RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 COL3A1P02461 1466 aaPredicted RBP30.46■■■□□ 2.47
RUNDC3A-202ENST00000426726 SMG6Q86US8 1419 aaKnown RBP30.45■■■□□ 2.47
RUNDC3A-202ENST00000426726 COG3Q96JB2 828 aa30.45■■■□□ 2.46
RUNDC3A-202ENST00000426726 AATKQ6ZMQ8 1374 aa30.44■■■□□ 2.46
RUNDC3A-202ENST00000426726 TTC21AQ8NDW8 1320 aa30.44■■■□□ 2.46
RUNDC3A-202ENST00000426726 NGDNQ8NEJ9 315 aaKnown RBP30.44■■■□□ 2.46
RUNDC3A-202ENST00000426726 STRCQ7RTU9 1775 aa30.43■■■□□ 2.46
RUNDC3A-202ENST00000426726 PMFBP1Q8TBY8 1022 aa30.43■■■□□ 2.46
RUNDC3A-202ENST00000426726 OVOS2A0A0J9YW53 1432 aa30.42■■■□□ 2.46
RUNDC3A-202ENST00000426726 OVOS2Q6IE36 1432 aa30.42■■■□□ 2.46
RUNDC3A-202ENST00000426726 STRCP1A6NGW2 1772 aa30.42■■■□□ 2.46
RUNDC3A-202ENST00000426726 MAP2P11137 1827 aaKnown RBP30.41■■■□□ 2.46
RUNDC3A-202ENST00000426726 C14orf37Q86TY3 774 aa30.41■■■□□ 2.46
RUNDC3A-202ENST00000426726 PROSER2Q86WR7 435 aaPredicted RBP30.41■■■□□ 2.46
RUNDC3A-202ENST00000426726 PNPLA6Q8IY17 1366 aa30.41■■■□□ 2.46
RUNDC3A-202ENST00000426726 PDE3BQ13370 1112 aa30.4■■■□□ 2.46
RUNDC3A-202ENST00000426726 RBM33Q96EV2 1170 aaKnown RBP30.4■■■□□ 2.46
RUNDC3A-202ENST00000426726 NCOA3Q9Y6Q9 1424 aa30.39■■■□□ 2.46
RUNDC3A-202ENST00000426726 SENP3-EIF4A1A0A087X0R7 540 aa30.38■■■□□ 2.45
RUNDC3A-202ENST00000426726 NUDCQ9Y266 331 aa30.38■■■□□ 2.45
RUNDC3A-202ENST00000426726 CDK12Q9NYV4 1490 aaPredicted RBP30.37■■■□□ 2.45
RUNDC3A-202ENST00000426726 ZRANB1Q9UGI0 708 aa30.36■■■□□ 2.45
RUNDC3A-202ENST00000426726 POLKQ9UBT6 870 aa30.35■■■□□ 2.45
RUNDC3A-202ENST00000426726 NGEFQ8N5V2 710 aa30.35■■■□□ 2.45
RUNDC3A-202ENST00000426726 PHF8Q9UPP1 1060 aa30.35■■■□□ 2.45
RUNDC3A-202ENST00000426726 PIK3C2AO00443 1686 aa30.35■■■□□ 2.45
RUNDC3A-202ENST00000426726 USP54Q70EL1 1684 aa30.35■■■□□ 2.45
RUNDC3A-202ENST00000426726 SALL2Q9Y467 1007 aaPredicted RBP30.34■■■□□ 2.45
RUNDC3A-202ENST00000426726 CCDC146Q8IYE0 955 aa30.33■■■□□ 2.45
RUNDC3A-202ENST00000426726 DCCP43146 1447 aa30.33■■■□□ 2.45
RUNDC3A-202ENST00000426726 USP31Q70CQ4 1352 aa30.32■■■□□ 2.45
RUNDC3A-202ENST00000426726 LRRC7Q96NW7 1537 aa30.31■■■□□ 2.44
RUNDC3A-202ENST00000426726 MYT1Q01538 1121 aa30.31■■■□□ 2.44
RUNDC3A-202ENST00000426726 C19orf44Q9H6X5 657 aa30.31■■■□□ 2.44
RUNDC3A-202ENST00000426726 TMEM94Q12767 1356 aa30.3■■■□□ 2.44
RUNDC3A-202ENST00000426726 KIF1AQ12756 1690 aa30.29■■■□□ 2.44
RUNDC3A-202ENST00000426726 IQSEC2Q5JU85 1478 aa30.29■■■□□ 2.44
RUNDC3A-202ENST00000426726 DIAPH1O60610 1272 aaKnown RBP30.29■■■□□ 2.44
RUNDC3A-202ENST00000426726 RUNDC1Q96C34 613 aa30.29■■■□□ 2.44
RUNDC3A-202ENST00000426726 NEFLP07196 543 aa30.29■■■□□ 2.44
RUNDC3A-202ENST00000426726 U2AF1L5P0DN76 240 aaPredicted RBP30.28■■■□□ 2.44
RUNDC3A-202ENST00000426726 U2AF1Q01081 240 aaKnown RBP eCLIP30.28■■■□□ 2.44
RUNDC3A-202ENST00000426726 APAF1O14727 1248 aa30.27■■■□□ 2.44
RUNDC3A-202ENST00000426726 ZNF521Q96K83 1311 aa30.26■■■□□ 2.44
RUNDC3A-202ENST00000426726 ESCO1Q5FWF5 840 aa30.26■■■□□ 2.43
RUNDC3A-202ENST00000426726 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.43
RUNDC3A-202ENST00000426726 SUPT16HQ9Y5B9 1047 aaKnown RBP30.25■■■□□ 2.43
RUNDC3A-202ENST00000426726 PPM1GO15355 546 aaPredicted RBP30.24■■■□□ 2.43
RUNDC3A-202ENST00000426726 FBLN1P23142 703 aa30.24■■■□□ 2.43
RUNDC3A-202ENST00000426726 MARF1Q9Y4F3 1742 aaKnown RBP30.24■■■□□ 2.43
RUNDC3A-202ENST00000426726 C1orf167Q5SNV9 1468 aa30.24■■■□□ 2.43
RUNDC3A-202ENST00000426726 U2SURPO15042 1029 aaKnown RBP30.23■■■□□ 2.43
RUNDC3A-202ENST00000426726 RRS1Q15050 365 aaKnown RBP30.2■■■□□ 2.43
RUNDC3A-202ENST00000426726 XIRP1Q702N8 1843 aaKnown RBP30.2■■■□□ 2.42
RUNDC3A-202ENST00000426726 NCBP3Q53F19 620 aaKnown RBP30.2■■■□□ 2.42
RUNDC3A-202ENST00000426726 ATF3P18847 181 aa30.19■■■□□ 2.42
RUNDC3A-202ENST00000426726 PNNQ9H307 717 aaKnown RBP30.19■■■□□ 2.42
RUNDC3A-202ENST00000426726 MST1RQ04912 1400 aa30.19■■■□□ 2.42
RUNDC3A-202ENST00000426726 PEAK1Q9H792 1746 aa30.17■■■□□ 2.42
RUNDC3A-202ENST00000426726 MSH6P52701 1360 aa30.17■■■□□ 2.42
RUNDC3A-202ENST00000426726 GOLGA2Q08379 1002 aa30.17■■■□□ 2.42
RUNDC3A-202ENST00000426726 TCP11L2Q8N4U5 519 aa30.17■■■□□ 2.42
RUNDC3A-202ENST00000426726 CDCA7LQ96GN5 454 aa30.17■■■□□ 2.42
RUNDC3A-202ENST00000426726 NLRP6P59044 892 aa30.16■■■□□ 2.42
RUNDC3A-202ENST00000426726 PSME1Q06323 249 aa30.16■■■□□ 2.42
RUNDC3A-202ENST00000426726 ORAI2Q96SN7 254 aa30.16■■■□□ 2.42
RUNDC3A-202ENST00000426726 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
RUNDC3A-202ENST00000426726 FKBP8Q14318 412 aa30.15■■■□□ 2.42
RUNDC3A-202ENST00000426726 CADPS2Q86UW7 1296 aa30.15■■■□□ 2.42
RUNDC3A-202ENST00000426726 ABTB2Q8N961 1025 aa30.15■■■□□ 2.42
RUNDC3A-202ENST00000426726 IL13P35225 146 aa30.14■■■□□ 2.42
RUNDC3A-202ENST00000426726 PLEKHF1Q96S99 279 aa30.13■■■□□ 2.41
RUNDC3A-202ENST00000426726 TRPM3Q9HCF6 1732 aaPredicted RBP30.13■■■□□ 2.41
RUNDC3A-202ENST00000426726 FCHSD2O94868 740 aa30.13■■■□□ 2.41
RUNDC3A-202ENST00000426726 MAPK8IP3Q9UPT6 1336 aa30.12■■■□□ 2.41
RUNDC3A-202ENST00000426726 CCDC27Q2M243 656 aa30.12■■■□□ 2.41
RUNDC3A-202ENST00000426726 SBNO1A3KN83 1393 aa30.11■■■□□ 2.41
RUNDC3A-202ENST00000426726 KIF24Q5T7B8 1368 aa30.11■■■□□ 2.41
RUNDC3A-202ENST00000426726 PHF23Q9BUL5 403 aaPredicted RBP30.1■■■□□ 2.41
RUNDC3A-202ENST00000426726 FLT4P35916 1363 aa30.1■■■□□ 2.41
RUNDC3A-202ENST00000426726 DMRT2Q9Y5R5 561 aa30.1■■■□□ 2.41
RUNDC3A-202ENST00000426726 WWC1Q8IX03 1113 aa30.09■■■□□ 2.41
RUNDC3A-202ENST00000426726 MAP3K19Q56UN5 1328 aa30.09■■■□□ 2.41
RUNDC3A-202ENST00000426726 ZNF335Q9H4Z2 1342 aaPredicted RBP30.08■■■□□ 2.41
RUNDC3A-202ENST00000426726 RNF123Q5XPI4 1314 aa30.08■■■□□ 2.41
RUNDC3A-202ENST00000426726 FOXO3O43524 673 aa30.07■■■□□ 2.4
RUNDC3A-202ENST00000426726 SLFN5Q08AF3 891 aa30.07■■■□□ 2.4
RUNDC3A-202ENST00000426726 RSPH6AQ9H0K4 717 aa30.07■■■□□ 2.4
RUNDC3A-202ENST00000426726 RGPD1P0DJD0 1748 aa30.06■■■□□ 2.4
RUNDC3A-202ENST00000426726 E9PSI1 815 aa30.06■■■□□ 2.4
RUNDC3A-202ENST00000426726 SOX12O15370 315 aa30.06■■■□□ 2.4
RUNDC3A-202ENST00000426726 DUSP27Q5VZP5 1158 aa30.06■■■□□ 2.4
RUNDC3A-202ENST00000426726 RRP7AQ9Y3A4 280 aaKnown RBP30.05■■■□□ 2.4
RUNDC3A-202ENST00000426726 NEFMP07197 916 aa30.05■■■□□ 2.4
RUNDC3A-202ENST00000426726 NUTM2GQ5VZR2 741 aa30.05■■■□□ 2.4
RUNDC3A-202ENST00000426726 NFAT5O94916 1531 aa30.04■■■□□ 2.4
RUNDC3A-202ENST00000426726 TRMT2AQ8IZ69 625 aaKnown RBP30.04■■■□□ 2.4
RUNDC3A-202ENST00000426726 RCAN3Q9UKA8 241 aa30.04■■■□□ 2.4
RUNDC3A-202ENST00000426726 EIF4A2Q14240 407 aaKnown RBP30.03■■■□□ 2.4
RUNDC3A-202ENST00000426726 NEUROD2Q15784 382 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms