RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
AC004448.3-201ENST00000435953 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
AC004448.3-201ENST00000435953 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
AC004448.3-201ENST00000435953 MYOM1P52179 1685 aa13.41□□□□□ -0.26
AC004448.3-201ENST00000435953 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
AC004448.3-201ENST00000435953 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
AC004448.3-201ENST00000435953 COG3Q96JB2 828 aa13.41□□□□□ -0.26
AC004448.3-201ENST00000435953 NSD2O96028 1365 aa13.41□□□□□ -0.26
AC004448.3-201ENST00000435953 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
AC004448.3-201ENST00000435953 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
AC004448.3-201ENST00000435953 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
AC004448.3-201ENST00000435953 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
AC004448.3-201ENST00000435953 NLRP6P59044 892 aa13.39□□□□□ -0.27
AC004448.3-201ENST00000435953 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
AC004448.3-201ENST00000435953 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
AC004448.3-201ENST00000435953 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
AC004448.3-201ENST00000435953 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
AC004448.3-201ENST00000435953 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
AC004448.3-201ENST00000435953 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
AC004448.3-201ENST00000435953 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
AC004448.3-201ENST00000435953 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
AC004448.3-201ENST00000435953 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
AC004448.3-201ENST00000435953 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
AC004448.3-201ENST00000435953 SBNO1A3KN83 1393 aa13.36□□□□□ -0.27
AC004448.3-201ENST00000435953 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
AC004448.3-201ENST00000435953 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
AC004448.3-201ENST00000435953 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
AC004448.3-201ENST00000435953 FBLN1P23142 703 aa13.34□□□□□ -0.27
AC004448.3-201ENST00000435953 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
AC004448.3-201ENST00000435953 RGPD8O14715 1765 aaPredicted RBP13.34□□□□□ -0.27
AC004448.3-201ENST00000435953 ITSN1Q15811 1721 aa13.33□□□□□ -0.27
AC004448.3-201ENST00000435953 MTHFSP49914 203 aa13.33□□□□□ -0.28
AC004448.3-201ENST00000435953 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
AC004448.3-201ENST00000435953 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
AC004448.3-201ENST00000435953 PXDNQ92626 1479 aa13.31□□□□□ -0.28
AC004448.3-201ENST00000435953 GCP02774 474 aa13.31□□□□□ -0.28
AC004448.3-201ENST00000435953 KCNH5Q8NCM2 988 aa13.31□□□□□ -0.28
AC004448.3-201ENST00000435953 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
AC004448.3-201ENST00000435953 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
AC004448.3-201ENST00000435953 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
AC004448.3-201ENST00000435953 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
AC004448.3-201ENST00000435953 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
AC004448.3-201ENST00000435953 SOX12O15370 315 aa13.3□□□□□ -0.28
AC004448.3-201ENST00000435953 ARHGEF10O15013 1369 aa13.3□□□□□ -0.28
AC004448.3-201ENST00000435953 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 RRS1Q15050 365 aaKnown RBP13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 MON2Q7Z3U7 1717 aa13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 USP19O94966 1318 aa13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
AC004448.3-201ENST00000435953 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
AC004448.3-201ENST00000435953 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
AC004448.3-201ENST00000435953 CFAP53Q96M91 514 aa13.28□□□□□ -0.28
AC004448.3-201ENST00000435953 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
AC004448.3-201ENST00000435953 AMPHP49418 695 aa13.26□□□□□ -0.29
AC004448.3-201ENST00000435953 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
AC004448.3-201ENST00000435953 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
AC004448.3-201ENST00000435953 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
AC004448.3-201ENST00000435953 INSRP06213 1382 aa13.25□□□□□ -0.29
AC004448.3-201ENST00000435953 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
AC004448.3-201ENST00000435953 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
AC004448.3-201ENST00000435953 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
AC004448.3-201ENST00000435953 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
AC004448.3-201ENST00000435953 IP6K1Q92551 441 aa13.24□□□□□ -0.29
AC004448.3-201ENST00000435953 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
AC004448.3-201ENST00000435953 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
AC004448.3-201ENST00000435953 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
AC004448.3-201ENST00000435953 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 AHDC1Q5TGY3 1603 aaPredicted RBP13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 ZBTB7CA1YPR0 619 aa13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 HOXC9P31274 260 aa13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 HSPA1LP34931 641 aa13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
AC004448.3-201ENST00000435953 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
AC004448.3-201ENST00000435953 IL13P35225 146 aa13.21□□□□□ -0.29
AC004448.3-201ENST00000435953 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
AC004448.3-201ENST00000435953 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
AC004448.3-201ENST00000435953 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
AC004448.3-201ENST00000435953 SMG6Q86US8 1419 aaKnown RBP13.2□□□□□ -0.3
AC004448.3-201ENST00000435953 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
AC004448.3-201ENST00000435953 FLT4P35916 1363 aa13.2□□□□□ -0.3
AC004448.3-201ENST00000435953 SLIT3O75094 1523 aa13.19□□□□□ -0.3
AC004448.3-201ENST00000435953 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
AC004448.3-201ENST00000435953 CPDO75976 1380 aa13.19□□□□□ -0.3
AC004448.3-201ENST00000435953 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 JCADQ9P266 1359 aa13.18□□□□□ -0.3
AC004448.3-201ENST00000435953 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
AC004448.3-201ENST00000435953 NFAT5O94916 1531 aa13.17□□□□□ -0.3
AC004448.3-201ENST00000435953 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
AC004448.3-201ENST00000435953 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms