RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
VRK2-206ENST00000435505 FAM43AQ8N2R8 423 aa8.05□□□□□ -1.12
VRK2-206ENST00000435505 SPACA7Q96KW9 195 aa8.05□□□□□ -1.12
VRK2-206ENST00000435505 PARNO95453 639 aaKnown RBP8.05□□□□□ -1.12
VRK2-206ENST00000435505 MAP4K4O95819 1239 aaPredicted RBP8.05□□□□□ -1.12
VRK2-206ENST00000435505 RBM10P98175 930 aaKnown RBP8.05□□□□□ -1.12
VRK2-206ENST00000435505 HNRNPUQ00839 825 aaKnown RBP eCLIP8.05□□□□□ -1.12
VRK2-206ENST00000435505 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
VRK2-206ENST00000435505 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
VRK2-206ENST00000435505 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
VRK2-206ENST00000435505 WDR97A6NE52 1622 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 PPP1R3GB7ZBB8 358 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 PEX14O75381 377 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 AAMPQ13685 434 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 EXOC8Q8IYI6 725 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 TLDC2A0PJX2 215 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 ANP32CO43423 234 aa8.04□□□□□ -1.12
VRK2-206ENST00000435505 ZNF211Q13398 564 aaPredicted RBP8.04□□□□□ -1.12
VRK2-206ENST00000435505 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
VRK2-206ENST00000435505 GTF2F1P35269 517 aaKnown RBP eCLIP8.03□□□□□ -1.12
VRK2-206ENST00000435505 FGD1P98174 961 aa8.03□□□□□ -1.12
VRK2-206ENST00000435505 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
VRK2-206ENST00000435505 NOP9Q86U38 636 aaKnown RBP8.03□□□□□ -1.12
VRK2-206ENST00000435505 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
VRK2-206ENST00000435505 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
VRK2-206ENST00000435505 OATP04181 439 aa8.02□□□□□ -1.13
VRK2-206ENST00000435505 SDE2Q6IQ49 451 aa8.02□□□□□ -1.13
VRK2-206ENST00000435505 FRAT1Q92837 279 aaPredicted RBP8.02□□□□□ -1.13
VRK2-206ENST00000435505 FAM161BQ96MY7 647 aa8.02□□□□□ -1.13
VRK2-206ENST00000435505 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
VRK2-206ENST00000435505 TBX22Q9Y458 520 aa8.02□□□□□ -1.13
VRK2-206ENST00000435505 MAPKBP1O60336 1514 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 TCEAL1Q15170 157 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 CCDC88BA6NC98 1476 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 ABL1P00519 1130 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 CD46P15529 392 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 TNNI2P48788 182 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 PSME1Q06323 249 aa8.01□□□□□ -1.13
VRK2-206ENST00000435505 USP17L3A6NCW0 530 aa8□□□□□ -1.13
VRK2-206ENST00000435505 USP17L4A6NCW7 530 aa8□□□□□ -1.13
VRK2-206ENST00000435505 MRPL58Q14197 206 aaKnown RBP8□□□□□ -1.13
VRK2-206ENST00000435505 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
VRK2-206ENST00000435505 USP17L1Q7RTZ2 530 aa8□□□□□ -1.13
VRK2-206ENST00000435505 METTL16Q86W50 562 aaKnown RBP8□□□□□ -1.13
VRK2-206ENST00000435505 RNF19AQ9NV58 838 aa8□□□□□ -1.13
VRK2-206ENST00000435505 SOGA1O94964 1423 aa8□□□□□ -1.13
VRK2-206ENST00000435505 NCAPD3P42695 1498 aa8□□□□□ -1.13
VRK2-206ENST00000435505 H3BRB1 525 aa8□□□□□ -1.13
VRK2-206ENST00000435505 POTEDQ86YR6 584 aa8□□□□□ -1.13
VRK2-206ENST00000435505 PMFBP1Q8TBY8 1022 aa8□□□□□ -1.13
VRK2-206ENST00000435505 TUT1Q9H6E5 874 aaKnown RBP8□□□□□ -1.13
VRK2-206ENST00000435505 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 MAPK1P28482 360 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 HSP90AA2PQ14568 343 aaPredicted RBP7.99□□□□□ -1.13
VRK2-206ENST00000435505 TSC1Q92574 1164 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L21D6R901 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 PTPROQ16827 1216 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 NUTM1Q86Y26 1132 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 HLA-CQ95604 372 aa7.99□□□□□ -1.13
VRK2-206ENST00000435505 VPS8Q8N3P4 1428 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 ECM1Q16610 540 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 SIN3AQ96ST3 1273 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 CLIP1P30622 1438 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
VRK2-206ENST00000435505 RRP9O43818 475 aaKnown RBP7.98□□□□□ -1.13
VRK2-206ENST00000435505 MTMR3Q13615 1198 aa7.98□□□□□ -1.13
VRK2-206ENST00000435505 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
VRK2-206ENST00000435505 RRAGDQ9NQL2 400 aaPredicted RBP7.98□□□□□ -1.13
VRK2-206ENST00000435505 CUX2O14529 1486 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 hCG_2014768A0A024R1R8 64 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 DMGDHQ9UI17 866 aaKnown RBP7.97□□□□□ -1.13
VRK2-206ENST00000435505 PTK7Q13308 1070 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 TMEM92Q6UXU6 159 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 FAM174AQ8TBP5 190 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 CUEDC1Q9NWM3 386 aaPredicted RBP7.97□□□□□ -1.13
VRK2-206ENST00000435505 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
VRK2-206ENST00000435505 BAZ1BQ9UIG0 1483 aaKnown RBP7.96□□□□□ -1.13
VRK2-206ENST00000435505 GORABQ5T7V8 394 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 KCNB2Q92953 911 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 EVI5LQ96CN4 794 aa7.96□□□□□ -1.14
VRK2-206ENST00000435505 ACBD3Q9H3P7 528 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms