RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 KCNA6P17658 529 aa13.35□□□□□ -0.27
NOD1-206ENST00000434755 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
NOD1-206ENST00000434755 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
NOD1-206ENST00000434755 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
NOD1-206ENST00000434755 ZMYM4Q5VZL5 1548 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 DIP2CQ9Y2E4 1556 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 RIPK4P57078 832 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
NOD1-206ENST00000434755 FCHSD2O94868 740 aa13.33□□□□□ -0.27
NOD1-206ENST00000434755 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
NOD1-206ENST00000434755 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
NOD1-206ENST00000434755 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
NOD1-206ENST00000434755 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
NOD1-206ENST00000434755 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 TTC21BQ7Z4L5 1316 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
NOD1-206ENST00000434755 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
NOD1-206ENST00000434755 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
NOD1-206ENST00000434755 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
NOD1-206ENST00000434755 COG6Q9Y2V7 657 aa13.3□□□□□ -0.28
NOD1-206ENST00000434755 HMMRO75330 724 aa13.29□□□□□ -0.28
NOD1-206ENST00000434755 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
NOD1-206ENST00000434755 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
NOD1-206ENST00000434755 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
NOD1-206ENST00000434755 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
NOD1-206ENST00000434755 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
NOD1-206ENST00000434755 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
NOD1-206ENST00000434755 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
NOD1-206ENST00000434755 ACEP12821 1306 aa13.28□□□□□ -0.28
NOD1-206ENST00000434755 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
NOD1-206ENST00000434755 GOLGA6L22H0YM25 854 aa13.27□□□□□ -0.28
NOD1-206ENST00000434755 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.28
NOD1-206ENST00000434755 PLA2R1Q13018 1463 aa13.27□□□□□ -0.28
NOD1-206ENST00000434755 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.28
NOD1-206ENST00000434755 SPG7Q9UQ90 795 aa13.27□□□□□ -0.28
NOD1-206ENST00000434755 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
NOD1-206ENST00000434755 TOM1O60784 492 aa13.27□□□□□ -0.29
NOD1-206ENST00000434755 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.29
NOD1-206ENST00000434755 A2ML1A8K2U0 1454 aa13.27□□□□□ -0.29
NOD1-206ENST00000434755 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
NOD1-206ENST00000434755 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
NOD1-206ENST00000434755 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
NOD1-206ENST00000434755 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
NOD1-206ENST00000434755 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
NOD1-206ENST00000434755 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
NOD1-206ENST00000434755 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
NOD1-206ENST00000434755 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
NOD1-206ENST00000434755 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
NOD1-206ENST00000434755 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
NOD1-206ENST00000434755 CFAP65Q6ZU64 1925 aaKnown RBP13.26□□□□□ -0.29
NOD1-206ENST00000434755 SYNMO15061 1565 aa13.26□□□□□ -0.29
NOD1-206ENST00000434755 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
NOD1-206ENST00000434755 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
NOD1-206ENST00000434755 TAF7LQ5H9L4 462 aa13.25□□□□□ -0.29
NOD1-206ENST00000434755 ABCA6Q8N139 1617 aa13.25□□□□□ -0.29
NOD1-206ENST00000434755 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
NOD1-206ENST00000434755 GORABQ5T7V8 394 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
NOD1-206ENST00000434755 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
NOD1-206ENST00000434755 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
NOD1-206ENST00000434755 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
NOD1-206ENST00000434755 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
NOD1-206ENST00000434755 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
NOD1-206ENST00000434755 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
NOD1-206ENST00000434755 LAMC1P11047 1609 aa13.22□□□□□ -0.29
NOD1-206ENST00000434755 FOXO3O43524 673 aa13.22□□□□□ -0.29
NOD1-206ENST00000434755 PDE4AP27815 886 aa13.22□□□□□ -0.29
NOD1-206ENST00000434755 NME9Q86XW9 330 aa13.22□□□□□ -0.29
NOD1-206ENST00000434755 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
NOD1-206ENST00000434755 REREQ9P2R6 1566 aa13.22□□□□□ -0.29
NOD1-206ENST00000434755 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
NOD1-206ENST00000434755 ISY1Q9ULR0 285 aaKnown RBP13.22□□□□□ -0.29
NOD1-206ENST00000434755 CLTCL1P53675 1640 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 IL16Q14005 1332 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
NOD1-206ENST00000434755 LTKP29376 864 aa13.21□□□□□ -0.3
NOD1-206ENST00000434755 PTMSP20962 102 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 WWC1Q8IX03 1113 aa13.2□□□□□ -0.3
NOD1-206ENST00000434755 MCCP23508 829 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms