RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 ACEP12821 1306 aa12.71□□□□□ -0.37
RPE-207ENST00000435437 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
RPE-207ENST00000435437 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
RPE-207ENST00000435437 NRKQ7Z2Y5 1582 aa12.7□□□□□ -0.38
RPE-207ENST00000435437 PSME1Q06323 249 aa12.7□□□□□ -0.38
RPE-207ENST00000435437 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
RPE-207ENST00000435437 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
RPE-207ENST00000435437 USP21Q9UK80 565 aa12.69□□□□□ -0.38
RPE-207ENST00000435437 CCDC61Q9Y6R9 512 aa12.69□□□□□ -0.38
RPE-207ENST00000435437 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
RPE-207ENST00000435437 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
RPE-207ENST00000435437 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
RPE-207ENST00000435437 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 FAM83GA6ND36 823 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 RXRBP28702 533 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 TONSLQ96HA7 1378 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
RPE-207ENST00000435437 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
RPE-207ENST00000435437 NGDNQ8NEJ9 315 aaKnown RBP12.67□□□□□ -0.38
RPE-207ENST00000435437 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
RPE-207ENST00000435437 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
RPE-207ENST00000435437 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
RPE-207ENST00000435437 USP6P35125 1406 aa12.66□□□□□ -0.38
RPE-207ENST00000435437 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
RPE-207ENST00000435437 TESK2Q96S53 571 aa12.66□□□□□ -0.38
RPE-207ENST00000435437 PCGF6Q9BYE7 350 aa12.66□□□□□ -0.38
RPE-207ENST00000435437 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
RPE-207ENST00000435437 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
RPE-207ENST00000435437 USP19O94966 1318 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 COL18A1P39060 1754 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 SLIT3O75094 1523 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
RPE-207ENST00000435437 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 UNC5CLQ8IV45 518 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
RPE-207ENST00000435437 TRPC5Q9UL62 973 aaPredicted RBP12.64□□□□□ -0.39
RPE-207ENST00000435437 GJD4Q96KN9 370 aaPredicted RBP12.63□□□□□ -0.39
RPE-207ENST00000435437 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
RPE-207ENST00000435437 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
RPE-207ENST00000435437 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
RPE-207ENST00000435437 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
RPE-207ENST00000435437 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
RPE-207ENST00000435437 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
RPE-207ENST00000435437 VPS72Q15906 364 aa12.6□□□□□ -0.39
RPE-207ENST00000435437 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
RPE-207ENST00000435437 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
RPE-207ENST00000435437 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
RPE-207ENST00000435437 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
RPE-207ENST00000435437 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
RPE-207ENST00000435437 NFAT5O94916 1531 aa12.58□□□□□ -0.4
RPE-207ENST00000435437 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
RPE-207ENST00000435437 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.4
RPE-207ENST00000435437 MYOM1P52179 1685 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 CPDO75976 1380 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 ATAD2Q6PL18 1390 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
RPE-207ENST00000435437 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 SLC12A5Q9H2X9 1139 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 CLSPNQ9HAW4 1339 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 EP400Q96L91 3159 aa12.57□□□□□ -0.4
RPE-207ENST00000435437 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
RPE-207ENST00000435437 SPATA31A5Q5VU36 1347 aa12.56□□□□□ -0.4
RPE-207ENST00000435437 SPATA31A7Q8IWB4 1347 aa12.56□□□□□ -0.4
RPE-207ENST00000435437 USP47Q96K76 1375 aa12.56□□□□□ -0.4
RPE-207ENST00000435437 GCP02774 474 aa12.55□□□□□ -0.4
RPE-207ENST00000435437 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
RPE-207ENST00000435437 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
RPE-207ENST00000435437 SEPT12Q8IYM1 358 aa12.54□□□□□ -0.4
RPE-207ENST00000435437 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
RPE-207ENST00000435437 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
RPE-207ENST00000435437 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
RPE-207ENST00000435437 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
RPE-207ENST00000435437 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
RPE-207ENST00000435437 KTN1Q86UP2 1357 aaKnown RBP12.53□□□□□ -0.4
RPE-207ENST00000435437 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
RPE-207ENST00000435437 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
RPE-207ENST00000435437 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
RPE-207ENST00000435437 NME9Q86XW9 330 aa12.52□□□□□ -0.41
RPE-207ENST00000435437 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.41
RPE-207ENST00000435437 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
RPE-207ENST00000435437 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
RPE-207ENST00000435437 LTN1O94822 1766 aa12.51□□□□□ -0.41
RPE-207ENST00000435437 NLRP6P59044 892 aa12.51□□□□□ -0.41
RPE-207ENST00000435437 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
RPE-207ENST00000435437 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
RPE-207ENST00000435437 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
RPE-207ENST00000435437 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
RPE-207ENST00000435437 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
RPE-207ENST00000435437 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
RPE-207ENST00000435437 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
RPE-207ENST00000435437 TNS1Q9HBL0 1735 aaKnown RBP12.5□□□□□ -0.41
RPE-207ENST00000435437 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
RPE-207ENST00000435437 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
RPE-207ENST00000435437 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
RPE-207ENST00000435437 POTEHQ6S545 545 aa12.49□□□□□ -0.41
RPE-207ENST00000435437 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
RPE-207ENST00000435437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.417e-7■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms