RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 TTC21BQ7Z4L5 1316 aa26.24■■□□□ 1.79
APTR-204ENST00000440088 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
APTR-204ENST00000440088 COG3Q96JB2 828 aa26.22■■□□□ 1.79
APTR-204ENST00000440088 SSH2Q76I76 1423 aa26.2■■□□□ 1.78
APTR-204ENST00000440088 STRCP1A6NGW2 1772 aa26.2■■□□□ 1.78
APTR-204ENST00000440088 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
APTR-204ENST00000440088 SHPRHQ149N8 1683 aa26.19■■□□□ 1.78
APTR-204ENST00000440088 TTC21AQ8NDW8 1320 aa26.19■■□□□ 1.78
APTR-204ENST00000440088 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
APTR-204ENST00000440088 NCOA3Q9Y6Q9 1424 aa26.17■■□□□ 1.78
APTR-204ENST00000440088 SENP3-EIF4A1A0A087X0R7 540 aa26.17■■□□□ 1.78
APTR-204ENST00000440088 ZRANB1Q9UGI0 708 aa26.17■■□□□ 1.78
APTR-204ENST00000440088 PHF8Q9UPP1 1060 aa26.16■■□□□ 1.78
APTR-204ENST00000440088 TMEM94Q12767 1356 aa26.15■■□□□ 1.78
APTR-204ENST00000440088 AATKQ6ZMQ8 1374 aa26.15■■□□□ 1.78
APTR-204ENST00000440088 MAP2P11137 1827 aaKnown RBP26.14■■□□□ 1.77
APTR-204ENST00000440088 OVOS2A0A0J9YW53 1432 aa26.13■■□□□ 1.77
APTR-204ENST00000440088 OVOS2Q6IE36 1432 aa26.13■■□□□ 1.77
APTR-204ENST00000440088 POLKQ9UBT6 870 aa26.13■■□□□ 1.77
APTR-204ENST00000440088 PNPLA6Q8IY17 1366 aa26.13■■□□□ 1.77
APTR-204ENST00000440088 ESCO1Q5FWF5 840 aa26.12■■□□□ 1.77
APTR-204ENST00000440088 COL3A1P02461 1466 aaPredicted RBP26.11■■□□□ 1.77
APTR-204ENST00000440088 SALL2Q9Y467 1007 aaPredicted RBP26.1■■□□□ 1.77
APTR-204ENST00000440088 DCCP43146 1447 aa26.1■■□□□ 1.77
APTR-204ENST00000440088 FBLN1P23142 703 aa26.1■■□□□ 1.77
APTR-204ENST00000440088 NUDCQ9Y266 331 aa26.1■■□□□ 1.77
APTR-204ENST00000440088 SMG6Q86US8 1419 aaKnown RBP26.09■■□□□ 1.77
APTR-204ENST00000440088 CCDC146Q8IYE0 955 aa26.09■■□□□ 1.77
APTR-204ENST00000440088 PPM1GO15355 546 aaPredicted RBP26.07■■□□□ 1.76
APTR-204ENST00000440088 ATF3P18847 181 aa26.07■■□□□ 1.76
APTR-204ENST00000440088 USP31Q70CQ4 1352 aa26.07■■□□□ 1.76
APTR-204ENST00000440088 DIAPH1O60610 1272 aaKnown RBP26.06■■□□□ 1.76
APTR-204ENST00000440088 PDE3BQ13370 1112 aa26.06■■□□□ 1.76
APTR-204ENST00000440088 EMILIN1Q9Y6C2 1016 aa26.06■■□□□ 1.76
APTR-204ENST00000440088 PIK3C2AO00443 1686 aa26.06■■□□□ 1.76
APTR-204ENST00000440088 CDK12Q9NYV4 1490 aaPredicted RBP26.05■■□□□ 1.76
APTR-204ENST00000440088 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
APTR-204ENST00000440088 U2AF1L5P0DN76 240 aaPredicted RBP26.05■■□□□ 1.76
APTR-204ENST00000440088 U2AF1Q01081 240 aaKnown RBP eCLIP26.05■■□□□ 1.76
APTR-204ENST00000440088 ORAI2Q96SN7 254 aa26.05■■□□□ 1.76
APTR-204ENST00000440088 PSME1Q06323 249 aa26.04■■□□□ 1.76
APTR-204ENST00000440088 RRS1Q15050 365 aaKnown RBP26.04■■□□□ 1.76
APTR-204ENST00000440088 DMRT2Q9Y5R5 561 aa26.03■■□□□ 1.76
APTR-204ENST00000440088 APAF1O14727 1248 aa26.02■■□□□ 1.76
APTR-204ENST00000440088 U2SURPO15042 1029 aaKnown RBP26.02■■□□□ 1.76
APTR-204ENST00000440088 PAK3O75914 559 aaPredicted RBP26.02■■□□□ 1.76
APTR-204ENST00000440088 CADPS2Q86UW7 1296 aa26.02■■□□□ 1.76
APTR-204ENST00000440088 NGEFQ8N5V2 710 aa26.02■■□□□ 1.76
APTR-204ENST00000440088 RUNDC1Q96C34 613 aa26.02■■□□□ 1.76
APTR-204ENST00000440088 MSH6P52701 1360 aa26.02■■□□□ 1.76
APTR-204ENST00000440088 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
APTR-204ENST00000440088 NLRP6P59044 892 aa26.01■■□□□ 1.75
APTR-204ENST00000440088 KIF1AQ12756 1690 aa26.01■■□□□ 1.75
APTR-204ENST00000440088 MST1RQ04912 1400 aa26■■□□□ 1.75
APTR-204ENST00000440088 ABTB2Q8N961 1025 aa26■■□□□ 1.75
APTR-204ENST00000440088 USP54Q70EL1 1684 aa26■■□□□ 1.75
APTR-204ENST00000440088 XIRP1Q702N8 1843 aaKnown RBP25.99■■□□□ 1.75
APTR-204ENST00000440088 LRRC7Q96NW7 1537 aa25.99■■□□□ 1.75
APTR-204ENST00000440088 FOXO3O43524 673 aa25.98■■□□□ 1.75
APTR-204ENST00000440088 ZNF521Q96K83 1311 aa25.96■■□□□ 1.75
APTR-204ENST00000440088 SOX12O15370 315 aa25.95■■□□□ 1.74
APTR-204ENST00000440088 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
APTR-204ENST00000440088 NUTM2GQ5VZR2 741 aa25.94■■□□□ 1.74
APTR-204ENST00000440088 PNNQ9H307 717 aaKnown RBP25.94■■□□□ 1.74
APTR-204ENST00000440088 IQSEC2Q5JU85 1478 aa25.94■■□□□ 1.74
APTR-204ENST00000440088 TCP11L2Q8N4U5 519 aa25.93■■□□□ 1.74
APTR-204ENST00000440088 SUPT16HQ9Y5B9 1047 aaKnown RBP25.93■■□□□ 1.74
APTR-204ENST00000440088 IL13P35225 146 aa25.93■■□□□ 1.74
APTR-204ENST00000440088 CDCA7LQ96GN5 454 aa25.92■■□□□ 1.74
APTR-204ENST00000440088 FCHSD2O94868 740 aa25.91■■□□□ 1.74
APTR-204ENST00000440088 NEFLP07196 543 aa25.91■■□□□ 1.74
APTR-204ENST00000440088 MAP3K19Q56UN5 1328 aa25.91■■□□□ 1.74
APTR-204ENST00000440088 GOLGA2Q08379 1002 aa25.9■■□□□ 1.74
APTR-204ENST00000440088 PLEKHF1Q96S99 279 aa25.9■■□□□ 1.74
APTR-204ENST00000440088 PEAK1Q9H792 1746 aa25.9■■□□□ 1.74
APTR-204ENST00000440088 KRT28Q7Z3Y7 464 aa25.9■■□□□ 1.74
APTR-204ENST00000440088 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
APTR-204ENST00000440088 SBNO1A3KN83 1393 aa25.89■■□□□ 1.73
APTR-204ENST00000440088 NCBP3Q53F19 620 aaKnown RBP25.88■■□□□ 1.73
APTR-204ENST00000440088 MAPK8IP3Q9UPT6 1336 aa25.88■■□□□ 1.73
APTR-204ENST00000440088 FLT4P35916 1363 aa25.88■■□□□ 1.73
APTR-204ENST00000440088 TRPM3Q9HCF6 1732 aaPredicted RBP25.88■■□□□ 1.73
APTR-204ENST00000440088 KIF24Q5T7B8 1368 aa25.86■■□□□ 1.73
APTR-204ENST00000440088 NEUROD2Q15784 382 aa25.86■■□□□ 1.73
APTR-204ENST00000440088 AMPHP49418 695 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 EIF4A2Q14240 407 aaKnown RBP25.85■■□□□ 1.73
APTR-204ENST00000440088 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 RSPH6AQ9H0K4 717 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 RRP7AQ9Y3A4 280 aaKnown RBP25.85■■□□□ 1.73
APTR-204ENST00000440088 NPHP3Q7Z494 1330 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 CCDC27Q2M243 656 aa25.85■■□□□ 1.73
APTR-204ENST00000440088 KCNH5Q8NCM2 988 aa25.84■■□□□ 1.73
APTR-204ENST00000440088 NEFMP07197 916 aa25.83■■□□□ 1.73
APTR-204ENST00000440088 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
APTR-204ENST00000440088 HMOX1P09601 288 aa25.82■■□□□ 1.72
APTR-204ENST00000440088 PRKAR2BP31323 418 aa25.82■■□□□ 1.72
APTR-204ENST00000440088 FKBP8Q14318 412 aa25.81■■□□□ 1.72
APTR-204ENST00000440088 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
APTR-204ENST00000440088 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms