RNA–Protein interactions for RNA: ENST00000433568.5

UBE2F-209, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-209ENST00000433568 ABCA3Q99758 1704 aa27.87■■■□□ 2.05
UBE2F-209ENST00000433568 MARF1Q9Y4F3 1742 aaKnown RBP27.87■■■□□ 2.05
UBE2F-209ENST00000433568 BCL9LQ86UU0 1499 aa27.86■■■□□ 2.05
UBE2F-209ENST00000433568 CLSPNQ9HAW4 1339 aa27.86■■■□□ 2.05
UBE2F-209ENST00000433568 ST20-MTHFSA0A0A6YYL1 179 aa27.84■■■□□ 2.05
UBE2F-209ENST00000433568 FAM83GA6ND36 823 aa27.83■■■□□ 2.05
UBE2F-209ENST00000433568 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
UBE2F-209ENST00000433568 TRPC5Q9UL62 973 aaPredicted RBP27.82■■■□□ 2.04
UBE2F-209ENST00000433568 ATRNO75882 1429 aa27.81■■■□□ 2.04
UBE2F-209ENST00000433568 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
UBE2F-209ENST00000433568 SBNO2Q9Y2G9 1366 aa27.8■■■□□ 2.04
UBE2F-209ENST00000433568 SLIT2O94813 1529 aa27.8■■■□□ 2.04
UBE2F-209ENST00000433568 RGS12O14924 1447 aa27.78■■■□□ 2.04
UBE2F-209ENST00000433568 UNC5CLQ8IV45 518 aa27.78■■■□□ 2.04
UBE2F-209ENST00000433568 TESK2Q96S53 571 aa27.78■■■□□ 2.04
UBE2F-209ENST00000433568 USP6P35125 1406 aa27.77■■■□□ 2.04
UBE2F-209ENST00000433568 ATAD2Q6PL18 1390 aa27.76■■■□□ 2.03
UBE2F-209ENST00000433568 CRYBG1Q9Y4K1 1723 aa27.76■■■□□ 2.03
UBE2F-209ENST00000433568 USP47Q96K76 1375 aa27.75■■■□□ 2.03
UBE2F-209ENST00000433568 ZC3H6P61129 1189 aaKnown RBP27.75■■■□□ 2.03
UBE2F-209ENST00000433568 TMC1Q8TDI8 760 aa27.75■■■□□ 2.03
UBE2F-209ENST00000433568 TIMELESSQ9UNS1 1208 aa27.75■■■□□ 2.03
UBE2F-209ENST00000433568 CHRNA2Q15822 529 aa27.74■■■□□ 2.03
UBE2F-209ENST00000433568 PLCH1Q4KWH8 1693 aa27.73■■■□□ 2.03
UBE2F-209ENST00000433568 GJD4Q96KN9 370 aaPredicted RBP27.72■■■□□ 2.03
UBE2F-209ENST00000433568 SLC12A5Q9H2X9 1139 aa27.72■■■□□ 2.03
UBE2F-209ENST00000433568 PRDM11Q9NQV5 511 aa27.72■■■□□ 2.03
UBE2F-209ENST00000433568 BTG4Q9NY30 223 aa27.72■■■□□ 2.03
UBE2F-209ENST00000433568 KIAA0232Q92628 1395 aa27.72■■■□□ 2.03
UBE2F-209ENST00000433568 SSH2Q76I76 1423 aa27.71■■■□□ 2.03
UBE2F-209ENST00000433568 PHRF1Q9P1Y6 1649 aaKnown RBP27.7■■■□□ 2.03
UBE2F-209ENST00000433568 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.03
UBE2F-209ENST00000433568 CCDC9Q9Y3X0 531 aaKnown RBP27.7■■■□□ 2.02
UBE2F-209ENST00000433568 NLRP6P59044 892 aa27.69■■■□□ 2.02
UBE2F-209ENST00000433568 USP19O94966 1318 aa27.68■■■□□ 2.02
UBE2F-209ENST00000433568 TTC21BQ7Z4L5 1316 aa27.68■■■□□ 2.02
UBE2F-209ENST00000433568 CPSF1Q10570 1443 aaKnown RBP27.68■■■□□ 2.02
UBE2F-209ENST00000433568 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
UBE2F-209ENST00000433568 NLRP13Q86W25 1043 aa27.67■■■□□ 2.02
UBE2F-209ENST00000433568 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.67■■■□□ 2.02
UBE2F-209ENST00000433568 GLI3P10071 1580 aa27.66■■■□□ 2.02
UBE2F-209ENST00000433568 CD163L1Q9NR16 1453 aa27.66■■■□□ 2.02
UBE2F-209ENST00000433568 ZNF692Q9BU19 519 aaPredicted RBP27.66■■■□□ 2.02
UBE2F-209ENST00000433568 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
UBE2F-209ENST00000433568 AKAP12Q02952 1782 aa27.65■■■□□ 2.02
UBE2F-209ENST00000433568 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
UBE2F-209ENST00000433568 ZBTB7CA1YPR0 619 aa27.65■■■□□ 2.02
UBE2F-209ENST00000433568 VPS72Q15906 364 aa27.65■■■□□ 2.02
UBE2F-209ENST00000433568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
UBE2F-209ENST00000433568 COL14A1Q05707 1796 aaKnown RBP27.65■■■□□ 2.02
UBE2F-209ENST00000433568 GCP02774 474 aa27.64■■■□□ 2.02
UBE2F-209ENST00000433568 PIK3C2AO00443 1686 aa27.64■■■□□ 2.02
UBE2F-209ENST00000433568 BRD4O60885 1362 aaPredicted RBP27.63■■■□□ 2.01
UBE2F-209ENST00000433568 NWD2Q9ULI1 1742 aa27.63■■■□□ 2.01
UBE2F-209ENST00000433568 NRAPQ86VF7 1730 aa27.62■■■□□ 2.01
UBE2F-209ENST00000433568 SOX12O15370 315 aa27.62■■■□□ 2.01
UBE2F-209ENST00000433568 STRN4Q9NRL3 753 aa27.62■■■□□ 2.01
UBE2F-209ENST00000433568 A0A1W2PP64 1363 aa27.6■■■□□ 2.01
UBE2F-209ENST00000433568 TMF1P82094 1093 aa27.59■■■□□ 2.01
UBE2F-209ENST00000433568 HDGFL2Q7Z4V5 671 aaPredicted RBP27.59■■■□□ 2.01
UBE2F-209ENST00000433568 NME9Q86XW9 330 aa27.59■■■□□ 2.01
UBE2F-209ENST00000433568 UPF1Q92900 1129 aaKnown RBP eCLIP27.59■■■□□ 2.01
UBE2F-209ENST00000433568 PUS7Q96PZ0 661 aaKnown RBP27.57■■■□□ 2
UBE2F-209ENST00000433568 MON2Q7Z3U7 1717 aa27.57■■■□□ 2
UBE2F-209ENST00000433568 TTC21AQ8NDW8 1320 aa27.57■■■□□ 2
UBE2F-209ENST00000433568 SLIT3O75094 1523 aa27.56■■■□□ 2
UBE2F-209ENST00000433568 SEPT12Q8IYM1 358 aa27.55■■■□□ 2
UBE2F-209ENST00000433568 CPDO75976 1380 aa27.54■■■□□ 2
UBE2F-209ENST00000433568 FAM98CQ17RN3 349 aaKnown RBP27.54■■■□□ 2
UBE2F-209ENST00000433568 TERF2IPQ9NYB0 399 aa27.54■■■□□ 2
UBE2F-209ENST00000433568 CAMTA1Q9Y6Y1 1673 aa27.54■■■□□ 2
UBE2F-209ENST00000433568 A0A0G2JS52 829 aa27.53■■■□□ 2
UBE2F-209ENST00000433568 MYT1Q01538 1121 aa27.53■■■□□ 2
UBE2F-209ENST00000433568 SPATA31A5Q5VU36 1347 aa27.52■■■□□ 2
UBE2F-209ENST00000433568 SPATA31A7Q8IWB4 1347 aa27.52■■■□□ 2
UBE2F-209ENST00000433568 USP35Q9P2H5 1018 aa27.52■■■□□ 2
UBE2F-209ENST00000433568 HSPA5P11021 654 aaKnown RBP27.51■■□□□ 1.99
UBE2F-209ENST00000433568 EVA1CP58658 441 aa27.51■■□□□ 1.99
UBE2F-209ENST00000433568 LARP1Q6PKG0 1096 aaKnown RBP27.51■■□□□ 1.99
UBE2F-209ENST00000433568 EDC4Q6P2E9 1401 aaKnown RBP27.5■■□□□ 1.99
UBE2F-209ENST00000433568 SLC24A1O60721 1099 aa27.49■■□□□ 1.99
UBE2F-209ENST00000433568 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
UBE2F-209ENST00000433568 POLR3GLQ9BT43 218 aa27.48■■□□□ 1.99
UBE2F-209ENST00000433568 ONECUT3O60422 494 aaPredicted RBP27.47■■□□□ 1.99
UBE2F-209ENST00000433568 AXIN2Q9Y2T1 843 aa27.47■■□□□ 1.99
UBE2F-209ENST00000433568 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
UBE2F-209ENST00000433568 USP31Q70CQ4 1352 aa27.46■■□□□ 1.99
UBE2F-209ENST00000433568 NINLQ9Y2I6 1382 aa27.46■■□□□ 1.99
UBE2F-209ENST00000433568 EIF4G2P78344 907 aaKnown RBP eCLIP27.45■■□□□ 1.98
UBE2F-209ENST00000433568 ARHGEF25Q86VW2 580 aa27.45■■□□□ 1.98
UBE2F-209ENST00000433568 BRWD3Q6RI45 1802 aa27.45■■□□□ 1.98
UBE2F-209ENST00000433568 KCNH5Q8NCM2 988 aa27.44■■□□□ 1.98
UBE2F-209ENST00000433568 NFAT5O94916 1531 aa27.44■■□□□ 1.98
UBE2F-209ENST00000433568 ANKRD36BQ8N2N9 1353 aa27.44■■□□□ 1.98
UBE2F-209ENST00000433568 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
UBE2F-209ENST00000433568 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
UBE2F-209ENST00000433568 FAM182BQ5T319 152 aa27.42■■□□□ 1.98
UBE2F-209ENST00000433568 CDCA8Q53HL2 280 aa27.41■■□□□ 1.98
UBE2F-209ENST00000433568 FBLN1P23142 703 aa27.4■■□□□ 1.98
UBE2F-209ENST00000433568 KRT27Q7Z3Y8 459 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms