RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
HMGB1P32-201ENST00000425971 UCN2Q96RP3 112 aa11.53□□□□□ -0.56
HMGB1P32-201ENST00000425971 COPS2P61201 443 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 NR1H3Q13133 447 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 CFAP70Q5T0N1 1121 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 SPSB2Q99619 263 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
HMGB1P32-201ENST00000425971 FBXO45P0C2W1 286 aa11.51□□□□□ -0.57
HMGB1P32-201ENST00000425971 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P32-201ENST00000425971 PPP1R12CQ9BZL4 782 aa11.51□□□□□ -0.57
HMGB1P32-201ENST00000425971 CCNYL3P0C7X3 344 aa11.5□□□□□ -0.57
HMGB1P32-201ENST00000425971 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
HMGB1P32-201ENST00000425971 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
HMGB1P32-201ENST00000425971 TLL1O43897 1013 aa11.49□□□□□ -0.57
HMGB1P32-201ENST00000425971 TRAIPQ9BWF2 469 aa11.49□□□□□ -0.57
HMGB1P32-201ENST00000425971 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
HMGB1P32-201ENST00000425971 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 ADH1BP00325 375 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 SRPK2P78362 688 aaKnown RBP11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 PBXIP1Q96AQ6 731 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 CC2D2AQ9P2K1 1620 aa11.48□□□□□ -0.57
HMGB1P32-201ENST00000425971 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 ZPR1O75312 459 aa11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 CTHP32929 405 aa11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 MTRQ99707 1265 aa11.47□□□□□ -0.57
HMGB1P32-201ENST00000425971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.44□□□□□ -0.58
HMGB1P32-201ENST00000425971 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
HMGB1P32-201ENST00000425971 PODXL2Q9NZ53 605 aa11.44□□□□□ -0.58
HMGB1P32-201ENST00000425971 RFX1P22670 979 aa11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 TFIP11Q9UBB9 837 aaKnown RBP11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
HMGB1P32-201ENST00000425971 NACADO15069 1562 aa11.42□□□□□ -0.58
HMGB1P32-201ENST00000425971 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
HMGB1P32-201ENST00000425971 IL21Q9HBE4 155 aa11.42□□□□□ -0.58
HMGB1P32-201ENST00000425971 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
HMGB1P32-201ENST00000425971 PTPN5P54829 565 aa11.41□□□□□ -0.58
HMGB1P32-201ENST00000425971 TBC1D9Q6ZT07 1266 aa11.41□□□□□ -0.58
HMGB1P32-201ENST00000425971 OCSTAMPQ9BR26 566 aa11.41□□□□□ -0.58
HMGB1P32-201ENST00000425971 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
HMGB1P32-201ENST00000425971 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
HMGB1P32-201ENST00000425971 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
HMGB1P32-201ENST00000425971 ATP9BO43861 1147 aa11.39□□□□□ -0.59
HMGB1P32-201ENST00000425971 ZNF516Q92618 1163 aa11.39□□□□□ -0.59
HMGB1P32-201ENST00000425971 PTK2Q05397 1052 aa11.38□□□□□ -0.59
HMGB1P32-201ENST00000425971 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
HMGB1P32-201ENST00000425971 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
HMGB1P32-201ENST00000425971 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
HMGB1P32-201ENST00000425971 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
HMGB1P32-201ENST00000425971 PTCRAQ6ISU1 281 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P32-201ENST00000425971 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
HMGB1P32-201ENST00000425971 SH3BP5LQ7L8J4 393 aa11.35□□□□□ -0.59
HMGB1P32-201ENST00000425971 ATG7O95352 703 aa11.34□□□□□ -0.59
HMGB1P32-201ENST00000425971 PDE4CQ08493 712 aa11.34□□□□□ -0.59
HMGB1P32-201ENST00000425971 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
HMGB1P32-201ENST00000425971 ZNF592Q92610 1267 aa11.34□□□□□ -0.59
HMGB1P32-201ENST00000425971 ZBTB7CA1YPR0 619 aa11.33□□□□□ -0.6
HMGB1P32-201ENST00000425971 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P32-201ENST00000425971 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
HMGB1P32-201ENST00000425971 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
HMGB1P32-201ENST00000425971 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
HMGB1P32-201ENST00000425971 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
HMGB1P32-201ENST00000425971 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
HMGB1P32-201ENST00000425971 S1PR4O95977 384 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 CSB-PGBD3P0DP91 1061 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 KANK4Q5T7N3 995 aaPredicted RBP11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 SH3RF1Q7Z6J0 888 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 PLEKHM2Q8IWE5 1019 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 PCDHB9Q9Y5E1 797 aa11.31□□□□□ -0.6
HMGB1P32-201ENST00000425971 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 SKIP12755 728 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
HMGB1P32-201ENST00000425971 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
HMGB1P32-201ENST00000425971 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
HMGB1P32-201ENST00000425971 CUX2O14529 1486 aa11.29□□□□□ -0.6
HMGB1P32-201ENST00000425971 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
HMGB1P32-201ENST00000425971 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
HMGB1P32-201ENST00000425971 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
HMGB1P32-201ENST00000425971 ELOAQ14241 798 aaKnown RBP11.26□□□□□ -0.61
HMGB1P32-201ENST00000425971 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
HMGB1P32-201ENST00000425971 RNF135Q8IUD6 432 aa11.26□□□□□ -0.61
HMGB1P32-201ENST00000425971 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
HMGB1P32-201ENST00000425971 BAP1Q92560 729 aa11.26□□□□□ -0.61
HMGB1P32-201ENST00000425971 TMEM88BA6NKF7 163 aa11.25□□□□□ -0.61
HMGB1P32-201ENST00000425971 ZNF511Q8NB15 262 aa11.25□□□□□ -0.61
HMGB1P32-201ENST00000425971 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
HMGB1P32-201ENST00000425971 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms