RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 NUDT16Q96DE0 195 aaKnown RBP32.93■■■□□ 2.86
HOMER3-203ENST00000433218 NRKQ7Z2Y5 1582 aa32.91■■■□□ 2.86
HOMER3-203ENST00000433218 NGDNQ8NEJ9 315 aaKnown RBP32.91■■■□□ 2.86
HOMER3-203ENST00000433218 CDK19Q9BWU1 502 aa32.91■■■□□ 2.86
HOMER3-203ENST00000433218 SIN3AQ96ST3 1273 aa32.89■■■□□ 2.86
HOMER3-203ENST00000433218 VPS72Q15906 364 aa32.87■■■□□ 2.85
HOMER3-203ENST00000433218 PAK3O75914 559 aaPredicted RBP32.86■■■□□ 2.85
HOMER3-203ENST00000433218 POLR3AO14802 1390 aaPredicted RBP32.86■■■□□ 2.85
HOMER3-203ENST00000433218 L3MBTL2Q969R5 705 aa32.85■■■□□ 2.85
HOMER3-203ENST00000433218 THSD7AQ9UPZ6 1657 aa32.85■■■□□ 2.85
HOMER3-203ENST00000433218 BTG4Q9NY30 223 aa32.82■■■□□ 2.84
HOMER3-203ENST00000433218 CCDC9Q9Y3X0 531 aaKnown RBP32.82■■■□□ 2.84
HOMER3-203ENST00000433218 ACEP12821 1306 aa32.81■■■□□ 2.84
HOMER3-203ENST00000433218 NUTM2GQ5VZR2 741 aa32.81■■■□□ 2.84
HOMER3-203ENST00000433218 SEPT12Q8IYM1 358 aa32.81■■■□□ 2.84
HOMER3-203ENST00000433218 CENPJQ9HC77 1338 aaPredicted RBP32.8■■■□□ 2.84
HOMER3-203ENST00000433218 PPIP5K1Q6PFW1 1433 aa32.8■■■□□ 2.84
HOMER3-203ENST00000433218 TRIM26Q12899 539 aaPredicted RBP32.79■■■□□ 2.84
HOMER3-203ENST00000433218 LMO7Q8WWI1 1683 aa32.79■■■□□ 2.84
HOMER3-203ENST00000433218 KIAA0232Q92628 1395 aa32.78■■■□□ 2.84
HOMER3-203ENST00000433218 AKAP12Q02952 1782 aa32.77■■■□□ 2.84
HOMER3-203ENST00000433218 PIK3C2AO00443 1686 aa32.77■■■□□ 2.84
HOMER3-203ENST00000433218 CABP2Q9NPB3 220 aa32.76■■■□□ 2.83
HOMER3-203ENST00000433218 NEUROD1Q13562 356 aa32.74■■■□□ 2.83
HOMER3-203ENST00000433218 CCDC61Q9Y6R9 512 aa32.74■■■□□ 2.83
HOMER3-203ENST00000433218 CHRNA2Q15822 529 aa32.73■■■□□ 2.83
HOMER3-203ENST00000433218 NBPF8Q3BBV2 869 aa32.73■■■□□ 2.83
HOMER3-203ENST00000433218 TNS1Q9HBL0 1735 aaKnown RBP32.73■■■□□ 2.83
HOMER3-203ENST00000433218 BLMP54132 1417 aaPredicted RBP32.73■■■□□ 2.83
HOMER3-203ENST00000433218 FAM98CQ17RN3 349 aaKnown RBP32.72■■■□□ 2.83
HOMER3-203ENST00000433218 PRDM11Q9NQV5 511 aa32.72■■■□□ 2.83
HOMER3-203ENST00000433218 PLEKHG3A1L390 1219 aa32.71■■■□□ 2.83
HOMER3-203ENST00000433218 ONECUT3O60422 494 aaPredicted RBP32.71■■■□□ 2.83
HOMER3-203ENST00000433218 SRPK2P78362 688 aaKnown RBP32.71■■■□□ 2.83
HOMER3-203ENST00000433218 RGPD1P0DJD0 1748 aa32.69■■■□□ 2.82
HOMER3-203ENST00000433218 CAMTA1Q9Y6Y1 1673 aa32.68■■■□□ 2.82
HOMER3-203ENST00000433218 ZC3H6P61129 1189 aaKnown RBP32.68■■■□□ 2.82
HOMER3-203ENST00000433218 SPATA31A5Q5VU36 1347 aa32.67■■■□□ 2.82
HOMER3-203ENST00000433218 SPATA31A7Q8IWB4 1347 aa32.67■■■□□ 2.82
HOMER3-203ENST00000433218 A0A0G2JS52 829 aa32.67■■■□□ 2.82
HOMER3-203ENST00000433218 MYT1Q01538 1121 aa32.67■■■□□ 2.82
HOMER3-203ENST00000433218 ROCK2O75116 1388 aaKnown RBP32.66■■■□□ 2.82
HOMER3-203ENST00000433218 DEFB132Q7Z7B7 95 aa32.66■■■□□ 2.82
HOMER3-203ENST00000433218 KRT27Q7Z3Y8 459 aa32.65■■■□□ 2.82
HOMER3-203ENST00000433218 USP19O94966 1318 aa32.65■■■□□ 2.82
HOMER3-203ENST00000433218 FAM182BQ5T319 152 aa32.64■■■□□ 2.82
HOMER3-203ENST00000433218 USP6P35125 1406 aa32.64■■■□□ 2.82
HOMER3-203ENST00000433218 RGPD5Q99666 1765 aa32.64■■■□□ 2.82
HOMER3-203ENST00000433218 MON2Q7Z3U7 1717 aa32.62■■■□□ 2.81
HOMER3-203ENST00000433218 SLIT3O75094 1523 aa32.62■■■□□ 2.81
HOMER3-203ENST00000433218 WNK3Q9BYP7 1800 aa32.61■■■□□ 2.81
HOMER3-203ENST00000433218 ABTB2Q8N961 1025 aa32.6■■■□□ 2.81
HOMER3-203ENST00000433218 COL18A1P39060 1754 aa32.6■■■□□ 2.81
HOMER3-203ENST00000433218 SSH2Q76I76 1423 aa32.6■■■□□ 2.81
HOMER3-203ENST00000433218 CCDC125Q86Z20 511 aa32.6■■■□□ 2.81
HOMER3-203ENST00000433218 STRN4Q9NRL3 753 aa32.6■■■□□ 2.81
HOMER3-203ENST00000433218 SPATA31A1Q5TZJ5 1347 aa32.58■■■□□ 2.81
HOMER3-203ENST00000433218 CABP1Q9NZU7 370 aa32.58■■■□□ 2.81
HOMER3-203ENST00000433218 CPDO75976 1380 aa32.56■■■□□ 2.8
HOMER3-203ENST00000433218 COL5A2P05997 1499 aaPredicted RBP32.54■■■□□ 2.8
HOMER3-203ENST00000433218 PARP4Q9UKK3 1724 aaKnown RBP32.54■■■□□ 2.8
HOMER3-203ENST00000433218 EVC2Q86UK5 1308 aa32.51■■■□□ 2.79
HOMER3-203ENST00000433218 USP35Q9P2H5 1018 aa32.51■■■□□ 2.79
HOMER3-203ENST00000433218 ZRANB1Q9UGI0 708 aa32.5■■■□□ 2.79
HOMER3-203ENST00000433218 LRRC37A3O60309 1634 aa32.49■■■□□ 2.79
HOMER3-203ENST00000433218 LARP1Q6PKG0 1096 aaKnown RBP32.49■■■□□ 2.79
HOMER3-203ENST00000433218 GCP02774 474 aa32.47■■■□□ 2.79
HOMER3-203ENST00000433218 USP54Q70EL1 1684 aa32.47■■■□□ 2.79
HOMER3-203ENST00000433218 NLRP13Q86W25 1043 aa32.45■■■□□ 2.79
HOMER3-203ENST00000433218 NFAT5O94916 1531 aa32.45■■■□□ 2.79
HOMER3-203ENST00000433218 BRD4O60885 1362 aaPredicted RBP32.45■■■□□ 2.78
HOMER3-203ENST00000433218 RREB1Q92766 1687 aa32.44■■■□□ 2.78
HOMER3-203ENST00000433218 CD163L1Q9NR16 1453 aa32.44■■■□□ 2.78
HOMER3-203ENST00000433218 LTN1O94822 1766 aa32.44■■■□□ 2.78
HOMER3-203ENST00000433218 SF3B2Q13435 895 aaKnown RBP32.43■■■□□ 2.78
HOMER3-203ENST00000433218 CPSF1Q10570 1443 aaKnown RBP32.43■■■□□ 2.78
HOMER3-203ENST00000433218 SBF2Q86WG5 1849 aa32.43■■■□□ 2.78
HOMER3-203ENST00000433218 ZBTB7CA1YPR0 619 aa32.43■■■□□ 2.78
HOMER3-203ENST00000433218 PEAK1Q9H792 1746 aa32.42■■■□□ 2.78
HOMER3-203ENST00000433218 NLRP6P59044 892 aa32.42■■■□□ 2.78
HOMER3-203ENST00000433218 PCGF6Q9BYE7 350 aa32.41■■■□□ 2.78
HOMER3-203ENST00000433218 SBNO2Q9Y2G9 1366 aa32.41■■■□□ 2.78
HOMER3-203ENST00000433218 NUP188Q5SRE5 1749 aa32.41■■■□□ 2.78
HOMER3-203ENST00000433218 TONSLQ96HA7 1378 aa32.4■■■□□ 2.78
HOMER3-203ENST00000433218 LRP5O75197 1615 aa32.38■■■□□ 2.77
HOMER3-203ENST00000433218 TTC21BQ7Z4L5 1316 aa32.38■■■□□ 2.77
HOMER3-203ENST00000433218 EVA1CP58658 441 aa32.38■■■□□ 2.77
HOMER3-203ENST00000433218 DISP2A7MBM2 1401 aa32.37■■■□□ 2.77
HOMER3-203ENST00000433218 EN1Q05925 392 aaPredicted RBP32.36■■■□□ 2.77
HOMER3-203ENST00000433218 CARD11Q9BXL7 1154 aa32.36■■■□□ 2.77
HOMER3-203ENST00000433218 CRB1P82279 1406 aa32.36■■■□□ 2.77
HOMER3-203ENST00000433218 BARGINQ6ZT62 677 aa32.35■■■□□ 2.77
HOMER3-203ENST00000433218 BAG6P46379 1132 aa32.34■■■□□ 2.77
HOMER3-203ENST00000433218 AATKQ6ZMQ8 1374 aa32.34■■■□□ 2.77
HOMER3-203ENST00000433218 SOX12O15370 315 aa32.34■■■□□ 2.77
HOMER3-203ENST00000433218 KTN1Q86UP2 1357 aaKnown RBP32.33■■■□□ 2.77
HOMER3-203ENST00000433218 TCP11L2Q8N4U5 519 aa32.33■■■□□ 2.77
HOMER3-203ENST00000433218 PSDA5PKW4 1024 aaPredicted RBP32.32■■■□□ 2.76
HOMER3-203ENST00000433218 TRIM37O94972 964 aa32.32■■■□□ 2.76
HOMER3-203ENST00000433218 AXIN2Q9Y2T1 843 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms