RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NME9Q86XW9 330 aa20.26■□□□□ 0.83
GINS3-203ENST00000426538 COG3Q96JB2 828 aa20.26■□□□□ 0.83
GINS3-203ENST00000426538 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
GINS3-203ENST00000426538 MSH6P52701 1360 aa20.24■□□□□ 0.83
GINS3-203ENST00000426538 MTHFSP49914 203 aa20.24■□□□□ 0.83
GINS3-203ENST00000426538 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.83
GINS3-203ENST00000426538 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
GINS3-203ENST00000426538 TTC21AQ8NDW8 1320 aa20.23■□□□□ 0.83
GINS3-203ENST00000426538 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
GINS3-203ENST00000426538 DCCP43146 1447 aa20.22■□□□□ 0.83
GINS3-203ENST00000426538 PSME1Q06323 249 aa20.22■□□□□ 0.83
GINS3-203ENST00000426538 ORAI2Q96SN7 254 aa20.21■□□□□ 0.83
GINS3-203ENST00000426538 SSH2Q76I76 1423 aa20.2■□□□□ 0.82
GINS3-203ENST00000426538 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
GINS3-203ENST00000426538 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
GINS3-203ENST00000426538 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
GINS3-203ENST00000426538 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
GINS3-203ENST00000426538 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
GINS3-203ENST00000426538 C1orf167Q5SNV9 1468 aa20.18■□□□□ 0.82
GINS3-203ENST00000426538 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
GINS3-203ENST00000426538 FOXO3O43524 673 aa20.16■□□□□ 0.82
GINS3-203ENST00000426538 ABTB2Q8N961 1025 aa20.16■□□□□ 0.82
GINS3-203ENST00000426538 MST1RQ04912 1400 aa20.15■□□□□ 0.82
GINS3-203ENST00000426538 INSRP06213 1382 aa20.14■□□□□ 0.82
GINS3-203ENST00000426538 AATKQ6ZMQ8 1374 aa20.14■□□□□ 0.82
GINS3-203ENST00000426538 NLRP6P59044 892 aa20.14■□□□□ 0.81
GINS3-203ENST00000426538 POLKQ9UBT6 870 aa20.14■□□□□ 0.81
GINS3-203ENST00000426538 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
GINS3-203ENST00000426538 FBLN1P23142 703 aa20.13■□□□□ 0.81
GINS3-203ENST00000426538 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
GINS3-203ENST00000426538 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
GINS3-203ENST00000426538 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
GINS3-203ENST00000426538 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
GINS3-203ENST00000426538 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
GINS3-203ENST00000426538 ZBED9Q6R2W3 1325 aa20.11■□□□□ 0.81
GINS3-203ENST00000426538 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
GINS3-203ENST00000426538 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
GINS3-203ENST00000426538 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
GINS3-203ENST00000426538 KRT28Q7Z3Y7 464 aa20.1■□□□□ 0.81
GINS3-203ENST00000426538 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
GINS3-203ENST00000426538 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
GINS3-203ENST00000426538 SLAIN2Q9P270 581 aa20.09■□□□□ 0.81
GINS3-203ENST00000426538 EMILIN1Q9Y6C2 1016 aa20.09■□□□□ 0.81
GINS3-203ENST00000426538 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
GINS3-203ENST00000426538 XPCQ01831 940 aaPredicted RBP20.08■□□□□ 0.81
GINS3-203ENST00000426538 SOX12O15370 315 aa20.07■□□□□ 0.8
GINS3-203ENST00000426538 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
GINS3-203ENST00000426538 PIK3C2AO00443 1686 aa20.07■□□□□ 0.8
GINS3-203ENST00000426538 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
GINS3-203ENST00000426538 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
GINS3-203ENST00000426538 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
GINS3-203ENST00000426538 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
GINS3-203ENST00000426538 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
GINS3-203ENST00000426538 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
GINS3-203ENST00000426538 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
GINS3-203ENST00000426538 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
GINS3-203ENST00000426538 SHPRHQ149N8 1683 aa20.04■□□□□ 0.8
GINS3-203ENST00000426538 BRINP3Q76B58 766 aa20.03■□□□□ 0.8
GINS3-203ENST00000426538 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
GINS3-203ENST00000426538 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
GINS3-203ENST00000426538 CDK12Q9NYV4 1490 aaPredicted RBP20.02■□□□□ 0.8
GINS3-203ENST00000426538 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.79
GINS3-203ENST00000426538 KCNH5Q8NCM2 988 aa20.02■□□□□ 0.79
GINS3-203ENST00000426538 DDX17Q92841 729 aaKnown RBP20.02■□□□□ 0.79
GINS3-203ENST00000426538 AMPHP49418 695 aa20■□□□□ 0.79
GINS3-203ENST00000426538 PNNQ9H307 717 aaKnown RBP20■□□□□ 0.79
GINS3-203ENST00000426538 USP54Q70EL1 1684 aa20■□□□□ 0.79
GINS3-203ENST00000426538 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
GINS3-203ENST00000426538 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
GINS3-203ENST00000426538 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
GINS3-203ENST00000426538 APAF1O14727 1248 aa19.98■□□□□ 0.79
GINS3-203ENST00000426538 IL13P35225 146 aa19.98■□□□□ 0.79
GINS3-203ENST00000426538 TRPM3Q9HCF6 1732 aaPredicted RBP19.97■□□□□ 0.79
GINS3-203ENST00000426538 LTBP4Q8N2S1 1624 aa19.97■□□□□ 0.79
GINS3-203ENST00000426538 FLT4P35916 1363 aa19.97■□□□□ 0.79
GINS3-203ENST00000426538 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
GINS3-203ENST00000426538 GCP02774 474 aa19.96■□□□□ 0.79
GINS3-203ENST00000426538 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
GINS3-203ENST00000426538 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
GINS3-203ENST00000426538 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
GINS3-203ENST00000426538 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
GINS3-203ENST00000426538 FCHSD2O94868 740 aa19.95■□□□□ 0.78
GINS3-203ENST00000426538 NEFMP07197 916 aa19.94■□□□□ 0.78
GINS3-203ENST00000426538 PDE3BQ13370 1112 aa19.94■□□□□ 0.78
GINS3-203ENST00000426538 EIF4A2Q14240 407 aaKnown RBP19.93■□□□□ 0.78
GINS3-203ENST00000426538 SPATA31A3Q5VYP0 1347 aa19.93■□□□□ 0.78
GINS3-203ENST00000426538 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
GINS3-203ENST00000426538 PXDNQ92626 1479 aa19.93■□□□□ 0.78
GINS3-203ENST00000426538 TCP11L2Q8N4U5 519 aa19.93■□□□□ 0.78
GINS3-203ENST00000426538 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
GINS3-203ENST00000426538 USP19O94966 1318 aa19.92■□□□□ 0.78
GINS3-203ENST00000426538 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
GINS3-203ENST00000426538 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
GINS3-203ENST00000426538 HOXC9P31274 260 aa19.91■□□□□ 0.78
GINS3-203ENST00000426538 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
GINS3-203ENST00000426538 PEAK1Q9H792 1746 aa19.91■□□□□ 0.78
GINS3-203ENST00000426538 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
GINS3-203ENST00000426538 HMOX1P09601 288 aa19.9■□□□□ 0.78
GINS3-203ENST00000426538 PLEKHF1Q96S99 279 aa19.9■□□□□ 0.78
GINS3-203ENST00000426538 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms