RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
PTPRK-211ENST00000429595 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
PTPRK-211ENST00000429595 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
PTPRK-211ENST00000429595 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
PTPRK-211ENST00000429595 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-211ENST00000429595 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
PTPRK-211ENST00000429595 BAP1Q92560 729 aa12.49□□□□□ -0.41
PTPRK-211ENST00000429595 AK7Q96M32 723 aa12.49□□□□□ -0.41
PTPRK-211ENST00000429595 SPTLC1O15269 473 aa12.48□□□□□ -0.41
PTPRK-211ENST00000429595 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
PTPRK-211ENST00000429595 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
PTPRK-211ENST00000429595 CFAP99D6REC4 459 aa12.47□□□□□ -0.41
PTPRK-211ENST00000429595 NFX1Q12986 1120 aaKnown RBP12.46□□□□□ -0.41
PTPRK-211ENST00000429595 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
PTPRK-211ENST00000429595 HRCP23327 699 aa12.45□□□□□ -0.42
PTPRK-211ENST00000429595 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
PTPRK-211ENST00000429595 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
PTPRK-211ENST00000429595 WFS1O76024 890 aa12.44□□□□□ -0.42
PTPRK-211ENST00000429595 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
PTPRK-211ENST00000429595 LCE2CQ5TA81 110 aa12.44□□□□□ -0.42
PTPRK-211ENST00000429595 LYPD8Q6UX82 237 aa12.44□□□□□ -0.42
PTPRK-211ENST00000429595 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
PTPRK-211ENST00000429595 SENP2Q9HC62 589 aa12.43□□□□□ -0.42
PTPRK-211ENST00000429595 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
PTPRK-211ENST00000429595 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
PTPRK-211ENST00000429595 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
PTPRK-211ENST00000429595 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
PTPRK-211ENST00000429595 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
PTPRK-211ENST00000429595 BMP1P13497 986 aa12.41□□□□□ -0.42
PTPRK-211ENST00000429595 PDE4DQ08499 809 aa12.41□□□□□ -0.42
PTPRK-211ENST00000429595 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
PTPRK-211ENST00000429595 TRIM46Q7Z4K8 759 aa12.41□□□□□ -0.42
PTPRK-211ENST00000429595 MAP10Q9P2G4 905 aa12.41□□□□□ -0.42
PTPRK-211ENST00000429595 F12P00748 615 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-211ENST00000429595 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.42
PTPRK-211ENST00000429595 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
PTPRK-211ENST00000429595 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
PTPRK-211ENST00000429595 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
PTPRK-211ENST00000429595 CTHP32929 405 aa12.39□□□□□ -0.43
PTPRK-211ENST00000429595 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
PTPRK-211ENST00000429595 CAPN5O15484 640 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-211ENST00000429595 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
PTPRK-211ENST00000429595 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
PTPRK-211ENST00000429595 MYSM1Q5VVJ2 828 aa12.38□□□□□ -0.43
PTPRK-211ENST00000429595 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
PTPRK-211ENST00000429595 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
PTPRK-211ENST00000429595 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-211ENST00000429595 QPCTQ16769 361 aa12.37□□□□□ -0.43
PTPRK-211ENST00000429595 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
PTPRK-211ENST00000429595 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
PTPRK-211ENST00000429595 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
PTPRK-211ENST00000429595 MPNDQ8N594 471 aa12.35□□□□□ -0.43
PTPRK-211ENST00000429595 FOXJ1Q92949 421 aa12.35□□□□□ -0.43
PTPRK-211ENST00000429595 NNTQ13423 1086 aa12.33□□□□□ -0.44
PTPRK-211ENST00000429595 WIPF1O43516 503 aa12.32□□□□□ -0.44
PTPRK-211ENST00000429595 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
PTPRK-211ENST00000429595 LILRB3O75022 631 aa12.31□□□□□ -0.44
PTPRK-211ENST00000429595 TUSC1Q2TAM9 212 aa12.31□□□□□ -0.44
PTPRK-211ENST00000429595 C4orf48Q5BLP8 95 aa12.31□□□□□ -0.44
PTPRK-211ENST00000429595 WDR62O43379 1518 aa12.31□□□□□ -0.44
PTPRK-211ENST00000429595 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
PTPRK-211ENST00000429595 TIMP2P16035 220 aa12.29□□□□□ -0.44
PTPRK-211ENST00000429595 FAM174AQ8TBP5 190 aa12.29□□□□□ -0.44
PTPRK-211ENST00000429595 TSC1Q92574 1164 aa12.29□□□□□ -0.44
PTPRK-211ENST00000429595 KLF16Q9BXK1 252 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-211ENST00000429595 ADH1CP00326 375 aa12.28□□□□□ -0.44
PTPRK-211ENST00000429595 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-211ENST00000429595 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
PTPRK-211ENST00000429595 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-211ENST00000429595 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-211ENST00000429595 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-211ENST00000429595 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-211ENST00000429595 ZFP42Q96MM3 310 aa12.27□□□□□ -0.45
PTPRK-211ENST00000429595 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
PTPRK-211ENST00000429595 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
PTPRK-211ENST00000429595 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
PTPRK-211ENST00000429595 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
PTPRK-211ENST00000429595 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
PTPRK-211ENST00000429595 NR3C2P08235 984 aa12.23□□□□□ -0.45
PTPRK-211ENST00000429595 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
PTPRK-211ENST00000429595 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
PTPRK-211ENST00000429595 GRM5P41594 1212 aa12.22□□□□□ -0.45
PTPRK-211ENST00000429595 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
PTPRK-211ENST00000429595 AGERQ15109 404 aa12.21□□□□□ -0.45
PTPRK-211ENST00000429595 SH3RF1Q7Z6J0 888 aa12.21□□□□□ -0.45
PTPRK-211ENST00000429595 BPHLQ86WA6 291 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-211ENST00000429595 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
PTPRK-211ENST00000429595 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
PTPRK-211ENST00000429595 VEGFBP49765 207 aa12.2□□□□□ -0.46
PTPRK-211ENST00000429595 ITPKCQ96DU7 683 aa12.2□□□□□ -0.46
PTPRK-211ENST00000429595 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
PTPRK-211ENST00000429595 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
PTPRK-211ENST00000429595 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-211ENST00000429595 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-211ENST00000429595 ZIC2O95409 532 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-211ENST00000429595 INSM1Q01101 510 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-211ENST00000429595 NR5A1Q13285 461 aa12.18□□□□□ -0.46
PTPRK-211ENST00000429595 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
PTPRK-211ENST00000429595 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
PTPRK-211ENST00000429595 SCARF1Q14162 830 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms