RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 DESI1Q6ICB0 168 aa11.59□□□□□ -0.55
USP9YP28-201ENST00000435142 PURBQ96QR8 312 aaKnown RBP11.59□□□□□ -0.55
USP9YP28-201ENST00000435142 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
USP9YP28-201ENST00000435142 TIMP2P16035 220 aa11.58□□□□□ -0.56
USP9YP28-201ENST00000435142 WDR4P57081 412 aaKnown RBP11.58□□□□□ -0.56
USP9YP28-201ENST00000435142 MTMR2Q13614 643 aa11.58□□□□□ -0.56
USP9YP28-201ENST00000435142 ADH1CP00326 375 aa11.57□□□□□ -0.56
USP9YP28-201ENST00000435142 SOBPA7XYQ1 873 aa11.55□□□□□ -0.56
USP9YP28-201ENST00000435142 CTHP32929 405 aa11.55□□□□□ -0.56
USP9YP28-201ENST00000435142 FAM174AQ8TBP5 190 aa11.55□□□□□ -0.56
USP9YP28-201ENST00000435142 KLF16Q9BXK1 252 aaPredicted RBP11.55□□□□□ -0.56
USP9YP28-201ENST00000435142 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
USP9YP28-201ENST00000435142 LYPD8Q6UX82 237 aa11.52□□□□□ -0.57
USP9YP28-201ENST00000435142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP9YP28-201ENST00000435142 CDK15Q96Q40 435 aa11.51□□□□□ -0.57
USP9YP28-201ENST00000435142 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
USP9YP28-201ENST00000435142 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
USP9YP28-201ENST00000435142 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
USP9YP28-201ENST00000435142 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
USP9YP28-201ENST00000435142 MAN1A2O60476 641 aa11.48□□□□□ -0.57
USP9YP28-201ENST00000435142 ZIC2O95409 532 aaPredicted RBP11.48□□□□□ -0.57
USP9YP28-201ENST00000435142 GJA5P36382 358 aa11.48□□□□□ -0.57
USP9YP28-201ENST00000435142 AMHR2Q16671 573 aa11.47□□□□□ -0.57
USP9YP28-201ENST00000435142 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
USP9YP28-201ENST00000435142 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
USP9YP28-201ENST00000435142 ZFAND3Q9H8U3 227 aa11.47□□□□□ -0.57
USP9YP28-201ENST00000435142 NR5A1Q13285 461 aa11.46□□□□□ -0.57
USP9YP28-201ENST00000435142 C6orf118Q5T5N4 469 aa11.46□□□□□ -0.57
USP9YP28-201ENST00000435142 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.57
USP9YP28-201ENST00000435142 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
USP9YP28-201ENST00000435142 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
USP9YP28-201ENST00000435142 CFAP99D6REC4 459 aa11.45□□□□□ -0.58
USP9YP28-201ENST00000435142 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
USP9YP28-201ENST00000435142 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
USP9YP28-201ENST00000435142 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
USP9YP28-201ENST00000435142 MAP10Q9P2G4 905 aa11.45□□□□□ -0.58
USP9YP28-201ENST00000435142 AGERQ15109 404 aa11.44□□□□□ -0.58
USP9YP28-201ENST00000435142 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
USP9YP28-201ENST00000435142 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
USP9YP28-201ENST00000435142 NR3C2P08235 984 aa11.43□□□□□ -0.58
USP9YP28-201ENST00000435142 GRM5P41594 1212 aa11.43□□□□□ -0.58
USP9YP28-201ENST00000435142 LOC100996750A0A140TA64 210 aa11.42□□□□□ -0.58
USP9YP28-201ENST00000435142 HRCP23327 699 aa11.42□□□□□ -0.58
USP9YP28-201ENST00000435142 KRTAP4-6Q9BYQ5 205 aa11.42□□□□□ -0.58
USP9YP28-201ENST00000435142 SPTLC1O15269 473 aa11.41□□□□□ -0.58
USP9YP28-201ENST00000435142 UPP2O95045 317 aa11.41□□□□□ -0.58
USP9YP28-201ENST00000435142 BMP2P12643 396 aa11.41□□□□□ -0.58
USP9YP28-201ENST00000435142 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
USP9YP28-201ENST00000435142 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
USP9YP28-201ENST00000435142 ZMYND10O75800 440 aa11.4□□□□□ -0.58
USP9YP28-201ENST00000435142 BPHLQ86WA6 291 aaPredicted RBP11.4□□□□□ -0.58
USP9YP28-201ENST00000435142 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
USP9YP28-201ENST00000435142 KCNMA1Q12791 1236 aa11.38□□□□□ -0.59
USP9YP28-201ENST00000435142 PRPF38BQ5VTL8 546 aaKnown RBP11.37□□□□□ -0.59
USP9YP28-201ENST00000435142 MEIOBQ8N635 442 aa11.37□□□□□ -0.59
USP9YP28-201ENST00000435142 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
USP9YP28-201ENST00000435142 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
USP9YP28-201ENST00000435142 CABLES1Q8TDN4 633 aa11.36□□□□□ -0.59
USP9YP28-201ENST00000435142 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
USP9YP28-201ENST00000435142 DNMT3LQ9UJW3 386 aa11.34□□□□□ -0.59
USP9YP28-201ENST00000435142 SUZ12Q15022 739 aaKnown RBP11.33□□□□□ -0.6
USP9YP28-201ENST00000435142 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
USP9YP28-201ENST00000435142 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
USP9YP28-201ENST00000435142 ARMC2Q8NEN0 867 aa11.33□□□□□ -0.6
USP9YP28-201ENST00000435142 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
USP9YP28-201ENST00000435142 GSK3AP49840 483 aa11.32□□□□□ -0.6
USP9YP28-201ENST00000435142 KCTD17Q8N5Z5 321 aa11.32□□□□□ -0.6
USP9YP28-201ENST00000435142 TSC1Q92574 1164 aa11.32□□□□□ -0.6
USP9YP28-201ENST00000435142 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
USP9YP28-201ENST00000435142 FSHRP23945 695 aa11.31□□□□□ -0.6
USP9YP28-201ENST00000435142 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
USP9YP28-201ENST00000435142 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
USP9YP28-201ENST00000435142 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
USP9YP28-201ENST00000435142 GPR161Q8N6U8 529 aaKnown RBP11.3□□□□□ -0.6
USP9YP28-201ENST00000435142 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
USP9YP28-201ENST00000435142 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 CNTNAP3BQ96NU0 1288 aa11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 CNTNAP3Q9BZ76 1288 aa11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
USP9YP28-201ENST00000435142 KRT76Q01546 638 aa11.28□□□□□ -0.6
USP9YP28-201ENST00000435142 TTLL8A6PVC2 850 aa11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 TRIM66O15016 1216 aa11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 TMEM151AQ8N4L1 468 aa11.27□□□□□ -0.61
USP9YP28-201ENST00000435142 PTSQ03393 145 aa11.26□□□□□ -0.61
USP9YP28-201ENST00000435142 QPCTQ16769 361 aa11.26□□□□□ -0.61
USP9YP28-201ENST00000435142 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
USP9YP28-201ENST00000435142 ADAMTS8Q9UP79 889 aa11.26□□□□□ -0.61
USP9YP28-201ENST00000435142 MAGEB6P1A0A0J9YX57 407 aa11.25□□□□□ -0.61
USP9YP28-201ENST00000435142 RASSF7Q02833 373 aa11.25□□□□□ -0.61
USP9YP28-201ENST00000435142 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
USP9YP28-201ENST00000435142 FIGNL2A6NMB9 653 aa11.24□□□□□ -0.61
USP9YP28-201ENST00000435142 GDF11O95390 407 aa11.24□□□□□ -0.61
USP9YP28-201ENST00000435142 LILRB3O75022 631 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms