RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-215	ENST00000441728	TRPM3	Q9HCF6	1732 aa	Predicted RBP	29.14	■■■□□ 2.26
UBE2F-215	ENST00000441728	COL14A1	Q05707	1796 aa	Known RBP	29.14	■■■□□ 2.26
UBE2F-215	ENST00000441728	PRR36	Q9H6K5	1346 aa		29.13	■■■□□ 2.25
UBE2F-215	ENST00000441728	PRDM11	Q9NQV5	511 aa		29.12	■■■□□ 2.25
UBE2F-215	ENST00000441728	ALS2	Q96Q42	1657 aa		29.11	■■■□□ 2.25
UBE2F-215	ENST00000441728	NRAP	Q86VF7	1730 aa		29.11	■■■□□ 2.25
UBE2F-215	ENST00000441728	ITSN1	Q15811	1721 aa		29.08	■■■□□ 2.25
UBE2F-215	ENST00000441728	NUDT16	Q96DE0	195 aa	Known RBP	29.05	■■■□□ 2.24
UBE2F-215	ENST00000441728	SPATA31A5	Q5VU36	1347 aa		29.04	■■■□□ 2.24
UBE2F-215	ENST00000441728	SPATA31A7	Q8IWB4	1347 aa		29.04	■■■□□ 2.24
UBE2F-215	ENST00000441728	SRCAP	Q6ZRS2	3230 aa		29.03	■■■□□ 2.24
UBE2F-215	ENST00000441728	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.02	■■■□□ 2.24
UBE2F-215	ENST00000441728	PSD	A5PKW4	1024 aa	Predicted RBP	29.01	■■■□□ 2.23
UBE2F-215	ENST00000441728	STRN4	Q9NRL3	753 aa		29.01	■■■□□ 2.23
UBE2F-215	ENST00000441728	ATP7B	P35670	1465 aa		28.99	■■■□□ 2.23
UBE2F-215	ENST00000441728	FAM182B	Q5T319	152 aa		28.99	■■■□□ 2.23
UBE2F-215	ENST00000441728	CDK19	Q9BWU1	502 aa		28.99	■■■□□ 2.23
UBE2F-215	ENST00000441728	RGPD1	P0DJD0	1748 aa		28.99	■■■□□ 2.23
UBE2F-215	ENST00000441728	KIAA0232	Q92628	1395 aa		28.99	■■■□□ 2.23
UBE2F-215	ENST00000441728	HRC	P23327	699 aa		28.98	■■■□□ 2.23
UBE2F-215	ENST00000441728	EVA1C	P58658	441 aa		28.98	■■■□□ 2.23
UBE2F-215	ENST00000441728	EN1	Q05925	392 aa	Predicted RBP	28.98	■■■□□ 2.23
UBE2F-215	ENST00000441728	CHRNA2	Q15822	529 aa		28.98	■■■□□ 2.23
UBE2F-215	ENST00000441728	ZC3H6	P61129	1189 aa	Known RBP	28.97	■■■□□ 2.23
UBE2F-215	ENST00000441728	NUTM2G	Q5VZR2	741 aa		28.97	■■■□□ 2.23
UBE2F-215	ENST00000441728	CRYBG1	Q9Y4K1	1723 aa		28.96	■■■□□ 2.23
UBE2F-215	ENST00000441728	CCDC61	Q9Y6R9	512 aa		28.94	■■■□□ 2.22
UBE2F-215	ENST00000441728	SPATA31A1	Q5TZJ5	1347 aa		28.94	■■■□□ 2.22
UBE2F-215	ENST00000441728	USP35	Q9P2H5	1018 aa		28.93	■■■□□ 2.22
UBE2F-215	ENST00000441728	LRP5	O75197	1615 aa		28.93	■■■□□ 2.22
UBE2F-215	ENST00000441728	ACE	P12821	1306 aa		28.93	■■■□□ 2.22
UBE2F-215	ENST00000441728	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.92	■■■□□ 2.22
UBE2F-215	ENST00000441728	THSD7A	Q9UPZ6	1657 aa		28.91	■■■□□ 2.22
UBE2F-215	ENST00000441728	ABTB2	Q8N961	1025 aa		28.91	■■■□□ 2.22
UBE2F-215	ENST00000441728	NBPF8	Q3BBV2	869 aa		28.9	■■■□□ 2.22
UBE2F-215	ENST00000441728	FAM196A	Q6ZSG2	479 aa		28.9	■■■□□ 2.22
UBE2F-215	ENST00000441728	SRPK2	P78362	688 aa	Known RBP	28.89	■■■□□ 2.22
UBE2F-215	ENST00000441728	PDE3B	Q13370	1112 aa		28.89	■■■□□ 2.22
UBE2F-215	ENST00000441728	POLR3A	O14802	1390 aa	Predicted RBP	28.88	■■■□□ 2.21
UBE2F-215	ENST00000441728	TRIM37	O94972	964 aa		28.87	■■■□□ 2.21
UBE2F-215	ENST00000441728	R3HDM1	Q15032	1099 aa	Known RBP	28.87	■■■□□ 2.21
UBE2F-215	ENST00000441728	KIAA1210	Q9ULL0	1709 aa		28.86	■■■□□ 2.21
UBE2F-215	ENST00000441728	PLEKHG3	A1L390	1219 aa		28.85	■■■□□ 2.21
UBE2F-215	ENST00000441728	TOPAZ1	Q8N9V7	1692 aa		28.84	■■■□□ 2.21
UBE2F-215	ENST00000441728	EZH2	Q15910	746 aa	Known RBP	28.84	■■■□□ 2.21
UBE2F-215	ENST00000441728	NLRP13	Q86W25	1043 aa		28.84	■■■□□ 2.21
UBE2F-215	ENST00000441728	DISP2	A7MBM2	1401 aa		28.84	■■■□□ 2.21
UBE2F-215	ENST00000441728	APBA3	O96018	575 aa		28.83	■■■□□ 2.21
UBE2F-215	ENST00000441728	SSH2	Q76I76	1423 aa		28.83	■■■□□ 2.21
UBE2F-215	ENST00000441728	TNS1	Q9HBL0	1735 aa	Known RBP	28.82	■■■□□ 2.2
UBE2F-215	ENST00000441728	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.81	■■■□□ 2.2
UBE2F-215	ENST00000441728	BARGIN	Q6ZT62	677 aa		28.81	■■■□□ 2.2
UBE2F-215	ENST00000441728	PPIP5K1	Q6PFW1	1433 aa		28.8	■■■□□ 2.2
UBE2F-215	ENST00000441728	ZBTB7C	A1YPR0	619 aa		28.8	■■■□□ 2.2
UBE2F-215	ENST00000441728	TCP11L2	Q8N4U5	519 aa		28.8	■■■□□ 2.2
UBE2F-215	ENST00000441728	NBPF1	Q3BBV0	1214 aa		28.79	■■■□□ 2.2
UBE2F-215	ENST00000441728	NRK	Q7Z2Y5	1582 aa		28.79	■■■□□ 2.2
UBE2F-215	ENST00000441728	LARP1	Q6PKG0	1096 aa	Known RBP	28.78	■■■□□ 2.2
UBE2F-215	ENST00000441728	CPD	O75976	1380 aa		28.77	■■■□□ 2.2
UBE2F-215	ENST00000441728	PARD3	Q8TEW0	1356 aa		28.77	■■■□□ 2.2
UBE2F-215	ENST00000441728	CABP2	Q9NPB3	220 aa		28.76	■■■□□ 2.19
UBE2F-215	ENST00000441728	USP19	O94966	1318 aa		28.75	■■■□□ 2.19
UBE2F-215	ENST00000441728	GC	P02774	474 aa		28.75	■■■□□ 2.19
UBE2F-215	ENST00000441728	CAMKK2	Q96RR4	588 aa		28.75	■■■□□ 2.19
UBE2F-215	ENST00000441728	THRAP3	Q9Y2W1	955 aa	Known RBP	28.75	■■■□□ 2.19
UBE2F-215	ENST00000441728	CAMTA1	Q9Y6Y1	1673 aa		28.74	■■■□□ 2.19
UBE2F-215	ENST00000441728	NBPF14	Q5TI25	921 aa		28.74	■■■□□ 2.19
UBE2F-215	ENST00000441728	BRD4	O60885	1362 aa	Predicted RBP	28.73	■■■□□ 2.19
UBE2F-215	ENST00000441728	NLRP6	P59044	892 aa		28.71	■■■□□ 2.19
UBE2F-215	ENST00000441728	C11orf95	C9JLR9	678 aa	Predicted RBP	28.7	■■■□□ 2.18
UBE2F-215	ENST00000441728	QRICH2	Q9H0J4	1663 aa		28.69	■■■□□ 2.18
UBE2F-215	ENST00000441728	LMO7	Q8WWI1	1683 aa		28.68	■■■□□ 2.18
UBE2F-215	ENST00000441728	CABP1	Q9NZU7	370 aa		28.68	■■■□□ 2.18
UBE2F-215	ENST00000441728	COL5A2	P05997	1499 aa	Predicted RBP	28.66	■■■□□ 2.18
UBE2F-215	ENST00000441728	CRB1	P82279	1406 aa		28.66	■■■□□ 2.18
UBE2F-215	ENST00000441728	USP6	P35125	1406 aa		28.65	■■■□□ 2.18
UBE2F-215	ENST00000441728	EVC2	Q86UK5	1308 aa		28.65	■■■□□ 2.18
UBE2F-215	ENST00000441728	TOM1L2	Q6ZVM7	507 aa		28.64	■■■□□ 2.18
UBE2F-215	ENST00000441728	AATK	Q6ZMQ8	1374 aa		28.61	■■■□□ 2.17
UBE2F-215	ENST00000441728	OVOS2	A0A0G2JMS6	1433 aa		28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	OVOS2	A0A0J9YW53	1432 aa		28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	OVOS2	Q6IE36	1432 aa		28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	PARP4	Q9UKK3	1724 aa	Known RBP	28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	DDB1	Q16531	1140 aa		28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	RREB1	Q92766	1687 aa		28.6	■■■□□ 2.17
UBE2F-215	ENST00000441728	NUP188	Q5SRE5	1749 aa		28.57	■■■□□ 2.16
UBE2F-215	ENST00000441728	L3MBTL2	Q969R5	705 aa		28.57	■■■□□ 2.16
UBE2F-215	ENST00000441728	SLIT3	O75094	1523 aa		28.56	■■■□□ 2.16
UBE2F-215	ENST00000441728	CSB-PGBD3	P0DP91	1061 aa		28.56	■■■□□ 2.16
UBE2F-215	ENST00000441728	KCNH5	Q8NCM2	988 aa		28.56	■■■□□ 2.16
UBE2F-215	ENST00000441728	ZNF692	Q9BU19	519 aa	Predicted RBP	28.56	■■■□□ 2.16
UBE2F-215	ENST00000441728	DCAF8L1	A6NGE4	600 aa		28.55	■■■□□ 2.16
UBE2F-215	ENST00000441728	SOX12	O15370	315 aa		28.55	■■■□□ 2.16
UBE2F-215	ENST00000441728	ROCK2	O75116	1388 aa	Known RBP	28.54	■■■□□ 2.16
UBE2F-215	ENST00000441728	SPON1	Q9HCB6	807 aa		28.54	■■■□□ 2.16
UBE2F-215	ENST00000441728	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.53	■■■□□ 2.16
UBE2F-215	ENST00000441728	WDR17	Q8IZU2	1322 aa		28.52	■■■□□ 2.16
UBE2F-215	ENST00000441728	TRPM1	Q7Z4N2	1603 aa		28.52	■■■□□ 2.16
UBE2F-215	ENST00000441728	NEUROD1	Q13562	356 aa		28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms