RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
SGCE-204ENST00000428696 KTN1Q86UP2 1357 aaKnown RBP20.19■□□□□ 0.82
SGCE-204ENST00000428696 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
SGCE-204ENST00000428696 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
SGCE-204ENST00000428696 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
SGCE-204ENST00000428696 SPATA31A6Q5VVP1 1343 aa20.16■□□□□ 0.82
SGCE-204ENST00000428696 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
SGCE-204ENST00000428696 ARHGEF10O15013 1369 aa20.14■□□□□ 0.82
SGCE-204ENST00000428696 NLRP6P59044 892 aa20.14■□□□□ 0.81
SGCE-204ENST00000428696 TOPAZ1Q8N9V7 1692 aa20.14■□□□□ 0.81
SGCE-204ENST00000428696 USP6P35125 1406 aa20.13■□□□□ 0.81
SGCE-204ENST00000428696 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
SGCE-204ENST00000428696 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
SGCE-204ENST00000428696 SOX12O15370 315 aa20.11■□□□□ 0.81
SGCE-204ENST00000428696 NLRP13Q86W25 1043 aa20.11■□□□□ 0.81
SGCE-204ENST00000428696 C8orf37Q96NL8 207 aa20.11■□□□□ 0.81
SGCE-204ENST00000428696 ZBTB7CA1YPR0 619 aa20.1■□□□□ 0.81
SGCE-204ENST00000428696 NGLY1Q96IV0 654 aa20.1■□□□□ 0.81
SGCE-204ENST00000428696 KIF7Q2M1P5 1343 aa20.1■□□□□ 0.81
SGCE-204ENST00000428696 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
SGCE-204ENST00000428696 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
SGCE-204ENST00000428696 NME9Q86XW9 330 aa20.09■□□□□ 0.81
SGCE-204ENST00000428696 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
SGCE-204ENST00000428696 PANK3Q9H999 370 aa20.08■□□□□ 0.8
SGCE-204ENST00000428696 BRD4O60885 1362 aaPredicted RBP20.07■□□□□ 0.8
SGCE-204ENST00000428696 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
SGCE-204ENST00000428696 TTC21AQ8NDW8 1320 aa20.07■□□□□ 0.8
SGCE-204ENST00000428696 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
SGCE-204ENST00000428696 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
SGCE-204ENST00000428696 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
SGCE-204ENST00000428696 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
SGCE-204ENST00000428696 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
SGCE-204ENST00000428696 TRPM3Q9HCF6 1732 aaPredicted RBP20.04■□□□□ 0.8
SGCE-204ENST00000428696 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
SGCE-204ENST00000428696 LRP6O75581 1613 aa20.04■□□□□ 0.8
SGCE-204ENST00000428696 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
SGCE-204ENST00000428696 EDC4Q6P2E9 1401 aaKnown RBP20.03■□□□□ 0.8
SGCE-204ENST00000428696 GCP02774 474 aa20.02■□□□□ 0.8
SGCE-204ENST00000428696 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
SGCE-204ENST00000428696 SSH2Q76I76 1423 aa20.02■□□□□ 0.8
SGCE-204ENST00000428696 MED1Q15648 1581 aaPredicted RBP20.02■□□□□ 0.8
SGCE-204ENST00000428696 COG3Q96JB2 828 aa20.02■□□□□ 0.79
SGCE-204ENST00000428696 PRDM11Q9NQV5 511 aa20.02■□□□□ 0.79
SGCE-204ENST00000428696 ADRA2BP18089 450 aa20.01■□□□□ 0.79
SGCE-204ENST00000428696 CHRNA2Q15822 529 aa20.01■□□□□ 0.79
SGCE-204ENST00000428696 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
SGCE-204ENST00000428696 AFF2P51816 1311 aa20■□□□□ 0.79
SGCE-204ENST00000428696 FAM83GA6ND36 823 aa20■□□□□ 0.79
SGCE-204ENST00000428696 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
SGCE-204ENST00000428696 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
SGCE-204ENST00000428696 ALS2Q96Q42 1657 aa19.99■□□□□ 0.79
SGCE-204ENST00000428696 FYB1O15117 783 aa19.99■□□□□ 0.79
SGCE-204ENST00000428696 KCNH5Q8NCM2 988 aa19.98■□□□□ 0.79
SGCE-204ENST00000428696 USP21Q9UK80 565 aa19.98■□□□□ 0.79
SGCE-204ENST00000428696 COL22A1Q8NFW1 1626 aaPredicted RBP19.97■□□□□ 0.79
SGCE-204ENST00000428696 CGNL1Q0VF96 1302 aa19.97■□□□□ 0.79
SGCE-204ENST00000428696 KIAA0232Q92628 1395 aa19.96■□□□□ 0.79
SGCE-204ENST00000428696 USP19O94966 1318 aa19.96■□□□□ 0.79
SGCE-204ENST00000428696 ZNF772Q68DY9 489 aaPredicted RBP19.95■□□□□ 0.78
SGCE-204ENST00000428696 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
SGCE-204ENST00000428696 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
SGCE-204ENST00000428696 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
SGCE-204ENST00000428696 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
SGCE-204ENST00000428696 EVA1CP58658 441 aa19.94■□□□□ 0.78
SGCE-204ENST00000428696 MYOM1P52179 1685 aa19.93■□□□□ 0.78
SGCE-204ENST00000428696 FBLN1P23142 703 aa19.93■□□□□ 0.78
SGCE-204ENST00000428696 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
SGCE-204ENST00000428696 STRN4Q9NRL3 753 aa19.93■□□□□ 0.78
SGCE-204ENST00000428696 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
SGCE-204ENST00000428696 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
SGCE-204ENST00000428696 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
SGCE-204ENST00000428696 FNBP4Q8N3X1 1017 aaPredicted RBP19.92■□□□□ 0.78
SGCE-204ENST00000428696 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
SGCE-204ENST00000428696 NRKQ7Z2Y5 1582 aa19.9■□□□□ 0.78
SGCE-204ENST00000428696 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
SGCE-204ENST00000428696 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
SGCE-204ENST00000428696 POTEAQ6S8J7 498 aa19.9■□□□□ 0.78
SGCE-204ENST00000428696 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
SGCE-204ENST00000428696 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
SGCE-204ENST00000428696 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
SGCE-204ENST00000428696 AMPHP49418 695 aa19.88■□□□□ 0.77
SGCE-204ENST00000428696 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
SGCE-204ENST00000428696 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
SGCE-204ENST00000428696 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
SGCE-204ENST00000428696 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
SGCE-204ENST00000428696 RXRBP28702 533 aa19.86■□□□□ 0.77
SGCE-204ENST00000428696 LTV1Q96GA3 475 aaPredicted RBP19.85■□□□□ 0.77
SGCE-204ENST00000428696 USP35Q9P2H5 1018 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 CPDO75976 1380 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 OVOS2A0A0J9YW53 1432 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 OVOS2Q6IE36 1432 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 PHRF1Q9P1Y6 1649 aaKnown RBP19.85■□□□□ 0.77
SGCE-204ENST00000428696 ABCA3Q99758 1704 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 SLIT3O75094 1523 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
SGCE-204ENST00000428696 AXIN2Q9Y2T1 843 aa19.85■□□□□ 0.77
SGCE-204ENST00000428696 MAP3K19Q56UN5 1328 aa19.83■□□□□ 0.76
SGCE-204ENST00000428696 A0A0G2JS52 829 aa19.83■□□□□ 0.76
SGCE-204ENST00000428696 MYT1Q01538 1121 aa19.83■□□□□ 0.76
SGCE-204ENST00000428696 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms