RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 USP6P35125 1406 aa24.94■■□□□ 1.58
POLR1E-203ENST00000442009 NME9Q86XW9 330 aa24.94■■□□□ 1.58
POLR1E-203ENST00000442009 ZNF521Q96K83 1311 aa24.93■■□□□ 1.58
POLR1E-203ENST00000442009 MAP2P11137 1827 aaKnown RBP24.92■■□□□ 1.58
POLR1E-203ENST00000442009 TTC21BQ7Z4L5 1316 aa24.91■■□□□ 1.58
POLR1E-203ENST00000442009 SALL2Q9Y467 1007 aaPredicted RBP24.91■■□□□ 1.58
POLR1E-203ENST00000442009 AATKQ6ZMQ8 1374 aa24.91■■□□□ 1.58
POLR1E-203ENST00000442009 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
POLR1E-203ENST00000442009 ZRANB1Q9UGI0 708 aa24.9■■□□□ 1.58
POLR1E-203ENST00000442009 POLKQ9UBT6 870 aa24.89■■□□□ 1.58
POLR1E-203ENST00000442009 FKBP8Q14318 412 aa24.89■■□□□ 1.57
POLR1E-203ENST00000442009 CCDC146Q8IYE0 955 aa24.89■■□□□ 1.57
POLR1E-203ENST00000442009 NGEFQ8N5V2 710 aa24.89■■□□□ 1.57
POLR1E-203ENST00000442009 APAF1O14727 1248 aa24.86■■□□□ 1.57
POLR1E-203ENST00000442009 CDCA7LQ96GN5 454 aa24.86■■□□□ 1.57
POLR1E-203ENST00000442009 NEFLP07196 543 aa24.86■■□□□ 1.57
POLR1E-203ENST00000442009 COG3Q96JB2 828 aa24.86■■□□□ 1.57
POLR1E-203ENST00000442009 RNF123Q5XPI4 1314 aa24.85■■□□□ 1.57
POLR1E-203ENST00000442009 OVOS2A0A0J9YW53 1432 aa24.85■■□□□ 1.57
POLR1E-203ENST00000442009 OVOS2Q6IE36 1432 aa24.85■■□□□ 1.57
POLR1E-203ENST00000442009 PMFBP1Q8TBY8 1022 aa24.85■■□□□ 1.57
POLR1E-203ENST00000442009 FBLN1P23142 703 aa24.84■■□□□ 1.57
POLR1E-203ENST00000442009 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
POLR1E-203ENST00000442009 TTC21AQ8NDW8 1320 aa24.83■■□□□ 1.57
POLR1E-203ENST00000442009 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.56
POLR1E-203ENST00000442009 RBM33Q96EV2 1170 aaKnown RBP24.82■■□□□ 1.56
POLR1E-203ENST00000442009 NGDNQ8NEJ9 315 aaKnown RBP24.81■■□□□ 1.56
POLR1E-203ENST00000442009 LMTK3Q96Q04 1460 aa24.81■■□□□ 1.56
POLR1E-203ENST00000442009 USP31Q70CQ4 1352 aa24.81■■□□□ 1.56
POLR1E-203ENST00000442009 CDK12Q9NYV4 1490 aaPredicted RBP24.8■■□□□ 1.56
POLR1E-203ENST00000442009 NCBP3Q53F19 620 aaKnown RBP24.8■■□□□ 1.56
POLR1E-203ENST00000442009 DIAPH1O60610 1272 aaKnown RBP24.79■■□□□ 1.56
POLR1E-203ENST00000442009 U2AF1L5P0DN76 240 aaPredicted RBP24.79■■□□□ 1.56
POLR1E-203ENST00000442009 U2AF1Q01081 240 aaKnown RBP eCLIP24.79■■□□□ 1.56
POLR1E-203ENST00000442009 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
POLR1E-203ENST00000442009 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
POLR1E-203ENST00000442009 HSPA2P54652 639 aa24.78■■□□□ 1.56
POLR1E-203ENST00000442009 EMILIN1Q9Y6C2 1016 aa24.78■■□□□ 1.56
POLR1E-203ENST00000442009 TRMT2AQ8IZ69 625 aaKnown RBP24.77■■□□□ 1.56
POLR1E-203ENST00000442009 GOLGA2Q08379 1002 aa24.77■■□□□ 1.56
POLR1E-203ENST00000442009 TCP11L2Q8N4U5 519 aa24.77■■□□□ 1.56
POLR1E-203ENST00000442009 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
POLR1E-203ENST00000442009 PIK3C2AO00443 1686 aa24.77■■□□□ 1.56
POLR1E-203ENST00000442009 USP54Q70EL1 1684 aa24.76■■□□□ 1.55
POLR1E-203ENST00000442009 PROSER2Q86WR7 435 aaPredicted RBP24.75■■□□□ 1.55
POLR1E-203ENST00000442009 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
POLR1E-203ENST00000442009 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
POLR1E-203ENST00000442009 SLFN5Q08AF3 891 aa24.75■■□□□ 1.55
POLR1E-203ENST00000442009 DUSP27Q5VZP5 1158 aa24.75■■□□□ 1.55
POLR1E-203ENST00000442009 ERICH6BQ5W0A0 696 aa24.74■■□□□ 1.55
POLR1E-203ENST00000442009 U2SURPO15042 1029 aaKnown RBP24.72■■□□□ 1.55
POLR1E-203ENST00000442009 IL13P35225 146 aa24.72■■□□□ 1.55
POLR1E-203ENST00000442009 CCDC27Q2M243 656 aa24.72■■□□□ 1.55
POLR1E-203ENST00000442009 WWC1Q8IX03 1113 aa24.72■■□□□ 1.55
POLR1E-203ENST00000442009 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
POLR1E-203ENST00000442009 NCOA3Q9Y6Q9 1424 aa24.72■■□□□ 1.55
POLR1E-203ENST00000442009 RRS1Q15050 365 aaKnown RBP24.72■■□□□ 1.55
POLR1E-203ENST00000442009 PPM1GO15355 546 aaPredicted RBP24.71■■□□□ 1.55
POLR1E-203ENST00000442009 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.55
POLR1E-203ENST00000442009 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.55
POLR1E-203ENST00000442009 FCHSD2O94868 740 aa24.7■■□□□ 1.54
POLR1E-203ENST00000442009 SPINK5Q9NQ38 1064 aaPredicted RBP24.7■■□□□ 1.54
POLR1E-203ENST00000442009 LRRC7Q96NW7 1537 aa24.7■■□□□ 1.54
POLR1E-203ENST00000442009 DMRT2Q9Y5R5 561 aa24.69■■□□□ 1.54
POLR1E-203ENST00000442009 PEAK1Q9H792 1746 aa24.68■■□□□ 1.54
POLR1E-203ENST00000442009 C14orf37Q86TY3 774 aa24.68■■□□□ 1.54
POLR1E-203ENST00000442009 IRX6P78412 446 aaPredicted RBP24.68■■□□□ 1.54
POLR1E-203ENST00000442009 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
POLR1E-203ENST00000442009 E9PSI1 815 aa24.66■■□□□ 1.54
POLR1E-203ENST00000442009 ESCO1Q5FWF5 840 aa24.66■■□□□ 1.54
POLR1E-203ENST00000442009 RSPH6AQ9H0K4 717 aa24.66■■□□□ 1.54
POLR1E-203ENST00000442009 PNNQ9H307 717 aaKnown RBP24.66■■□□□ 1.54
POLR1E-203ENST00000442009 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
POLR1E-203ENST00000442009 WDR63Q8IWG1 891 aa24.65■■□□□ 1.54
POLR1E-203ENST00000442009 DCCP43146 1447 aa24.65■■□□□ 1.54
POLR1E-203ENST00000442009 ORAI2Q96SN7 254 aa24.63■■□□□ 1.53
POLR1E-203ENST00000442009 C1orf167Q5SNV9 1468 aa24.63■■□□□ 1.53
POLR1E-203ENST00000442009 TMPOP42166 694 aaKnown RBP24.63■■□□□ 1.53
POLR1E-203ENST00000442009 NLRP6P59044 892 aa24.63■■□□□ 1.53
POLR1E-203ENST00000442009 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
POLR1E-203ENST00000442009 MAP3K19Q56UN5 1328 aa24.62■■□□□ 1.53
POLR1E-203ENST00000442009 ABTB2Q8N961 1025 aa24.61■■□□□ 1.53
POLR1E-203ENST00000442009 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
POLR1E-203ENST00000442009 KIF1AQ12756 1690 aa24.6■■□□□ 1.53
POLR1E-203ENST00000442009 RRP1P56182 461 aaKnown RBP24.6■■□□□ 1.53
POLR1E-203ENST00000442009 RGPD1P0DJD0 1748 aa24.6■■□□□ 1.53
POLR1E-203ENST00000442009 PSME1Q06323 249 aa24.59■■□□□ 1.53
POLR1E-203ENST00000442009 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
POLR1E-203ENST00000442009 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
POLR1E-203ENST00000442009 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
POLR1E-203ENST00000442009 SBNO1A3KN83 1393 aa24.59■■□□□ 1.53
POLR1E-203ENST00000442009 MST1RQ04912 1400 aa24.59■■□□□ 1.53
POLR1E-203ENST00000442009 KIF24Q5T7B8 1368 aa24.58■■□□□ 1.53
POLR1E-203ENST00000442009 PRKAR2BP31323 418 aa24.58■■□□□ 1.53
POLR1E-203ENST00000442009 HSP90AB2PQ58FF8 381 aa24.58■■□□□ 1.53
POLR1E-203ENST00000442009 TRPM3Q9HCF6 1732 aaPredicted RBP24.56■■□□□ 1.52
POLR1E-203ENST00000442009 PAK3O75914 559 aaPredicted RBP24.56■■□□□ 1.52
POLR1E-203ENST00000442009 FLT4P35916 1363 aa24.56■■□□□ 1.52
POLR1E-203ENST00000442009 FOXO3O43524 673 aa24.56■■□□□ 1.52
POLR1E-203ENST00000442009 HMOX1P09601 288 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms