RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 RTL5Q5HYW3 569 aaPredicted RBP10.06□□□□□ -0.8
LINC00348-201ENST00000428761 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
LINC00348-201ENST00000428761 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
LINC00348-201ENST00000428761 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00348-201ENST00000428761 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
LINC00348-201ENST00000428761 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
LINC00348-201ENST00000428761 TRIM32Q13049 653 aa10.04□□□□□ -0.8
LINC00348-201ENST00000428761 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
LINC00348-201ENST00000428761 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
LINC00348-201ENST00000428761 WNT7AO00755 349 aa10.03□□□□□ -0.8
LINC00348-201ENST00000428761 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
LINC00348-201ENST00000428761 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
LINC00348-201ENST00000428761 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
LINC00348-201ENST00000428761 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
LINC00348-201ENST00000428761 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
LINC00348-201ENST00000428761 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
LINC00348-201ENST00000428761 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
LINC00348-201ENST00000428761 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
LINC00348-201ENST00000428761 SMPD1P17405 629 aa10.01□□□□□ -0.81
LINC00348-201ENST00000428761 PTPRNQ16849 979 aa10.01□□□□□ -0.81
LINC00348-201ENST00000428761 MRGPRX2Q96LB1 330 aa10.01□□□□□ -0.81
LINC00348-201ENST00000428761 WFS1O76024 890 aa10□□□□□ -0.81
LINC00348-201ENST00000428761 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
LINC00348-201ENST00000428761 EVA1BQ9NVM1 165 aa10□□□□□ -0.81
LINC00348-201ENST00000428761 J3QL48 77 aa9.99□□□□□ -0.81
LINC00348-201ENST00000428761 CCNYL3P0C7X3 344 aa9.99□□□□□ -0.81
LINC00348-201ENST00000428761 PODXL2Q9NZ53 605 aa9.99□□□□□ -0.81
LINC00348-201ENST00000428761 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
LINC00348-201ENST00000428761 FLIIQ13045 1269 aa9.98□□□□□ -0.81
LINC00348-201ENST00000428761 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
LINC00348-201ENST00000428761 PCMTD1Q96MG8 357 aaPredicted RBP9.97□□□□□ -0.81
LINC00348-201ENST00000428761 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
LINC00348-201ENST00000428761 ATP13A2Q9NQ11 1180 aa9.97□□□□□ -0.81
LINC00348-201ENST00000428761 KCNH2Q12809 1159 aa9.96□□□□□ -0.82
LINC00348-201ENST00000428761 TSC1Q92574 1164 aa9.96□□□□□ -0.82
LINC00348-201ENST00000428761 CTDSPL2Q05D32 466 aa9.95□□□□□ -0.82
LINC00348-201ENST00000428761 F12P00748 615 aaPredicted RBP9.94□□□□□ -0.82
LINC00348-201ENST00000428761 SNRPBP14678 240 aaKnown RBP9.94□□□□□ -0.82
LINC00348-201ENST00000428761 RC3H1Q5TC82 1133 aaKnown RBP9.94□□□□□ -0.82
LINC00348-201ENST00000428761 HPS1Q92902 700 aa9.94□□□□□ -0.82
LINC00348-201ENST00000428761 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
LINC00348-201ENST00000428761 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
LINC00348-201ENST00000428761 CTHP32929 405 aa9.92□□□□□ -0.82
LINC00348-201ENST00000428761 RFC5P40937 340 aa9.92□□□□□ -0.82
LINC00348-201ENST00000428761 SKOR1P84550 965 aa9.92□□□□□ -0.82
LINC00348-201ENST00000428761 UNC93B1Q9H1C4 597 aa9.92□□□□□ -0.82
LINC00348-201ENST00000428761 MAP10Q9P2G4 905 aa9.92□□□□□ -0.82
LINC00348-201ENST00000428761 SENP2Q9HC62 589 aa9.91□□□□□ -0.82
LINC00348-201ENST00000428761 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
LINC00348-201ENST00000428761 TRIM47Q96LD4 638 aa9.9□□□□□ -0.82
LINC00348-201ENST00000428761 AP1G2O75843 785 aa9.89□□□□□ -0.83
LINC00348-201ENST00000428761 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
LINC00348-201ENST00000428761 WNT7BP56706 349 aa9.89□□□□□ -0.83
LINC00348-201ENST00000428761 LRRN4Q8WUT4 740 aa9.89□□□□□ -0.83
LINC00348-201ENST00000428761 BAP1Q92560 729 aa9.89□□□□□ -0.83
LINC00348-201ENST00000428761 A6NJR5 290 aa9.88□□□□□ -0.83
LINC00348-201ENST00000428761 SH3BP2P78314 561 aa9.88□□□□□ -0.83
LINC00348-201ENST00000428761 APBB1O00213 710 aa9.87□□□□□ -0.83
LINC00348-201ENST00000428761 ARID3AQ99856 593 aa9.87□□□□□ -0.83
LINC00348-201ENST00000428761 TERTO14746 1132 aaKnown RBP9.86□□□□□ -0.83
LINC00348-201ENST00000428761 WIPF1O43516 503 aa9.85□□□□□ -0.83
LINC00348-201ENST00000428761 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
LINC00348-201ENST00000428761 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
LINC00348-201ENST00000428761 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
LINC00348-201ENST00000428761 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
LINC00348-201ENST00000428761 ARID3CA6NKF2 412 aa9.84□□□□□ -0.83
LINC00348-201ENST00000428761 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
LINC00348-201ENST00000428761 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
LINC00348-201ENST00000428761 USP17L8P0C7I0 530 aa9.83□□□□□ -0.84
LINC00348-201ENST00000428761 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
LINC00348-201ENST00000428761 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
LINC00348-201ENST00000428761 NR6A1Q15406 480 aa9.82□□□□□ -0.84
LINC00348-201ENST00000428761 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
LINC00348-201ENST00000428761 SIAH2O43255 324 aa9.81□□□□□ -0.84
LINC00348-201ENST00000428761 TRAK2O60296 914 aa9.81□□□□□ -0.84
LINC00348-201ENST00000428761 EPS8L1Q8TE68 723 aa9.81□□□□□ -0.84
LINC00348-201ENST00000428761 WASF2Q9Y6W5 498 aa9.81□□□□□ -0.84
LINC00348-201ENST00000428761 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
LINC00348-201ENST00000428761 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
LINC00348-201ENST00000428761 BMP1P13497 986 aa9.79□□□□□ -0.84
LINC00348-201ENST00000428761 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
LINC00348-201ENST00000428761 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
LINC00348-201ENST00000428761 CAPN5O15484 640 aaPredicted RBP9.77□□□□□ -0.85
LINC00348-201ENST00000428761 VARSP26640 1264 aaKnown RBP9.77□□□□□ -0.85
LINC00348-201ENST00000428761 MCM6Q14566 821 aa9.77□□□□□ -0.85
LINC00348-201ENST00000428761 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
LINC00348-201ENST00000428761 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
LINC00348-201ENST00000428761 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.85
LINC00348-201ENST00000428761 FKBPLQ9UIM3 349 aa9.77□□□□□ -0.85
LINC00348-201ENST00000428761 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
LINC00348-201ENST00000428761 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
LINC00348-201ENST00000428761 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
LINC00348-201ENST00000428761 SH3RF1Q7Z6J0 888 aa9.75□□□□□ -0.85
LINC00348-201ENST00000428761 GPKOWQ92917 476 aaPredicted RBP eCLIP9.75□□□□□ -0.85
LINC00348-201ENST00000428761 GJD4Q96KN9 370 aaPredicted RBP9.75□□□□□ -0.85
LINC00348-201ENST00000428761 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
LINC00348-201ENST00000428761 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
LINC00348-201ENST00000428761 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
LINC00348-201ENST00000428761 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
LINC00348-201ENST00000428761 AGERQ15109 404 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms