RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
AC004540.1-201ENST00000439120 SRPK2P78362 688 aaKnown RBP26.53■■□□□ 1.84
AC004540.1-201ENST00000439120 SIN3AQ96ST3 1273 aa26.53■■□□□ 1.84
AC004540.1-201ENST00000439120 COL14A1Q05707 1796 aaKnown RBP26.52■■□□□ 1.84
AC004540.1-201ENST00000439120 QRICH2Q9H0J4 1663 aa26.51■■□□□ 1.83
AC004540.1-201ENST00000439120 ACEP12821 1306 aa26.5■■□□□ 1.83
AC004540.1-201ENST00000439120 BTG4Q9NY30 223 aa26.5■■□□□ 1.83
AC004540.1-201ENST00000439120 CRYBG1Q9Y4K1 1723 aa26.49■■□□□ 1.83
AC004540.1-201ENST00000439120 POLR3AO14802 1390 aaPredicted RBP26.48■■□□□ 1.83
AC004540.1-201ENST00000439120 A0A0G2JS52 829 aa26.48■■□□□ 1.83
AC004540.1-201ENST00000439120 MYT1Q01538 1121 aa26.48■■□□□ 1.83
AC004540.1-201ENST00000439120 SEPT12Q8IYM1 358 aa26.48■■□□□ 1.83
AC004540.1-201ENST00000439120 NRAPQ86VF7 1730 aa26.48■■□□□ 1.83
AC004540.1-201ENST00000439120 NBPF8Q3BBV2 869 aa26.47■■□□□ 1.83
AC004540.1-201ENST00000439120 CCDC125Q86Z20 511 aa26.47■■□□□ 1.83
AC004540.1-201ENST00000439120 PRDM11Q9NQV5 511 aa26.47■■□□□ 1.83
AC004540.1-201ENST00000439120 TRPM1Q7Z4N2 1603 aa26.47■■□□□ 1.83
AC004540.1-201ENST00000439120 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
AC004540.1-201ENST00000439120 BRWD3Q6RI45 1802 aa26.46■■□□□ 1.83
AC004540.1-201ENST00000439120 EP400Q96L91 3159 aa26.45■■□□□ 1.83
AC004540.1-201ENST00000439120 PPIP5K1Q6PFW1 1433 aa26.45■■□□□ 1.82
AC004540.1-201ENST00000439120 PHRF1Q9P1Y6 1649 aaKnown RBP26.44■■□□□ 1.82
AC004540.1-201ENST00000439120 NUTM2GQ5VZR2 741 aa26.44■■□□□ 1.82
AC004540.1-201ENST00000439120 CABP2Q9NPB3 220 aa26.44■■□□□ 1.82
AC004540.1-201ENST00000439120 ROCK2O75116 1388 aaKnown RBP26.44■■□□□ 1.82
AC004540.1-201ENST00000439120 ABTB2Q8N961 1025 aa26.41■■□□□ 1.82
AC004540.1-201ENST00000439120 ONECUT3O60422 494 aaPredicted RBP26.4■■□□□ 1.82
AC004540.1-201ENST00000439120 KIAA0232Q92628 1395 aa26.4■■□□□ 1.82
AC004540.1-201ENST00000439120 FAM98CQ17RN3 349 aaKnown RBP26.39■■□□□ 1.82
AC004540.1-201ENST00000439120 KRT27Q7Z3Y8 459 aa26.39■■□□□ 1.82
AC004540.1-201ENST00000439120 EVC2Q86UK5 1308 aa26.39■■□□□ 1.81
AC004540.1-201ENST00000439120 ZC3H6P61129 1189 aaKnown RBP26.38■■□□□ 1.81
AC004540.1-201ENST00000439120 BLMP54132 1417 aaPredicted RBP26.38■■□□□ 1.81
AC004540.1-201ENST00000439120 SF3B2Q13435 895 aaKnown RBP26.37■■□□□ 1.81
AC004540.1-201ENST00000439120 CHRNA2Q15822 529 aa26.36■■□□□ 1.81
AC004540.1-201ENST00000439120 SPATA31A5Q5VU36 1347 aa26.35■■□□□ 1.81
AC004540.1-201ENST00000439120 SPATA31A7Q8IWB4 1347 aa26.35■■□□□ 1.81
AC004540.1-201ENST00000439120 NLRP13Q86W25 1043 aa26.34■■□□□ 1.81
AC004540.1-201ENST00000439120 STRN4Q9NRL3 753 aa26.34■■□□□ 1.81
AC004540.1-201ENST00000439120 CABP1Q9NZU7 370 aa26.34■■□□□ 1.81
AC004540.1-201ENST00000439120 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.81
AC004540.1-201ENST00000439120 NRKQ7Z2Y5 1582 aa26.33■■□□□ 1.81
AC004540.1-201ENST00000439120 ZRANB1Q9UGI0 708 aa26.33■■□□□ 1.81
AC004540.1-201ENST00000439120 EVA1CP58658 441 aa26.31■■□□□ 1.8
AC004540.1-201ENST00000439120 TONSLQ96HA7 1378 aa26.31■■□□□ 1.8
AC004540.1-201ENST00000439120 USP19O94966 1318 aa26.3■■□□□ 1.8
AC004540.1-201ENST00000439120 USP6P35125 1406 aa26.3■■□□□ 1.8
AC004540.1-201ENST00000439120 SPATA31A1Q5TZJ5 1347 aa26.27■■□□□ 1.8
AC004540.1-201ENST00000439120 CPDO75976 1380 aa26.27■■□□□ 1.8
AC004540.1-201ENST00000439120 GCP02774 474 aa26.26■■□□□ 1.79
AC004540.1-201ENST00000439120 THSD7AQ9UPZ6 1657 aa26.25■■□□□ 1.79
AC004540.1-201ENST00000439120 NLRP6P59044 892 aa26.25■■□□□ 1.79
AC004540.1-201ENST00000439120 CARD11Q9BXL7 1154 aa26.25■■□□□ 1.79
AC004540.1-201ENST00000439120 USP35Q9P2H5 1018 aa26.25■■□□□ 1.79
AC004540.1-201ENST00000439120 SSH2Q76I76 1423 aa26.24■■□□□ 1.79
AC004540.1-201ENST00000439120 ZBTB7CA1YPR0 619 aa26.24■■□□□ 1.79
AC004540.1-201ENST00000439120 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
AC004540.1-201ENST00000439120 DEFB132Q7Z7B7 95 aa26.24■■□□□ 1.79
AC004540.1-201ENST00000439120 ZNF692Q9BU19 519 aaPredicted RBP26.22■■□□□ 1.79
AC004540.1-201ENST00000439120 LMO7Q8WWI1 1683 aa26.22■■□□□ 1.79
AC004540.1-201ENST00000439120 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
AC004540.1-201ENST00000439120 BAG6P46379 1132 aa26.2■■□□□ 1.78
AC004540.1-201ENST00000439120 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
AC004540.1-201ENST00000439120 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
AC004540.1-201ENST00000439120 FAM182BQ5T319 152 aa26.19■■□□□ 1.78
AC004540.1-201ENST00000439120 RGPD1P0DJD0 1748 aa26.19■■□□□ 1.78
AC004540.1-201ENST00000439120 LARP1Q6PKG0 1096 aaKnown RBP26.18■■□□□ 1.78
AC004540.1-201ENST00000439120 SLIT3O75094 1523 aa26.18■■□□□ 1.78
AC004540.1-201ENST00000439120 SBNO2Q9Y2G9 1366 aa26.18■■□□□ 1.78
AC004540.1-201ENST00000439120 TTC21BQ7Z4L5 1316 aa26.16■■□□□ 1.78
AC004540.1-201ENST00000439120 BARGINQ6ZT62 677 aa26.16■■□□□ 1.78
AC004540.1-201ENST00000439120 TCP11L2Q8N4U5 519 aa26.15■■□□□ 1.78
AC004540.1-201ENST00000439120 KTN1Q86UP2 1357 aaKnown RBP26.15■■□□□ 1.78
AC004540.1-201ENST00000439120 COL5A2P05997 1499 aaPredicted RBP26.15■■□□□ 1.78
AC004540.1-201ENST00000439120 TTC21AQ8NDW8 1320 aa26.14■■□□□ 1.78
AC004540.1-201ENST00000439120 PDE3BQ13370 1112 aa26.14■■□□□ 1.78
AC004540.1-201ENST00000439120 AATKQ6ZMQ8 1374 aa26.13■■□□□ 1.77
AC004540.1-201ENST00000439120 THRAP3Q9Y2W1 955 aaKnown RBP26.13■■□□□ 1.77
AC004540.1-201ENST00000439120 FAM196AQ6ZSG2 479 aa26.12■■□□□ 1.77
AC004540.1-201ENST00000439120 KCNH5Q8NCM2 988 aa26.12■■□□□ 1.77
AC004540.1-201ENST00000439120 CPSF1Q10570 1443 aaKnown RBP26.12■■□□□ 1.77
AC004540.1-201ENST00000439120 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
AC004540.1-201ENST00000439120 SOX12O15370 315 aa26.1■■□□□ 1.77
AC004540.1-201ENST00000439120 CRB1P82279 1406 aa26.1■■□□□ 1.77
AC004540.1-201ENST00000439120 MON2Q7Z3U7 1717 aa26.1■■□□□ 1.77
AC004540.1-201ENST00000439120 EN1Q05925 392 aaPredicted RBP26.08■■□□□ 1.77
AC004540.1-201ENST00000439120 TNS1Q9HBL0 1735 aaKnown RBP26.08■■□□□ 1.76
AC004540.1-201ENST00000439120 TOM1L2Q6ZVM7 507 aa26.07■■□□□ 1.76
AC004540.1-201ENST00000439120 HDGFL2Q7Z4V5 671 aaPredicted RBP26.07■■□□□ 1.76
AC004540.1-201ENST00000439120 TRIM37O94972 964 aa26.06■■□□□ 1.76
AC004540.1-201ENST00000439120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.06■■□□□ 1.76
AC004540.1-201ENST00000439120 PARP4Q9UKK3 1724 aaKnown RBP26.05■■□□□ 1.76
AC004540.1-201ENST00000439120 COL18A1P39060 1754 aa26.05■■□□□ 1.76
AC004540.1-201ENST00000439120 ARHGEF25Q86VW2 580 aa26.04■■□□□ 1.76
AC004540.1-201ENST00000439120 TERF2IPQ9NYB0 399 aa26.03■■□□□ 1.76
AC004540.1-201ENST00000439120 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
AC004540.1-201ENST00000439120 CSB-PGBD3P0DP91 1061 aa26.02■■□□□ 1.76
AC004540.1-201ENST00000439120 SRCAPQ6ZRS2 3230 aa26.02■■□□□ 1.76
AC004540.1-201ENST00000439120 WDR17Q8IZU2 1322 aa26.01■■□□□ 1.75
AC004540.1-201ENST00000439120 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms