RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 KTN1Q86UP2 1357 aaKnown RBP6.15□□□□□ -1.42
UBE4A-202ENST00000431736 RAB3GAP2Q9H2M9 1393 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 SENP3-EIF4A1A0A087X0R7 540 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 MORC1Q86VD1 984 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 YTHDC2Q9H6S0 1430 aaKnown RBP6.15□□□□□ -1.42
UBE4A-202ENST00000431736 ACEP12821 1306 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 TTC21AQ8NDW8 1320 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 ABCC11Q96J66 1382 aa6.15□□□□□ -1.43
UBE4A-202ENST00000431736 IL2RBP14784 551 aa6.15□□□□□ -1.43
UBE4A-202ENST00000431736 C1orf167Q5SNV9 1468 aa6.15□□□□□ -1.43
UBE4A-202ENST00000431736 RBM42Q9BTD8 480 aaKnown RBP6.15□□□□□ -1.43
UBE4A-202ENST00000431736 BLMP54132 1417 aaPredicted RBP6.14□□□□□ -1.43
UBE4A-202ENST00000431736 HRCP23327 699 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 DEPDC5O75140 1603 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 DEFB132Q7Z7B7 95 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 TNS3Q68CZ2 1445 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
UBE4A-202ENST00000431736 SBNO1A3KN83 1393 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 METP08581 1390 aa6.14□□□□□ -1.43
UBE4A-202ENST00000431736 POLR1AO95602 1720 aaPredicted RBP6.14□□□□□ -1.43
UBE4A-202ENST00000431736 ACSBG1Q96GR2 724 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 LMTK2Q8IWU2 1503 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 PLEKHO1Q53GL0 409 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 TMOD3Q9NYL9 352 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 CEP152O94986 1710 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 TET3O43151 1660 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 PIK3C2BO00750 1634 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 PHLPP1O60346 1717 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 FAM83GA6ND36 823 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 BEGAINQ9BUH8 593 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 ARHGAP23Q9P227 1491 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 SOS2Q07890 1332 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 ATF5Q9Y2D1 282 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 LTBP4Q8N2S1 1624 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 BRD4O60885 1362 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 GCP02774 474 aa6.13□□□□□ -1.43
UBE4A-202ENST00000431736 PAXIP1Q6ZW49 1069 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 ZNF142P52746 1687 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-202ENST00000431736 CGNL1Q0VF96 1302 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 USP47Q96K76 1375 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 CCDC7Q96M83 1385 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 ZPR1O75312 459 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 GIGYF1O75420 1035 aaPredicted RBP6.12□□□□□ -1.43
UBE4A-202ENST00000431736 CHMP4AQ9BY43 222 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 PARP3Q9Y6F1 533 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 MAPK8IP3Q9UPT6 1336 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 KCNQ2O43526 872 aa6.12□□□□□ -1.43
UBE4A-202ENST00000431736 FNBP4Q8N3X1 1017 aaPredicted RBP6.12□□□□□ -1.43
UBE4A-202ENST00000431736 CCNL1Q9UK58 526 aaPredicted RBP6.12□□□□□ -1.43
UBE4A-202ENST00000431736 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
UBE4A-202ENST00000431736 TEFQ10587 303 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 ANKARQ7Z5J8 1434 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 CABP4P57796 275 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 ZCRB1Q8TBF4 217 aaKnown RBP6.11□□□□□ -1.43
UBE4A-202ENST00000431736 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 PIK3C2GO75747 1445 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 RFC4P35249 363 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 CCDC87Q9NVE4 849 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
UBE4A-202ENST00000431736 GPBP1L1Q9HC44 474 aaPredicted RBP6.1□□□□□ -1.43
UBE4A-202ENST00000431736 PARD3Q8TEW0 1356 aa6.1□□□□□ -1.43
UBE4A-202ENST00000431736 AIDAQ96BJ3 306 aa6.1□□□□□ -1.43
UBE4A-202ENST00000431736 CFAP44Q96MT7 982 aa6.1□□□□□ -1.43
UBE4A-202ENST00000431736 PHF14O94880 888 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 KIAA0232Q92628 1395 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 L3MBTL2Q969R5 705 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 ASXL1Q8IXJ9 1541 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 MST1RQ04912 1400 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 PPIP5K1Q6PFW1 1433 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 NSD3Q9BZ95 1437 aa6.09□□□□□ -1.43
UBE4A-202ENST00000431736 EZH2Q15910 746 aaKnown RBP6.09□□□□□ -1.44
UBE4A-202ENST00000431736 SLC16A10Q8TF71 515 aa6.09□□□□□ -1.44
UBE4A-202ENST00000431736 FAM182BQ5T319 152 aa6.08□□□□□ -1.44
UBE4A-202ENST00000431736 LARP1Q6PKG0 1096 aaKnown RBP6.08□□□□□ -1.44
UBE4A-202ENST00000431736 RTCBQ9Y3I0 505 aaKnown RBP6.08□□□□□ -1.44
UBE4A-202ENST00000431736 A0A087WZG4 1122 aa6.08□□□□□ -1.44
UBE4A-202ENST00000431736 WDR43Q15061 677 aaKnown RBP eCLIP6.08□□□□□ -1.44
UBE4A-202ENST00000431736 ROBO1Q9Y6N7 1651 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 CDK12Q9NYV4 1490 aaPredicted RBP6.07□□□□□ -1.44
UBE4A-202ENST00000431736 BARGINQ6ZT62 677 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 CLEC11AQ9Y240 323 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 ZFYVE9O95405 1425 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 ADAMTS13Q76LX8 1427 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 KIF1BO60333 1816 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 SPATA31A5Q5VU36 1347 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 TTC21BQ7Z4L5 1316 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 SPATA31A7Q8IWB4 1347 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 DPY19L2Q6NUT2 758 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 ZNF526Q8TF50 670 aaPredicted RBP6.07□□□□□ -1.44
UBE4A-202ENST00000431736 VWDEQ8N2E2 1590 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 OVOS2A0A0G2JMS6 1433 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 OVOS2A0A0J9YW53 1432 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 SLC27A3Q5K4L6 730 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 OVOS2Q6IE36 1432 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 SIN3AQ96ST3 1273 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 CARD10Q9BWT7 1032 aa6.07□□□□□ -1.44
UBE4A-202ENST00000431736 ZNF652Q9Y2D9 606 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms