT27Q7Z3Y8 459 aa20.06■□□□□ 0.8
PTPRE-203ENST00000442830 TOPAZ1Q8N9V7 1692 aa20.05■□□□□ 0.8
PTPRE-203ENST00000442830 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
PTPRE-203ENST00000442830 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
PTPRE-203ENST00000442830 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
PTPRE-203ENST00000442830 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
PTPRE-203ENST00000442830 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
PTPRE-203ENST00000442830 A0A0G2JS52 829 aa20.02■□□□□ 0.8
PTPRE-203ENST00000442830 MYT1Q01538 1121 aa20.02■□□□□ 0.8
PTPRE-203ENST00000442830 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.79
PTPRE-203ENST00000442830 POLR3AO14802 1390 aaPredicted RBP20.01■□□□□ 0.79
PTPRE-203ENST00000442830 PRDM11Q9NQV5 511 aa20.01■□□□□ 0.79
PTPRE-203ENST00000442830 RGPD1P0DJD0 1748 aa20.01■□□□□ 0.79
PTPRE-203ENST00000442830 CCDC61Q9Y6R9 512 aa20■□□□□ 0.79
PTPRE-203ENST00000442830 BAG6P46379 1132 aa19.99■□□□□ 0.79
PTPRE-203ENST00000442830 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
PTPRE-203ENST00000442830 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
PTPRE-203ENST00000442830 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
PTPRE-203ENST00000442830 BRD4O60885 1362 aaPredicted RBP19.98■□□□□ 0.79
PTPRE-203ENST00000442830 THSD7AQ9UPZ6 1657 aa19.98■□□□□ 0.79
PTPRE-203ENST00000442830 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
PTPRE-203ENST00000442830 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
PTPRE-203ENST00000442830 ACEP12821 1306 aa19.95■□□□□ 0.78
PTPRE-203ENST00000442830 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
PTPRE-203ENST00000442830 NBPF8Q3BBV2 869 aa19.93■□□□□ 0.78
PTPRE-203ENST00000442830 DEFB132Q7Z7B7 95 aa19.93■□□□□ 0.78
PTPRE-203ENST00000442830 LRP5O75197 1615 aa19.93■□□□□ 0.78
PTPRE-203ENST00000442830 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
PTPRE-203ENST00000442830 QRICH2Q9H0J4 1663 aa19.93■□□□□ 0.78
PTPRE-203ENST00000442830 SPATA31A1Q5TZJ5 1347 aa19.92■□□□□ 0.78
PTPRE-203ENST00000442830 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
PTPRE-203ENST00000442830 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
PTPRE-203ENST00000442830 CPDO75976 1380 aa19.91■□□□□ 0.78
PTPRE-203ENST00000442830 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
PTPRE-203ENST00000442830 ABTB2Q8N961 1025 aa19.9■□□□□ 0.78
PTPRE-203ENST00000442830 PPIP5K1Q6PFW1 1433 aa19.9■□□□□ 0.78
PTPRE-203ENST00000442830 USP19O94966 1318 aa19.89■□□□□ 0.77
PTPRE-203ENST00000442830 NLRP13Q86W25 1043 aa19.89■□□□□ 0.77
PTPRE-203ENST00000442830 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
PTPRE-203ENST00000442830 EVA1CP58658 441 aa19.88■□□□□ 0.77
PTPRE-203ENST00000442830 SSH2Q76I76 1423 aa19.87■□□□□ 0.77
PTPRE-203ENST00000442830 ZC3H6P61129 1189 aaKnown RBP19.87■□□□□ 0.77
PTPRE-203ENST00000442830 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
PTPRE-203ENST00000442830 FAM196AQ6ZSG2 479 aa19.87■□□□□ 0.77
PTPRE-203ENST00000442830 BARGINQ6ZT62 677 aa19.87■□□□□ 0.77
PTPRE-203ENST00000442830 LMO7Q8WWI1 1683 aa19.87■□□□□ 0.77
PTPRE-203ENST00000442830 C11orf95C9JLR9 678 aaPredicted RBP19.86■□□□□ 0.77
PTPRE-203ENST00000442830 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
PTPRE-203ENST00000442830 STRN4Q9NRL3 753 aa19.86■□□□□ 0.77
PTPRE-203ENST00000442830 THRAP3Q9Y2W1 955 aaKnown RBP19.86■□□□□ 0.77
PTPRE-203ENST00000442830 PARD3Q8TEW0 1356 aa19.85■□□□□ 0.77
PTPRE-203ENST00000442830 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
PTPRE-203ENST00000442830 NUTM2GQ5VZR2 741 aa19.84■□□□□ 0.77
PTPRE-203ENST00000442830 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
PTPRE-203ENST00000442830 CAMTA1Q9Y6Y1 1673 aa19.82■□□□□ 0.76
PTPRE-203ENST00000442830 PDE3BQ13370 1112 aa19.82■□□□□ 0.76
PTPRE-203ENST00000442830 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
PTPRE-203ENST00000442830 USP6P35125 1406 aa19.82■□□□□ 0.76
PTPRE-203ENST00000442830 GCP02774 474 aa19.81■□□□□ 0.76
PTPRE-203ENST00000442830 PARP4Q9UKK3 1724 aaKnown RBP19.81■□□□□ 0.76
PTPRE-203ENST00000442830 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
PTPRE-203ENST00000442830 CABP2Q9NPB3 220 aa19.8■□□□□ 0.76
PTPRE-203ENST00000442830 SLIT3O75094 1523 aa19.8■□□□□ 0.76
PTPRE-203ENST00000442830 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
PTPRE-203ENST00000442830 COL5A2P05997 1499 aaPredicted RBP19.79■□□□□ 0.76
PTPRE-203ENST00000442830 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
PTPRE-203ENST00000442830 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
PTPRE-203ENST00000442830 CRB1P82279 1406 aa19.77■□□□□ 0.76
PTPRE-203ENST00000442830 LARP1Q6PKG0 1096 aaKnown RBP19.77■□□□□ 0.76
PTPRE-203ENST00000442830 USP35Q9P2H5 1018 aa19.77■□□□□ 0.76
PTPRE-203ENST00000442830 AATKQ6ZMQ8 1374 aa19.77■□□□□ 0.76
PTPRE-203ENST00000442830 AKAP12Q02952 1782 aa19.77■□□□□ 0.76
PTPRE-203ENST00000442830 NLRP6P59044 892 aa19.76■□□□□ 0.75
PTPRE-203ENST00000442830 FAM182BQ5T319 152 aa19.76■□□□□ 0.75
PTPRE-203ENST00000442830 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
PTPRE-203ENST00000442830 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
PTPRE-203ENST00000442830 RREB1Q92766 1687 aa19.75■□□□□ 0.75
PTPRE-203ENST00000442830 TRIM37O94972 964 aa19.75■□□□□ 0.75
PTPRE-203ENST00000442830 PSDA5PKW4 1024 aaPredicted RBP19.74■□□□□ 0.75
PTPRE-203ENST00000442830 TTC21AQ8NDW8 1320 aa19.74■□□□□ 0.75
PTPRE-203ENST00000442830 APBA3O96018 575 aa19.73■□□□□ 0.75
PTPRE-203ENST00000442830 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
PTPRE-203ENST00000442830 CAMKK2Q96RR4 588 aa19.73■□□□□ 0.75
PTPRE-203ENST00000442830 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
PTPRE-203ENST00000442830 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
PTPRE-203ENST00000442830 ABCC6O95255 1503 aa19.72■□□□□ 0.75
PTPRE-203ENST00000442830 WNK3Q9BYP7 1800 aa19.72■□□□□ 0.75
PTPRE-203ENST00000442830 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
PTPRE-203ENST00000442830 SBNO2Q9Y2G9 1366 aa19.71■□□□□ 0.75
PTPRE-203ENST00000442830 OVOS2A0A0G2JMS6 1433 aa19.71■□□□□ 0.75
PTPRE-203ENST00000442830 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
PTPRE-203ENST00000442830 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
PTPRE-203ENST00000442830 CDCA7Q9BWT1 371 aaPredicted RBP19.71■□□□□ 0.75
PTPRE-203ENST00000442830 COL18A1P39060 1754 aa19.7■□□□□ 0.74
PTPRE-203ENST00000442830 R3HDM1Q15032 1099 aaKnown RBP19.7■□□□□ 0.74
PTPRE-203ENST00000442830 NBPF14Q5TI25 921 aa19.7■□□□□ 0.74
PTPRE-203ENST00000442830 NUP188Q5SRE5 1749 aa19.7■□□□□ 0.74
PTPRE-203ENST00000442830 CPSF1Q10570 1443 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms