RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
KDM3A-204ENST00000427678 LRP6O75581 1613 aa20.8■□□□□ 0.92
KDM3A-204ENST00000427678 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
KDM3A-204ENST00000427678 NGLY1Q96IV0 654 aa20.8■□□□□ 0.92
KDM3A-204ENST00000427678 C8orf37Q96NL8 207 aa20.8■□□□□ 0.92
KDM3A-204ENST00000427678 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
KDM3A-204ENST00000427678 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.92
KDM3A-204ENST00000427678 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
KDM3A-204ENST00000427678 NUTM2GQ5VZR2 741 aa20.77■□□□□ 0.92
KDM3A-204ENST00000427678 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
KDM3A-204ENST00000427678 USP6P35125 1406 aa20.77■□□□□ 0.91
KDM3A-204ENST00000427678 KTN1Q86UP2 1357 aaKnown RBP20.76■□□□□ 0.91
KDM3A-204ENST00000427678 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
KDM3A-204ENST00000427678 CPSF1Q10570 1443 aaKnown RBP20.76■□□□□ 0.91
KDM3A-204ENST00000427678 TTC21BQ7Z4L5 1316 aa20.75■□□□□ 0.91
KDM3A-204ENST00000427678 NLRP6P59044 892 aa20.74■□□□□ 0.91
KDM3A-204ENST00000427678 COL22A1Q8NFW1 1626 aaPredicted RBP20.74■□□□□ 0.91
KDM3A-204ENST00000427678 AFF2P51816 1311 aa20.73■□□□□ 0.91
KDM3A-204ENST00000427678 TTC21AQ8NDW8 1320 aa20.73■□□□□ 0.91
KDM3A-204ENST00000427678 SSH2Q76I76 1423 aa20.72■□□□□ 0.91
KDM3A-204ENST00000427678 FNBP4Q8N3X1 1017 aaPredicted RBP20.72■□□□□ 0.91
KDM3A-204ENST00000427678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
KDM3A-204ENST00000427678 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
KDM3A-204ENST00000427678 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
KDM3A-204ENST00000427678 POTEAQ6S8J7 498 aa20.7■□□□□ 0.9
KDM3A-204ENST00000427678 USP21Q9UK80 565 aa20.7■□□□□ 0.9
KDM3A-204ENST00000427678 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
KDM3A-204ENST00000427678 GCP02774 474 aa20.68■□□□□ 0.9
KDM3A-204ENST00000427678 QTRT2Q9H974 415 aaKnown RBP20.68■□□□□ 0.9
KDM3A-204ENST00000427678 A0A1W2PP64 1363 aa20.68■□□□□ 0.9
KDM3A-204ENST00000427678 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
KDM3A-204ENST00000427678 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
KDM3A-204ENST00000427678 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
KDM3A-204ENST00000427678 USP19O94966 1318 aa20.66■□□□□ 0.9
KDM3A-204ENST00000427678 ANKRD36BQ8N2N9 1353 aa20.66■□□□□ 0.9
KDM3A-204ENST00000427678 ALS2Q96Q42 1657 aa20.66■□□□□ 0.9
KDM3A-204ENST00000427678 EDC4Q6P2E9 1401 aaKnown RBP20.65■□□□□ 0.9
KDM3A-204ENST00000427678 ILDR2Q71H61 639 aa20.65■□□□□ 0.9
KDM3A-204ENST00000427678 C11orf95C9JLR9 678 aaPredicted RBP20.64■□□□□ 0.89
KDM3A-204ENST00000427678 RXRBP28702 533 aa20.64■□□□□ 0.89
KDM3A-204ENST00000427678 NME9Q86XW9 330 aa20.64■□□□□ 0.89
KDM3A-204ENST00000427678 UNC5CLQ8IV45 518 aa20.64■□□□□ 0.89
KDM3A-204ENST00000427678 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.89
KDM3A-204ENST00000427678 TRPC5Q9UL62 973 aaPredicted RBP20.64■□□□□ 0.89
KDM3A-204ENST00000427678 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
KDM3A-204ENST00000427678 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
KDM3A-204ENST00000427678 BTG4Q9NY30 223 aa20.61■□□□□ 0.89
KDM3A-204ENST00000427678 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
KDM3A-204ENST00000427678 USP31Q70CQ4 1352 aa20.6■□□□□ 0.89
KDM3A-204ENST00000427678 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
KDM3A-204ENST00000427678 CHRNA2Q15822 529 aa20.6■□□□□ 0.89
KDM3A-204ENST00000427678 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
KDM3A-204ENST00000427678 BCL9LQ86UU0 1499 aa20.6■□□□□ 0.89
KDM3A-204ENST00000427678 CPDO75976 1380 aa20.59■□□□□ 0.89
KDM3A-204ENST00000427678 SLIT2O94813 1529 aa20.58■□□□□ 0.89
KDM3A-204ENST00000427678 SOX12O15370 315 aa20.58■□□□□ 0.89
KDM3A-204ENST00000427678 COG3Q96JB2 828 aa20.58■□□□□ 0.89
KDM3A-204ENST00000427678 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
KDM3A-204ENST00000427678 FYB1O15117 783 aa20.57■□□□□ 0.88
KDM3A-204ENST00000427678 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
KDM3A-204ENST00000427678 ZBTB7CA1YPR0 619 aa20.56■□□□□ 0.88
KDM3A-204ENST00000427678 EVA1CP58658 441 aa20.56■□□□□ 0.88
KDM3A-204ENST00000427678 GJD4Q96KN9 370 aaPredicted RBP20.56■□□□□ 0.88
KDM3A-204ENST00000427678 PANK3Q9H999 370 aa20.56■□□□□ 0.88
KDM3A-204ENST00000427678 VPS72Q15906 364 aa20.55■□□□□ 0.88
KDM3A-204ENST00000427678 ARHGEF25Q86VW2 580 aa20.55■□□□□ 0.88
KDM3A-204ENST00000427678 CCDC9Q9Y3X0 531 aaKnown RBP20.55■□□□□ 0.88
KDM3A-204ENST00000427678 MON2Q7Z3U7 1717 aa20.54■□□□□ 0.88
KDM3A-204ENST00000427678 GGNBP2Q9H3C7 697 aa20.53■□□□□ 0.88
KDM3A-204ENST00000427678 ATRNO75882 1429 aa20.53■□□□□ 0.88
KDM3A-204ENST00000427678 PIK3C2AO00443 1686 aa20.52■□□□□ 0.88
KDM3A-204ENST00000427678 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
KDM3A-204ENST00000427678 SLIT3O75094 1523 aa20.52■□□□□ 0.87
KDM3A-204ENST00000427678 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.87
KDM3A-204ENST00000427678 AATKQ6ZMQ8 1374 aa20.51■□□□□ 0.87
KDM3A-204ENST00000427678 NSD3Q9BZ95 1437 aa20.51■□□□□ 0.87
KDM3A-204ENST00000427678 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
KDM3A-204ENST00000427678 ABCA3Q99758 1704 aa20.5■□□□□ 0.87
KDM3A-204ENST00000427678 MARF1Q9Y4F3 1742 aaKnown RBP20.5■□□□□ 0.87
KDM3A-204ENST00000427678 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
KDM3A-204ENST00000427678 CRYBG1Q9Y4K1 1723 aa20.49■□□□□ 0.87
KDM3A-204ENST00000427678 WASHC2AQ641Q2 1341 aa20.49■□□□□ 0.87
KDM3A-204ENST00000427678 CCDC7Q96M83 1385 aa20.48■□□□□ 0.87
KDM3A-204ENST00000427678 OVOS2A0A0J9YW53 1432 aa20.48■□□□□ 0.87
KDM3A-204ENST00000427678 OVOS2Q6IE36 1432 aa20.48■□□□□ 0.87
KDM3A-204ENST00000427678 COL14A1Q05707 1796 aaKnown RBP20.48■□□□□ 0.87
KDM3A-204ENST00000427678 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
KDM3A-204ENST00000427678 AXIN2Q9Y2T1 843 aa20.47■□□□□ 0.87
KDM3A-204ENST00000427678 SPATA31A5Q5VU36 1347 aa20.46■□□□□ 0.87
KDM3A-204ENST00000427678 SPATA31A7Q8IWB4 1347 aa20.46■□□□□ 0.87
KDM3A-204ENST00000427678 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
KDM3A-204ENST00000427678 LARP1Q6PKG0 1096 aaKnown RBP20.45■□□□□ 0.86
KDM3A-204ENST00000427678 SOCS7O14512 581 aa20.44■□□□□ 0.86
KDM3A-204ENST00000427678 ONECUT3O60422 494 aaPredicted RBP20.44■□□□□ 0.86
KDM3A-204ENST00000427678 CAMTA1Q9Y6Y1 1673 aa20.44■□□□□ 0.86
KDM3A-204ENST00000427678 MYOM1P52179 1685 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 CSB-PGBD3P0DP91 1061 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 FBLN1P23142 703 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 AMPHP49418 695 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 NWD2Q9ULI1 1742 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms