RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 BTG4Q9NY30 223 aa19.1■□□□□ 0.65
EDEM1-202ENST00000434243 SEPT12Q8IYM1 358 aa19.09■□□□□ 0.65
EDEM1-202ENST00000434243 PLEKHG3A1L390 1219 aa19.08■□□□□ 0.64
EDEM1-202ENST00000434243 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
EDEM1-202ENST00000434243 TRPM3Q9HCF6 1732 aaPredicted RBP19.07■□□□□ 0.64
EDEM1-202ENST00000434243 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
EDEM1-202ENST00000434243 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
EDEM1-202ENST00000434243 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.05■□□□□ 0.64
EDEM1-202ENST00000434243 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
EDEM1-202ENST00000434243 ABTB2Q8N961 1025 aa19.05■□□□□ 0.64
EDEM1-202ENST00000434243 GLI3P10071 1580 aa19.05■□□□□ 0.64
EDEM1-202ENST00000434243 PPIP5K1Q6PFW1 1433 aa19.04■□□□□ 0.64
EDEM1-202ENST00000434243 ALS2Q96Q42 1657 aa19.04■□□□□ 0.64
EDEM1-202ENST00000434243 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
EDEM1-202ENST00000434243 CHRNA2Q15822 529 aa19.03■□□□□ 0.64
EDEM1-202ENST00000434243 FAM98CQ17RN3 349 aaKnown RBP19.03■□□□□ 0.64
EDEM1-202ENST00000434243 CCDC125Q86Z20 511 aa19.03■□□□□ 0.64
EDEM1-202ENST00000434243 CABP1Q9NZU7 370 aa19.03■□□□□ 0.64
EDEM1-202ENST00000434243 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
EDEM1-202ENST00000434243 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
EDEM1-202ENST00000434243 KIAA0232Q92628 1395 aa19.02■□□□□ 0.64
EDEM1-202ENST00000434243 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
EDEM1-202ENST00000434243 KRT27Q7Z3Y8 459 aa19.01■□□□□ 0.63
EDEM1-202ENST00000434243 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
EDEM1-202ENST00000434243 ONECUT3O60422 494 aaPredicted RBP19■□□□□ 0.63
EDEM1-202ENST00000434243 TRIM26Q12899 539 aaPredicted RBP19■□□□□ 0.63
EDEM1-202ENST00000434243 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
EDEM1-202ENST00000434243 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
EDEM1-202ENST00000434243 EVA1CP58658 441 aa18.99■□□□□ 0.63
EDEM1-202ENST00000434243 SF3B2Q13435 895 aaKnown RBP18.99■□□□□ 0.63
EDEM1-202ENST00000434243 NLRP13Q86W25 1043 aa18.99■□□□□ 0.63
EDEM1-202ENST00000434243 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
EDEM1-202ENST00000434243 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
EDEM1-202ENST00000434243 TOPAZ1Q8N9V7 1692 aa18.97■□□□□ 0.63
EDEM1-202ENST00000434243 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
EDEM1-202ENST00000434243 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
EDEM1-202ENST00000434243 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
EDEM1-202ENST00000434243 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
EDEM1-202ENST00000434243 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
EDEM1-202ENST00000434243 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
EDEM1-202ENST00000434243 BLMP54132 1417 aaPredicted RBP18.95■□□□□ 0.62
EDEM1-202ENST00000434243 NLRP6P59044 892 aa18.95■□□□□ 0.62
EDEM1-202ENST00000434243 GCP02774 474 aa18.94■□□□□ 0.62
EDEM1-202ENST00000434243 ZRANB1Q9UGI0 708 aa18.94■□□□□ 0.62
EDEM1-202ENST00000434243 USP19O94966 1318 aa18.93■□□□□ 0.62
EDEM1-202ENST00000434243 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
EDEM1-202ENST00000434243 USP6P35125 1406 aa18.92■□□□□ 0.62
EDEM1-202ENST00000434243 NRAPQ86VF7 1730 aa18.92■□□□□ 0.62
EDEM1-202ENST00000434243 DEFB132Q7Z7B7 95 aa18.92■□□□□ 0.62
EDEM1-202ENST00000434243 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
EDEM1-202ENST00000434243 FAM182BQ5T319 152 aa18.91■□□□□ 0.62
EDEM1-202ENST00000434243 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
EDEM1-202ENST00000434243 CRYBG1Q9Y4K1 1723 aa18.91■□□□□ 0.62
EDEM1-202ENST00000434243 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
EDEM1-202ENST00000434243 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
EDEM1-202ENST00000434243 CPDO75976 1380 aa18.88■□□□□ 0.61
EDEM1-202ENST00000434243 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
EDEM1-202ENST00000434243 SOX12O15370 315 aa18.87■□□□□ 0.61
EDEM1-202ENST00000434243 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
EDEM1-202ENST00000434243 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
EDEM1-202ENST00000434243 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
EDEM1-202ENST00000434243 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
EDEM1-202ENST00000434243 BAG6P46379 1132 aa18.86■□□□□ 0.61
EDEM1-202ENST00000434243 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
EDEM1-202ENST00000434243 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
EDEM1-202ENST00000434243 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
EDEM1-202ENST00000434243 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
EDEM1-202ENST00000434243 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
EDEM1-202ENST00000434243 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
EDEM1-202ENST00000434243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.83■□□□□ 0.6
EDEM1-202ENST00000434243 KCNH5Q8NCM2 988 aa18.83■□□□□ 0.6
EDEM1-202ENST00000434243 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
EDEM1-202ENST00000434243 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
EDEM1-202ENST00000434243 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
EDEM1-202ENST00000434243 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
EDEM1-202ENST00000434243 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
EDEM1-202ENST00000434243 EN1Q05925 392 aaPredicted RBP18.8■□□□□ 0.6
EDEM1-202ENST00000434243 SLC12A5Q9H2X9 1139 aa18.8■□□□□ 0.6
EDEM1-202ENST00000434243 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
EDEM1-202ENST00000434243 AATKQ6ZMQ8 1374 aa18.8■□□□□ 0.6
EDEM1-202ENST00000434243 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
EDEM1-202ENST00000434243 TRIM37O94972 964 aa18.79■□□□□ 0.6
EDEM1-202ENST00000434243 SLIT3O75094 1523 aa18.79■□□□□ 0.6
EDEM1-202ENST00000434243 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
EDEM1-202ENST00000434243 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
EDEM1-202ENST00000434243 CSB-PGBD3P0DP91 1061 aa18.78■□□□□ 0.6
EDEM1-202ENST00000434243 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
EDEM1-202ENST00000434243 AXIN2Q9Y2T1 843 aa18.78■□□□□ 0.6
EDEM1-202ENST00000434243 CRB1P82279 1406 aa18.77■□□□□ 0.6
EDEM1-202ENST00000434243 LMO7Q8WWI1 1683 aa18.77■□□□□ 0.6
EDEM1-202ENST00000434243 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
EDEM1-202ENST00000434243 NME9Q86XW9 330 aa18.76■□□□□ 0.59
EDEM1-202ENST00000434243 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
EDEM1-202ENST00000434243 APBA3O96018 575 aa18.75■□□□□ 0.59
EDEM1-202ENST00000434243 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
EDEM1-202ENST00000434243 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
EDEM1-202ENST00000434243 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
EDEM1-202ENST00000434243 EZH2Q15910 746 aaKnown RBP18.73■□□□□ 0.59
EDEM1-202ENST00000434243 PUS7Q96PZ0 661 aaKnown RBP18.73■□□□□ 0.59
EDEM1-202ENST00000434243 TESK2Q96S53 571 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms