RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PDE3BQ13370 1112 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 SPATA31A1Q5TZJ5 1347 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 RPGRIP1LQ68CZ1 1315 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 PPLO60437 1756 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 TECPR2O15040 1411 aa15.84■□□□□ 0.13
CPNE1-214ENST00000435747 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.12
CPNE1-214ENST00000435747 ZBTB7AO95365 584 aa15.81■□□□□ 0.12
CPNE1-214ENST00000435747 KNDC1Q76NI1 1749 aa15.81■□□□□ 0.12
CPNE1-214ENST00000435747 SYT17Q9BSW7 474 aa15.81■□□□□ 0.12
CPNE1-214ENST00000435747 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-214ENST00000435747 PRDM11Q9NQV5 511 aa15.8■□□□□ 0.12
CPNE1-214ENST00000435747 PTGER2P43116 358 aa15.79■□□□□ 0.12
CPNE1-214ENST00000435747 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
CPNE1-214ENST00000435747 PPARGC1BQ86YN6 1023 aaKnown RBP15.78■□□□□ 0.12
CPNE1-214ENST00000435747 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-214ENST00000435747 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
CPNE1-214ENST00000435747 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-214ENST00000435747 DLC1Q96QB1 1528 aa15.78■□□□□ 0.12
CPNE1-214ENST00000435747 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-214ENST00000435747 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.12
CPNE1-214ENST00000435747 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-214ENST00000435747 ALS2Q96Q42 1657 aa15.77■□□□□ 0.12
CPNE1-214ENST00000435747 PDGFDQ9GZP0 370 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-214ENST00000435747 USP35Q9P2H5 1018 aa15.77■□□□□ 0.12
CPNE1-214ENST00000435747 PMFBP1Q8TBY8 1022 aa15.76■□□□□ 0.11
CPNE1-214ENST00000435747 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
CPNE1-214ENST00000435747 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
CPNE1-214ENST00000435747 BCL11BQ9C0K0 894 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-214ENST00000435747 GOLGB1Q14789 3259 aaKnown RBP15.73■□□□□ 0.11
CPNE1-214ENST00000435747 TMEM132EQ6IEE7 984 aa15.73■□□□□ 0.11
CPNE1-214ENST00000435747 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
CPNE1-214ENST00000435747 C11orf95C9JLR9 678 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-214ENST00000435747 PLSCR1O15162 318 aa15.72■□□□□ 0.11
CPNE1-214ENST00000435747 CHRNA2Q15822 529 aa15.72■□□□□ 0.11
CPNE1-214ENST00000435747 GPR162Q16538 588 aa15.72■□□□□ 0.11
CPNE1-214ENST00000435747 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
CPNE1-214ENST00000435747 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
CPNE1-214ENST00000435747 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
CPNE1-214ENST00000435747 EVA1CP58658 441 aa15.7■□□□□ 0.1
CPNE1-214ENST00000435747 SHANK3Q9BYB0 1731 aa15.7■□□□□ 0.1
CPNE1-214ENST00000435747 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
CPNE1-214ENST00000435747 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 ITGAEP38570 1179 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 SIRT1Q96EB6 747 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
CPNE1-214ENST00000435747 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
CPNE1-214ENST00000435747 PAK3O75914 559 aaPredicted RBP15.68■□□□□ 0.1
CPNE1-214ENST00000435747 ARXQ96QS3 562 aa15.68■□□□□ 0.1
CPNE1-214ENST00000435747 OVOS2A0A0G2JMS6 1433 aa15.68■□□□□ 0.1
CPNE1-214ENST00000435747 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
CPNE1-214ENST00000435747 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
CPNE1-214ENST00000435747 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
CPNE1-214ENST00000435747 PARP4Q9UKK3 1724 aaKnown RBP15.67■□□□□ 0.1
CPNE1-214ENST00000435747 MAP3K5Q99683 1374 aa15.66■□□□□ 0.1
CPNE1-214ENST00000435747 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.13e-13■□□□□ 9.1
CPNE1-214ENST00000435747 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
CPNE1-214ENST00000435747 HSPA6P17066 643 aa15.65■□□□□ 0.1
CPNE1-214ENST00000435747 ZC3H6P61129 1189 aaKnown RBP15.65■□□□□ 0.1
CPNE1-214ENST00000435747 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
CPNE1-214ENST00000435747 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
CPNE1-214ENST00000435747 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
CPNE1-214ENST00000435747 SLC15A2Q16348 729 aa15.64■□□□□ 0.09
CPNE1-214ENST00000435747 PELP1Q8IZL8 1130 aaKnown RBP15.64■□□□□ 0.09
CPNE1-214ENST00000435747 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
CPNE1-214ENST00000435747 PROM2Q8N271 834 aa15.63■□□□□ 0.09
CPNE1-214ENST00000435747 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
CPNE1-214ENST00000435747 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
CPNE1-214ENST00000435747 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
CPNE1-214ENST00000435747 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
CPNE1-214ENST00000435747 PIK3C2GO75747 1445 aa15.61■□□□□ 0.09
CPNE1-214ENST00000435747 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
CPNE1-214ENST00000435747 PTF1AQ7RTS3 328 aa15.6■□□□□ 0.09
CPNE1-214ENST00000435747 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
CPNE1-214ENST00000435747 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
CPNE1-214ENST00000435747 POGKQ9P215 609 aa15.59■□□□□ 0.09
CPNE1-214ENST00000435747 EIF3AQ14152 1382 aaKnown RBP15.59■□□□□ 0.09
CPNE1-214ENST00000435747 ATP7BP35670 1465 aa15.59■□□□□ 0.09
CPNE1-214ENST00000435747 ATP10DQ9P241 1426 aa15.57■□□□□ 0.08
CPNE1-214ENST00000435747 LRRC37A3O60309 1634 aa15.57■□□□□ 0.08
CPNE1-214ENST00000435747 DDB1Q16531 1140 aa15.56■□□□□ 0.08
CPNE1-214ENST00000435747 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
CPNE1-214ENST00000435747 GPBP1L1Q9HC44 474 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-214ENST00000435747 PRR36Q9H6K5 1346 aa15.56■□□□□ 0.08
CPNE1-214ENST00000435747 LMO7Q8WWI1 1683 aa15.56■□□□□ 0.08
CPNE1-214ENST00000435747 TULP4Q9NRJ4 1543 aa15.55■□□□□ 0.08
CPNE1-214ENST00000435747 CAPN15O75808 1086 aa15.55■□□□□ 0.08
CPNE1-214ENST00000435747 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-214ENST00000435747 AKAP12Q02952 1782 aa15.54■□□□□ 0.08
CPNE1-214ENST00000435747 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
CPNE1-214ENST00000435747 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
CPNE1-214ENST00000435747 C14orf93Q9H972 538 aaKnown RBP15.53■□□□□ 0.08
CPNE1-214ENST00000435747 CRB1P82279 1406 aa15.52■□□□□ 0.08
CPNE1-214ENST00000435747 SPATA31E1Q6ZUB1 1445 aa15.52■□□□□ 0.08
CPNE1-214ENST00000435747 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.07
CPNE1-214ENST00000435747 CPDO75976 1380 aa15.51■□□□□ 0.07
CPNE1-214ENST00000435747 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
CPNE1-214ENST00000435747 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms