RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
SNHG3-202ENST00000437681 PNPLA6Q8IY17 1366 aa15.98■□□□□ 0.15
SNHG3-202ENST00000437681 ACEP12821 1306 aa15.97■□□□□ 0.15
SNHG3-202ENST00000437681 HSPA1LP34931 641 aa15.97■□□□□ 0.15
SNHG3-202ENST00000437681 KRT28Q7Z3Y7 464 aa15.97■□□□□ 0.15
SNHG3-202ENST00000437681 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
SNHG3-202ENST00000437681 HDGFL2Q7Z4V5 671 aaPredicted RBP15.97■□□□□ 0.15
SNHG3-202ENST00000437681 ILDR1Q86SU0 546 aaPredicted RBP15.96■□□□□ 0.15
SNHG3-202ENST00000437681 SLIT3O75094 1523 aa15.96■□□□□ 0.15
SNHG3-202ENST00000437681 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.14
SNHG3-202ENST00000437681 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
SNHG3-202ENST00000437681 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
SNHG3-202ENST00000437681 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
SNHG3-202ENST00000437681 CABP1Q9NZU7 370 aa15.94■□□□□ 0.14
SNHG3-202ENST00000437681 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
SNHG3-202ENST00000437681 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.92■□□□□ 0.14
SNHG3-202ENST00000437681 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
SNHG3-202ENST00000437681 NSD2O96028 1365 aa15.92■□□□□ 0.14
SNHG3-202ENST00000437681 KTN1Q86UP2 1357 aaKnown RBP15.92■□□□□ 0.14
SNHG3-202ENST00000437681 USP19O94966 1318 aa15.92■□□□□ 0.14
SNHG3-202ENST00000437681 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
SNHG3-202ENST00000437681 FOXO3O43524 673 aa15.91■□□□□ 0.14
SNHG3-202ENST00000437681 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
SNHG3-202ENST00000437681 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
SNHG3-202ENST00000437681 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
SNHG3-202ENST00000437681 COL14A1Q05707 1796 aaKnown RBP15.9■□□□□ 0.14
SNHG3-202ENST00000437681 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
SNHG3-202ENST00000437681 PMFBP1Q8TBY8 1022 aa15.88■□□□□ 0.13
SNHG3-202ENST00000437681 CPDO75976 1380 aa15.88■□□□□ 0.13
SNHG3-202ENST00000437681 KIF7Q2M1P5 1343 aa15.87■□□□□ 0.13
SNHG3-202ENST00000437681 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
SNHG3-202ENST00000437681 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
SNHG3-202ENST00000437681 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
SNHG3-202ENST00000437681 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
SNHG3-202ENST00000437681 OVOS2A0A0J9YW53 1432 aa15.86■□□□□ 0.13
SNHG3-202ENST00000437681 OVOS2Q6IE36 1432 aa15.86■□□□□ 0.13
SNHG3-202ENST00000437681 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
SNHG3-202ENST00000437681 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
SNHG3-202ENST00000437681 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
SNHG3-202ENST00000437681 KCNH5Q8NCM2 988 aa15.84■□□□□ 0.13
SNHG3-202ENST00000437681 NFAT5O94916 1531 aa15.84■□□□□ 0.13
SNHG3-202ENST00000437681 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
SNHG3-202ENST00000437681 LRP6O75581 1613 aa15.83■□□□□ 0.12
SNHG3-202ENST00000437681 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
SNHG3-202ENST00000437681 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
SNHG3-202ENST00000437681 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
SNHG3-202ENST00000437681 NRAPQ86VF7 1730 aa15.81■□□□□ 0.12
SNHG3-202ENST00000437681 COL18A1P39060 1754 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 AATKQ6ZMQ8 1374 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 SLIT2O94813 1529 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
SNHG3-202ENST00000437681 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
SNHG3-202ENST00000437681 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
SNHG3-202ENST00000437681 FNBP4Q8N3X1 1017 aaPredicted RBP15.77■□□□□ 0.12
SNHG3-202ENST00000437681 LTN1O94822 1766 aa15.76■□□□□ 0.11
SNHG3-202ENST00000437681 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
SNHG3-202ENST00000437681 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
SNHG3-202ENST00000437681 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
SNHG3-202ENST00000437681 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
SNHG3-202ENST00000437681 COG3Q96JB2 828 aa15.75■□□□□ 0.11
SNHG3-202ENST00000437681 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
SNHG3-202ENST00000437681 PANK3Q9H999 370 aa15.75■□□□□ 0.11
SNHG3-202ENST00000437681 BLMP54132 1417 aaPredicted RBP15.75■□□□□ 0.11
SNHG3-202ENST00000437681 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
SNHG3-202ENST00000437681 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
SNHG3-202ENST00000437681 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
SNHG3-202ENST00000437681 NLRP6P59044 892 aa15.74■□□□□ 0.11
SNHG3-202ENST00000437681 FYB1O15117 783 aa15.74■□□□□ 0.11
SNHG3-202ENST00000437681 GCP02774 474 aa15.73■□□□□ 0.11
SNHG3-202ENST00000437681 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
SNHG3-202ENST00000437681 ATRNO75882 1429 aa15.73■□□□□ 0.11
SNHG3-202ENST00000437681 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
SNHG3-202ENST00000437681 ARHGEF25Q86VW2 580 aa15.71■□□□□ 0.11
SNHG3-202ENST00000437681 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
SNHG3-202ENST00000437681 MEX3CQ5U5Q3 659 aaKnown RBP15.7■□□□□ 0.1
SNHG3-202ENST00000437681 NME9Q86XW9 330 aa15.7■□□□□ 0.1
SNHG3-202ENST00000437681 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
SNHG3-202ENST00000437681 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
SNHG3-202ENST00000437681 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
SNHG3-202ENST00000437681 INSRP06213 1382 aa15.69■□□□□ 0.1
SNHG3-202ENST00000437681 BCL9LQ86UU0 1499 aa15.69■□□□□ 0.1
SNHG3-202ENST00000437681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNHG3-202ENST00000437681 KIAA0232Q92628 1395 aa15.68■□□□□ 0.1
SNHG3-202ENST00000437681 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
SNHG3-202ENST00000437681 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
SNHG3-202ENST00000437681 UNC5CLQ8IV45 518 aa15.67■□□□□ 0.1
SNHG3-202ENST00000437681 COL5A2P05997 1499 aaPredicted RBP15.66■□□□□ 0.1
SNHG3-202ENST00000437681 VPS72Q15906 364 aa15.66■□□□□ 0.1
SNHG3-202ENST00000437681 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
SNHG3-202ENST00000437681 THRAP3Q9Y2W1 955 aaKnown RBP15.65■□□□□ 0.1
SNHG3-202ENST00000437681 IP6K1Q92551 441 aa15.65■□□□□ 0.1
SNHG3-202ENST00000437681 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
SNHG3-202ENST00000437681 AFF2P51816 1311 aa15.65■□□□□ 0.1
SNHG3-202ENST00000437681 FLT4P35916 1363 aa15.65■□□□□ 0.1
SNHG3-202ENST00000437681 NCAPD2Q15021 1401 aa15.64■□□□□ 0.09
SNHG3-202ENST00000437681 FAM83GA6ND36 823 aa15.64■□□□□ 0.09
SNHG3-202ENST00000437681 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
SNHG3-202ENST00000437681 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms