RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 TMF1P82094 1093 aa22.1■■□□□ 1.13
C2CD3-206ENST00000436679 KRT28Q7Z3Y7 464 aa22.09■■□□□ 1.13
C2CD3-206ENST00000436679 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
C2CD3-206ENST00000436679 PSME1Q06323 249 aa22.08■■□□□ 1.13
C2CD3-206ENST00000436679 NGDNQ8NEJ9 315 aaKnown RBP22.08■■□□□ 1.13
C2CD3-206ENST00000436679 SBNO1A3KN83 1393 aa22.08■■□□□ 1.12
C2CD3-206ENST00000436679 ACEP12821 1306 aa22.07■■□□□ 1.12
C2CD3-206ENST00000436679 ATRNO75882 1429 aa22.07■■□□□ 1.12
C2CD3-206ENST00000436679 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
C2CD3-206ENST00000436679 SPATA31A3Q5VYP0 1347 aa22.06■■□□□ 1.12
C2CD3-206ENST00000436679 CDCA8Q53HL2 280 aa22.05■■□□□ 1.12
C2CD3-206ENST00000436679 BCL9LQ86UU0 1499 aa22.04■■□□□ 1.12
C2CD3-206ENST00000436679 NINLQ9Y2I6 1382 aa22.04■■□□□ 1.12
C2CD3-206ENST00000436679 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
C2CD3-206ENST00000436679 TRPM3Q9HCF6 1732 aaPredicted RBP22.03■■□□□ 1.12
C2CD3-206ENST00000436679 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
C2CD3-206ENST00000436679 CABLES1Q8TDN4 633 aa22.02■■□□□ 1.12
C2CD3-206ENST00000436679 GJD4Q96KN9 370 aaPredicted RBP22.02■■□□□ 1.12
C2CD3-206ENST00000436679 CPSF1Q10570 1443 aaKnown RBP22.02■■□□□ 1.12
C2CD3-206ENST00000436679 HAP1P54257 671 aaPredicted RBP22.01■■□□□ 1.11
C2CD3-206ENST00000436679 LMOD2Q6P5Q4 547 aa22.01■■□□□ 1.11
C2CD3-206ENST00000436679 EP400Q96L91 3159 aa22.01■■□□□ 1.11
C2CD3-206ENST00000436679 USP6P35125 1406 aa22■■□□□ 1.11
C2CD3-206ENST00000436679 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
C2CD3-206ENST00000436679 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
C2CD3-206ENST00000436679 CD163L1Q9NR16 1453 aa21.99■■□□□ 1.11
C2CD3-206ENST00000436679 UNC5CLQ8IV45 518 aa21.99■■□□□ 1.11
C2CD3-206ENST00000436679 ZNF692Q9BU19 519 aaPredicted RBP21.99■■□□□ 1.11
C2CD3-206ENST00000436679 SSH2Q76I76 1423 aa21.97■■□□□ 1.11
C2CD3-206ENST00000436679 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
C2CD3-206ENST00000436679 TMC1Q8TDI8 760 aa21.97■■□□□ 1.11
C2CD3-206ENST00000436679 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
C2CD3-206ENST00000436679 ALS2Q96Q42 1657 aa21.96■■□□□ 1.11
C2CD3-206ENST00000436679 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
C2CD3-206ENST00000436679 AKAP12Q02952 1782 aa21.94■■□□□ 1.1
C2CD3-206ENST00000436679 TERF2IPQ9NYB0 399 aa21.94■■□□□ 1.1
C2CD3-206ENST00000436679 A0A1W2PP64 1363 aa21.93■■□□□ 1.1
C2CD3-206ENST00000436679 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
C2CD3-206ENST00000436679 SLIT2O94813 1529 aa21.93■■□□□ 1.1
C2CD3-206ENST00000436679 HDGFL2Q7Z4V5 671 aaPredicted RBP21.93■■□□□ 1.1
C2CD3-206ENST00000436679 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
C2CD3-206ENST00000436679 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
C2CD3-206ENST00000436679 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
C2CD3-206ENST00000436679 ANKRD36BQ8N2N9 1353 aa21.92■■□□□ 1.1
C2CD3-206ENST00000436679 CCDC9Q9Y3X0 531 aaKnown RBP21.91■■□□□ 1.1
C2CD3-206ENST00000436679 MON2Q7Z3U7 1717 aa21.91■■□□□ 1.1
C2CD3-206ENST00000436679 TTC21AQ8NDW8 1320 aa21.9■■□□□ 1.1
C2CD3-206ENST00000436679 C11orf95C9JLR9 678 aaPredicted RBP21.9■■□□□ 1.1
C2CD3-206ENST00000436679 MYOM1P52179 1685 aa21.9■■□□□ 1.1
C2CD3-206ENST00000436679 EDC4Q6P2E9 1401 aaKnown RBP21.89■■□□□ 1.1
C2CD3-206ENST00000436679 TTC21BQ7Z4L5 1316 aa21.89■■□□□ 1.1
C2CD3-206ENST00000436679 GLI3P10071 1580 aa21.88■■□□□ 1.09
C2CD3-206ENST00000436679 FAM83GA6ND36 823 aa21.88■■□□□ 1.09
C2CD3-206ENST00000436679 VPS72Q15906 364 aa21.87■■□□□ 1.09
C2CD3-206ENST00000436679 SEPT12Q8IYM1 358 aa21.87■■□□□ 1.09
C2CD3-206ENST00000436679 ABTB2Q8N961 1025 aa21.87■■□□□ 1.09
C2CD3-206ENST00000436679 KIF7Q2M1P5 1343 aa21.86■■□□□ 1.09
C2CD3-206ENST00000436679 USP19O94966 1318 aa21.85■■□□□ 1.09
C2CD3-206ENST00000436679 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.85■■□□□ 1.09
C2CD3-206ENST00000436679 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
C2CD3-206ENST00000436679 CRYBG1Q9Y4K1 1723 aa21.84■■□□□ 1.09
C2CD3-206ENST00000436679 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
C2CD3-206ENST00000436679 PIK3C2AO00443 1686 aa21.84■■□□□ 1.09
C2CD3-206ENST00000436679 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.09
C2CD3-206ENST00000436679 BLMP54132 1417 aaPredicted RBP21.82■■□□□ 1.08
C2CD3-206ENST00000436679 NUTM2GQ5VZR2 741 aa21.82■■□□□ 1.08
C2CD3-206ENST00000436679 USP31Q70CQ4 1352 aa21.82■■□□□ 1.08
C2CD3-206ENST00000436679 A0A0G2JS52 829 aa21.81■■□□□ 1.08
C2CD3-206ENST00000436679 ONECUT3O60422 494 aaPredicted RBP21.81■■□□□ 1.08
C2CD3-206ENST00000436679 MYT1Q01538 1121 aa21.81■■□□□ 1.08
C2CD3-206ENST00000436679 BTG4Q9NY30 223 aa21.81■■□□□ 1.08
C2CD3-206ENST00000436679 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
C2CD3-206ENST00000436679 NLRP6P59044 892 aa21.8■■□□□ 1.08
C2CD3-206ENST00000436679 DEFB132Q7Z7B7 95 aa21.8■■□□□ 1.08
C2CD3-206ENST00000436679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.08
C2CD3-206ENST00000436679 PHRF1Q9P1Y6 1649 aaKnown RBP21.8■■□□□ 1.08
C2CD3-206ENST00000436679 SLIT3O75094 1523 aa21.8■■□□□ 1.08
C2CD3-206ENST00000436679 WASHC2AQ641Q2 1341 aa21.8■■□□□ 1.08
C2CD3-206ENST00000436679 NME9Q86XW9 330 aa21.79■■□□□ 1.08
C2CD3-206ENST00000436679 CARD14Q9BXL6 1004 aa21.79■■□□□ 1.08
C2CD3-206ENST00000436679 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
C2CD3-206ENST00000436679 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
C2CD3-206ENST00000436679 KRT27Q7Z3Y8 459 aa21.78■■□□□ 1.08
C2CD3-206ENST00000436679 FAM98CQ17RN3 349 aaKnown RBP21.77■■□□□ 1.08
C2CD3-206ENST00000436679 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
C2CD3-206ENST00000436679 BRWD3Q6RI45 1802 aa21.76■■□□□ 1.07
C2CD3-206ENST00000436679 OVOS2A0A0J9YW53 1432 aa21.76■■□□□ 1.07
C2CD3-206ENST00000436679 GCP02774 474 aa21.76■■□□□ 1.07
C2CD3-206ENST00000436679 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
C2CD3-206ENST00000436679 OVOS2Q6IE36 1432 aa21.76■■□□□ 1.07
C2CD3-206ENST00000436679 CPDO75976 1380 aa21.75■■□□□ 1.07
C2CD3-206ENST00000436679 PANK3Q9H999 370 aa21.75■■□□□ 1.07
C2CD3-206ENST00000436679 NWD2Q9ULI1 1742 aa21.74■■□□□ 1.07
C2CD3-206ENST00000436679 KCNH5Q8NCM2 988 aa21.73■■□□□ 1.07
C2CD3-206ENST00000436679 FYB1O15117 783 aa21.72■■□□□ 1.07
C2CD3-206ENST00000436679 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
C2CD3-206ENST00000436679 KIAA0232Q92628 1395 aa21.72■■□□□ 1.07
C2CD3-206ENST00000436679 CHRNA2Q15822 529 aa21.71■■□□□ 1.07
C2CD3-206ENST00000436679 NFAT5O94916 1531 aa21.7■■□□□ 1.07
C2CD3-206ENST00000436679 FAM182BQ5T319 152 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms