RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
CSTF3-203ENST00000438862 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
CSTF3-203ENST00000438862 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
CSTF3-203ENST00000438862 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
CSTF3-203ENST00000438862 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CSTF3-203ENST00000438862 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
CSTF3-203ENST00000438862 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
CSTF3-203ENST00000438862 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
CSTF3-203ENST00000438862 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
CSTF3-203ENST00000438862 TECPR2O15040 1411 aa16.96■□□□□ 0.31
CSTF3-203ENST00000438862 CAMKK2Q96RR4 588 aa16.96■□□□□ 0.31
CSTF3-203ENST00000438862 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
CSTF3-203ENST00000438862 ARHGEF10O15013 1369 aa16.96■□□□□ 0.31
CSTF3-203ENST00000438862 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.3
CSTF3-203ENST00000438862 STK26Q9P289 416 aa16.95■□□□□ 0.3
CSTF3-203ENST00000438862 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
CSTF3-203ENST00000438862 PPLO60437 1756 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 ITGAEP38570 1179 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 FAM182BQ5T319 152 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
CSTF3-203ENST00000438862 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
CSTF3-203ENST00000438862 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
CSTF3-203ENST00000438862 NRAPQ86VF7 1730 aa16.92■□□□□ 0.3
CSTF3-203ENST00000438862 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
CSTF3-203ENST00000438862 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
CSTF3-203ENST00000438862 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
CSTF3-203ENST00000438862 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
CSTF3-203ENST00000438862 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
CSTF3-203ENST00000438862 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
CSTF3-203ENST00000438862 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
CSTF3-203ENST00000438862 APBA3O96018 575 aa16.9■□□□□ 0.3
CSTF3-203ENST00000438862 SIRT1Q96EB6 747 aa16.9■□□□□ 0.3
CSTF3-203ENST00000438862 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.3
CSTF3-203ENST00000438862 TRIM37O94972 964 aa16.89■□□□□ 0.29
CSTF3-203ENST00000438862 SPON1Q9HCB6 807 aa16.89■□□□□ 0.29
CSTF3-203ENST00000438862 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
CSTF3-203ENST00000438862 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
CSTF3-203ENST00000438862 NRXN1Q9ULB1 1477 aa16.88■□□□□ 0.29
CSTF3-203ENST00000438862 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
CSTF3-203ENST00000438862 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
CSTF3-203ENST00000438862 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
CSTF3-203ENST00000438862 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
CSTF3-203ENST00000438862 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
CSTF3-203ENST00000438862 KCNQ2O43526 872 aa16.86■□□□□ 0.29
CSTF3-203ENST00000438862 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
CSTF3-203ENST00000438862 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
CSTF3-203ENST00000438862 IFFO2Q5TF58 517 aa16.84■□□□□ 0.29
CSTF3-203ENST00000438862 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
CSTF3-203ENST00000438862 RREB1Q92766 1687 aa16.83■□□□□ 0.28
CSTF3-203ENST00000438862 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
CSTF3-203ENST00000438862 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.28
CSTF3-203ENST00000438862 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
CSTF3-203ENST00000438862 PMFBP1Q8TBY8 1022 aa16.81■□□□□ 0.28
CSTF3-203ENST00000438862 NUP188Q5SRE5 1749 aa16.8■□□□□ 0.28
CSTF3-203ENST00000438862 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
CSTF3-203ENST00000438862 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
CSTF3-203ENST00000438862 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
CSTF3-203ENST00000438862 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
CSTF3-203ENST00000438862 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
CSTF3-203ENST00000438862 GABBR2O75899 941 aa16.78■□□□□ 0.28
CSTF3-203ENST00000438862 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
CSTF3-203ENST00000438862 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
CSTF3-203ENST00000438862 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
CSTF3-203ENST00000438862 TRPM3Q9HCF6 1732 aaPredicted RBP16.77■□□□□ 0.28
CSTF3-203ENST00000438862 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
CSTF3-203ENST00000438862 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
CSTF3-203ENST00000438862 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
CSTF3-203ENST00000438862 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
CSTF3-203ENST00000438862 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
CSTF3-203ENST00000438862 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
CSTF3-203ENST00000438862 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
CSTF3-203ENST00000438862 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
CSTF3-203ENST00000438862 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
CSTF3-203ENST00000438862 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
CSTF3-203ENST00000438862 PRAM1Q96QH2 718 aa16.73■□□□□ 0.27
CSTF3-203ENST00000438862 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSTF3-203ENST00000438862 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
CSTF3-203ENST00000438862 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
CSTF3-203ENST00000438862 EVA1CP58658 441 aa16.71■□□□□ 0.27
CSTF3-203ENST00000438862 POGKQ9P215 609 aa16.71■□□□□ 0.27
CSTF3-203ENST00000438862 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
CSTF3-203ENST00000438862 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
CSTF3-203ENST00000438862 KIAA0232Q92628 1395 aa16.7■□□□□ 0.26
CSTF3-203ENST00000438862 PLSCR1O15162 318 aa16.69■□□□□ 0.26
CSTF3-203ENST00000438862 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
CSTF3-203ENST00000438862 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
CSTF3-203ENST00000438862 CHD4Q14839 1912 aa16.68■□□□□ 0.26
CSTF3-203ENST00000438862 THRAP3Q9Y2W1 955 aaKnown RBP16.68■□□□□ 0.26
CSTF3-203ENST00000438862 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
CSTF3-203ENST00000438862 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
CSTF3-203ENST00000438862 DLC1Q96QB1 1528 aa16.66■□□□□ 0.26
CSTF3-203ENST00000438862 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
CSTF3-203ENST00000438862 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
CSTF3-203ENST00000438862 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
CSTF3-203ENST00000438862 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
CSTF3-203ENST00000438862 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms