RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
RPE-211ENST00000438265 PSME1Q06323 249 aa12.04□□□□□ -0.48
RPE-211ENST00000438265 VPS72Q15906 364 aa12.04□□□□□ -0.48
RPE-211ENST00000438265 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
RPE-211ENST00000438265 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
RPE-211ENST00000438265 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
RPE-211ENST00000438265 ARHGEF10O15013 1369 aa12.03□□□□□ -0.48
RPE-211ENST00000438265 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
RPE-211ENST00000438265 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
RPE-211ENST00000438265 SBF2Q86WG5 1849 aa12.02□□□□□ -0.49
RPE-211ENST00000438265 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
RPE-211ENST00000438265 BTG4Q9NY30 223 aa12.01□□□□□ -0.49
RPE-211ENST00000438265 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
RPE-211ENST00000438265 COL18A1P39060 1754 aa12□□□□□ -0.49
RPE-211ENST00000438265 AKAP12Q02952 1782 aa12□□□□□ -0.49
RPE-211ENST00000438265 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
RPE-211ENST00000438265 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
RPE-211ENST00000438265 PIK3C2AO00443 1686 aa12□□□□□ -0.49
RPE-211ENST00000438265 CAMTA1Q9Y6Y1 1673 aa12□□□□□ -0.49
RPE-211ENST00000438265 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
RPE-211ENST00000438265 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
RPE-211ENST00000438265 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
RPE-211ENST00000438265 CCDC9Q9Y3X0 531 aaKnown RBP11.99□□□□□ -0.49
RPE-211ENST00000438265 RREB1Q92766 1687 aa11.99□□□□□ -0.49
RPE-211ENST00000438265 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
RPE-211ENST00000438265 LRP5O75197 1615 aa11.98□□□□□ -0.49
RPE-211ENST00000438265 KIAA0232Q92628 1395 aa11.98□□□□□ -0.49
RPE-211ENST00000438265 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
RPE-211ENST00000438265 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
RPE-211ENST00000438265 POLR3AO14802 1390 aaPredicted RBP11.97□□□□□ -0.49
RPE-211ENST00000438265 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
RPE-211ENST00000438265 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
RPE-211ENST00000438265 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
RPE-211ENST00000438265 KRT27Q7Z3Y8 459 aa11.97□□□□□ -0.49
RPE-211ENST00000438265 ACEP12821 1306 aa11.96□□□□□ -0.49
RPE-211ENST00000438265 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
RPE-211ENST00000438265 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
RPE-211ENST00000438265 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
RPE-211ENST00000438265 PEAK1Q9H792 1746 aa11.95□□□□□ -0.5
RPE-211ENST00000438265 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
RPE-211ENST00000438265 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
RPE-211ENST00000438265 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
RPE-211ENST00000438265 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
RPE-211ENST00000438265 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
RPE-211ENST00000438265 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
RPE-211ENST00000438265 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
RPE-211ENST00000438265 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
RPE-211ENST00000438265 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
RPE-211ENST00000438265 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 MON2Q7Z3U7 1717 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
RPE-211ENST00000438265 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 SSH2Q76I76 1423 aa11.92□□□□□ -0.5
RPE-211ENST00000438265 SLIT3O75094 1523 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 USP19O94966 1318 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 A0A0G2JS52 829 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 MYT1Q01538 1121 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
RPE-211ENST00000438265 LTN1O94822 1766 aa11.9□□□□□ -0.5
RPE-211ENST00000438265 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
RPE-211ENST00000438265 L3MBTL2Q969R5 705 aa11.9□□□□□ -0.5
RPE-211ENST00000438265 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
RPE-211ENST00000438265 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
RPE-211ENST00000438265 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
RPE-211ENST00000438265 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
RPE-211ENST00000438265 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
RPE-211ENST00000438265 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
RPE-211ENST00000438265 USP6P35125 1406 aa11.88□□□□□ -0.51
RPE-211ENST00000438265 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
RPE-211ENST00000438265 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
RPE-211ENST00000438265 TRIM37O94972 964 aa11.87□□□□□ -0.51
RPE-211ENST00000438265 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
RPE-211ENST00000438265 CPDO75976 1380 aa11.87□□□□□ -0.51
RPE-211ENST00000438265 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
RPE-211ENST00000438265 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
RPE-211ENST00000438265 NFAT5O94916 1531 aa11.86□□□□□ -0.51
RPE-211ENST00000438265 BAG6P46379 1132 aa11.85□□□□□ -0.51
RPE-211ENST00000438265 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
RPE-211ENST00000438265 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
RPE-211ENST00000438265 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
RPE-211ENST00000438265 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
RPE-211ENST00000438265 KAT6BQ8WYB5 2073 aa11.85□□□□□ -0.51
RPE-211ENST00000438265 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
RPE-211ENST00000438265 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
RPE-211ENST00000438265 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
RPE-211ENST00000438265 GCP02774 474 aa11.84□□□□□ -0.51
RPE-211ENST00000438265 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
RPE-211ENST00000438265 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
RPE-211ENST00000438265 AXIN2Q9Y2T1 843 aa11.84□□□□□ -0.51
RPE-211ENST00000438265 CD163L1Q9NR16 1453 aa11.83□□□□□ -0.52
RPE-211ENST00000438265 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
RPE-211ENST00000438265 BARGINQ6ZT62 677 aa11.82□□□□□ -0.52
RPE-211ENST00000438265 CPSF1Q10570 1443 aaKnown RBP11.81□□□□□ -0.52
RPE-211ENST00000438265 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
RPE-211ENST00000438265 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
RPE-211ENST00000438265 CRB1P82279 1406 aa11.8□□□□□ -0.52
RPE-211ENST00000438265 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms