RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SLC12A5Q9H2X9 1139 aa27.24■■□□□ 1.95
SEMA3B-206ENST00000439487 ABCA3Q99758 1704 aa27.23■■□□□ 1.95
SEMA3B-206ENST00000439487 MARF1Q9Y4F3 1742 aaKnown RBP27.23■■□□□ 1.95
SEMA3B-206ENST00000439487 USP6P35125 1406 aa27.23■■□□□ 1.95
SEMA3B-206ENST00000439487 MON2Q7Z3U7 1717 aa27.22■■□□□ 1.95
SEMA3B-206ENST00000439487 ADAMTS2O95450 1211 aa27.22■■□□□ 1.95
SEMA3B-206ENST00000439487 CABLES1Q8TDN4 633 aa27.22■■□□□ 1.95
SEMA3B-206ENST00000439487 ZNF692Q9BU19 519 aaPredicted RBP27.21■■□□□ 1.95
SEMA3B-206ENST00000439487 CPSF1Q10570 1443 aaKnown RBP27.2■■□□□ 1.94
SEMA3B-206ENST00000439487 CDCA8Q53HL2 280 aa27.2■■□□□ 1.94
SEMA3B-206ENST00000439487 CD163L1Q9NR16 1453 aa27.19■■□□□ 1.94
SEMA3B-206ENST00000439487 CRYBG1Q9Y4K1 1723 aa27.19■■□□□ 1.94
SEMA3B-206ENST00000439487 NUTM2GQ5VZR2 741 aa27.18■■□□□ 1.94
SEMA3B-206ENST00000439487 KTN1Q86UP2 1357 aaKnown RBP27.18■■□□□ 1.94
SEMA3B-206ENST00000439487 ABTB2Q8N961 1025 aa27.17■■□□□ 1.94
SEMA3B-206ENST00000439487 BRD4O60885 1362 aaPredicted RBP27.17■■□□□ 1.94
SEMA3B-206ENST00000439487 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
SEMA3B-206ENST00000439487 HAP1P54257 671 aaPredicted RBP27.16■■□□□ 1.94
SEMA3B-206ENST00000439487 HDGFL2Q7Z4V5 671 aaPredicted RBP27.16■■□□□ 1.94
SEMA3B-206ENST00000439487 RGS17Q9UGC6 210 aaPredicted RBP27.16■■□□□ 1.94
SEMA3B-206ENST00000439487 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
SEMA3B-206ENST00000439487 NINLQ9Y2I6 1382 aa27.15■■□□□ 1.94
SEMA3B-206ENST00000439487 C8orf37Q96NL8 207 aa27.15■■□□□ 1.94
SEMA3B-206ENST00000439487 MYOM1P52179 1685 aa27.14■■□□□ 1.94
SEMA3B-206ENST00000439487 TERF2IPQ9NYB0 399 aa27.14■■□□□ 1.94
SEMA3B-206ENST00000439487 TTC21BQ7Z4L5 1316 aa27.14■■□□□ 1.93
SEMA3B-206ENST00000439487 A0A1W2PP64 1363 aa27.13■■□□□ 1.93
SEMA3B-206ENST00000439487 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
SEMA3B-206ENST00000439487 PIK3C2AO00443 1686 aa27.13■■□□□ 1.93
SEMA3B-206ENST00000439487 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
SEMA3B-206ENST00000439487 NGLY1Q96IV0 654 aa27.11■■□□□ 1.93
SEMA3B-206ENST00000439487 AFF2P51816 1311 aa27.1■■□□□ 1.93
SEMA3B-206ENST00000439487 C11orf95C9JLR9 678 aaPredicted RBP27.09■■□□□ 1.93
SEMA3B-206ENST00000439487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.09■■□□□ 1.93
SEMA3B-206ENST00000439487 NLRP6P59044 892 aa27.08■■□□□ 1.93
SEMA3B-206ENST00000439487 NLRP13Q86W25 1043 aa27.08■■□□□ 1.93
SEMA3B-206ENST00000439487 TTC21AQ8NDW8 1320 aa27.08■■□□□ 1.93
SEMA3B-206ENST00000439487 ANKRD36BQ8N2N9 1353 aa27.07■■□□□ 1.92
SEMA3B-206ENST00000439487 EDC4Q6P2E9 1401 aaKnown RBP27.06■■□□□ 1.92
SEMA3B-206ENST00000439487 POTEAQ6S8J7 498 aa27.04■■□□□ 1.92
SEMA3B-206ENST00000439487 USP19O94966 1318 aa27.04■■□□□ 1.92
SEMA3B-206ENST00000439487 PLCH1Q4KWH8 1693 aa27.03■■□□□ 1.92
SEMA3B-206ENST00000439487 ZNF772Q68DY9 489 aaPredicted RBP27.03■■□□□ 1.92
SEMA3B-206ENST00000439487 ZRANB1Q9UGI0 708 aa27.03■■□□□ 1.92
SEMA3B-206ENST00000439487 NME9Q86XW9 330 aa27.02■■□□□ 1.92
SEMA3B-206ENST00000439487 FNBP4Q8N3X1 1017 aaPredicted RBP27.02■■□□□ 1.92
SEMA3B-206ENST00000439487 FAM83GA6ND36 823 aa27.01■■□□□ 1.91
SEMA3B-206ENST00000439487 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
SEMA3B-206ENST00000439487 USP21Q9UK80 565 aa27■■□□□ 1.91
SEMA3B-206ENST00000439487 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
SEMA3B-206ENST00000439487 USP54Q70EL1 1684 aa26.99■■□□□ 1.91
SEMA3B-206ENST00000439487 GCP02774 474 aa26.99■■□□□ 1.91
SEMA3B-206ENST00000439487 SLIT3O75094 1523 aa26.99■■□□□ 1.91
SEMA3B-206ENST00000439487 NWD2Q9ULI1 1742 aa26.99■■□□□ 1.91
SEMA3B-206ENST00000439487 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
SEMA3B-206ENST00000439487 KIF7Q2M1P5 1343 aa26.97■■□□□ 1.91
SEMA3B-206ENST00000439487 SLIT2O94813 1529 aa26.97■■□□□ 1.91
SEMA3B-206ENST00000439487 USP31Q70CQ4 1352 aa26.97■■□□□ 1.91
SEMA3B-206ENST00000439487 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.96■■□□□ 1.91
SEMA3B-206ENST00000439487 BCL9LQ86UU0 1499 aa26.96■■□□□ 1.91
SEMA3B-206ENST00000439487 KIF20BQ96Q89 1820 aa26.96■■□□□ 1.91
SEMA3B-206ENST00000439487 CARD14Q9BXL6 1004 aa26.96■■□□□ 1.91
SEMA3B-206ENST00000439487 PRDM11Q9NQV5 511 aa26.96■■□□□ 1.91
SEMA3B-206ENST00000439487 CHRNA2Q15822 529 aa26.95■■□□□ 1.9
SEMA3B-206ENST00000439487 QTRT2Q9H974 415 aaKnown RBP26.95■■□□□ 1.9
SEMA3B-206ENST00000439487 SOX12O15370 315 aa26.94■■□□□ 1.9
SEMA3B-206ENST00000439487 ZEB1P37275 1124 aaPredicted RBP26.93■■□□□ 1.9
SEMA3B-206ENST00000439487 NSD3Q9BZ95 1437 aa26.92■■□□□ 1.9
SEMA3B-206ENST00000439487 UNC5CLQ8IV45 518 aa26.92■■□□□ 1.9
SEMA3B-206ENST00000439487 NRAPQ86VF7 1730 aa26.92■■□□□ 1.9
SEMA3B-206ENST00000439487 ZBTB7CA1YPR0 619 aa26.91■■□□□ 1.9
SEMA3B-206ENST00000439487 PANK3Q9H999 370 aa26.91■■□□□ 1.9
SEMA3B-206ENST00000439487 BTG4Q9NY30 223 aa26.91■■□□□ 1.9
SEMA3B-206ENST00000439487 CPDO75976 1380 aa26.91■■□□□ 1.9
SEMA3B-206ENST00000439487 KCNH5Q8NCM2 988 aa26.9■■□□□ 1.9
SEMA3B-206ENST00000439487 TRPC5Q9UL62 973 aaPredicted RBP26.9■■□□□ 1.9
SEMA3B-206ENST00000439487 OVOS2A0A0J9YW53 1432 aa26.9■■□□□ 1.9
SEMA3B-206ENST00000439487 ATRNO75882 1429 aa26.9■■□□□ 1.9
SEMA3B-206ENST00000439487 OVOS2Q6IE36 1432 aa26.9■■□□□ 1.9
SEMA3B-206ENST00000439487 CCDC7Q96M83 1385 aa26.89■■□□□ 1.9
SEMA3B-206ENST00000439487 FYB1O15117 783 aa26.89■■□□□ 1.9
SEMA3B-206ENST00000439487 NFAT5O94916 1531 aa26.89■■□□□ 1.89
SEMA3B-206ENST00000439487 RGPD5Q99666 1765 aa26.89■■□□□ 1.89
SEMA3B-206ENST00000439487 GGNBP2Q9H3C7 697 aa26.88■■□□□ 1.89
SEMA3B-206ENST00000439487 LTN1O94822 1766 aa26.88■■□□□ 1.89
SEMA3B-206ENST00000439487 COL18A1P39060 1754 aa26.87■■□□□ 1.89
SEMA3B-206ENST00000439487 LMO7Q8WWI1 1683 aa26.87■■□□□ 1.89
SEMA3B-206ENST00000439487 RXRBP28702 533 aa26.87■■□□□ 1.89
SEMA3B-206ENST00000439487 COG3Q96JB2 828 aa26.87■■□□□ 1.89
SEMA3B-206ENST00000439487 WASHC2AQ641Q2 1341 aa26.87■■□□□ 1.89
SEMA3B-206ENST00000439487 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
SEMA3B-206ENST00000439487 CAMTA1Q9Y6Y1 1673 aa26.85■■□□□ 1.89
SEMA3B-206ENST00000439487 ARHGEF25Q86VW2 580 aa26.84■■□□□ 1.89
SEMA3B-206ENST00000439487 VPS72Q15906 364 aa26.82■■□□□ 1.88
SEMA3B-206ENST00000439487 GJD4Q96KN9 370 aaPredicted RBP26.81■■□□□ 1.88
SEMA3B-206ENST00000439487 STRN4Q9NRL3 753 aa26.81■■□□□ 1.88
SEMA3B-206ENST00000439487 CCDC9Q9Y3X0 531 aaKnown RBP26.81■■□□□ 1.88
SEMA3B-206ENST00000439487 AATKQ6ZMQ8 1374 aa26.81■■□□□ 1.88
SEMA3B-206ENST00000439487 ANKRD26Q9UPS8 1709 aa26.8■■□□□ 1.88
SEMA3B-206ENST00000439487 CGNL1Q0VF96 1302 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms