RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 RUNDC1Q96C34 613 aa21.71■■□□□ 1.07
CMTM3-202ENST00000424011 NPHP4O75161 1426 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-202ENST00000424011 CCDC136Q96JN2 1154 aa21.68■■□□□ 1.06
CMTM3-202ENST00000424011 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
CMTM3-202ENST00000424011 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
CMTM3-202ENST00000424011 KIF20BQ96Q89 1820 aa21.67■■□□□ 1.06
CMTM3-202ENST00000424011 CDC42BPGQ6DT37 1551 aa21.67■■□□□ 1.06
CMTM3-202ENST00000424011 KCNA6P17658 529 aa21.67■■□□□ 1.06
CMTM3-202ENST00000424011 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
CMTM3-202ENST00000424011 DUSP27Q5VZP5 1158 aa21.67■■□□□ 1.06
CMTM3-202ENST00000424011 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
CMTM3-202ENST00000424011 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
CMTM3-202ENST00000424011 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-202ENST00000424011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.66■■□□□ 1.06
CMTM3-202ENST00000424011 E9PSI1 815 aa21.65■■□□□ 1.06
CMTM3-202ENST00000424011 EXOC6Q8TAG9 804 aa21.64■■□□□ 1.06
CMTM3-202ENST00000424011 U2AF1L5P0DN76 240 aaPredicted RBP21.63■■□□□ 1.05
CMTM3-202ENST00000424011 U2AF1Q01081 240 aaKnown RBP eCLIP21.63■■□□□ 1.05
CMTM3-202ENST00000424011 TRMT2AQ8IZ69 625 aaKnown RBP21.63■■□□□ 1.05
CMTM3-202ENST00000424011 PNPLA6Q8IY17 1366 aa21.62■■□□□ 1.05
CMTM3-202ENST00000424011 PRR36Q9H6K5 1346 aa21.61■■□□□ 1.05
CMTM3-202ENST00000424011 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
CMTM3-202ENST00000424011 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
CMTM3-202ENST00000424011 COL3A1P02461 1466 aaPredicted RBP21.61■■□□□ 1.05
CMTM3-202ENST00000424011 IQSEC2Q5JU85 1478 aa21.61■■□□□ 1.05
CMTM3-202ENST00000424011 CHD2O14647 1828 aaKnown RBP21.6■■□□□ 1.05
CMTM3-202ENST00000424011 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
CMTM3-202ENST00000424011 WWC1Q8IX03 1113 aa21.6■■□□□ 1.05
CMTM3-202ENST00000424011 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
CMTM3-202ENST00000424011 PLIN1O60240 522 aa21.6■■□□□ 1.05
CMTM3-202ENST00000424011 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
CMTM3-202ENST00000424011 MON2Q7Z3U7 1717 aa21.59■■□□□ 1.05
CMTM3-202ENST00000424011 COG3Q96JB2 828 aa21.58■■□□□ 1.04
CMTM3-202ENST00000424011 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.04
CMTM3-202ENST00000424011 AATKQ6ZMQ8 1374 aa21.58■■□□□ 1.04
CMTM3-202ENST00000424011 HSPA2P54652 639 aa21.57■■□□□ 1.04
CMTM3-202ENST00000424011 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
CMTM3-202ENST00000424011 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
CMTM3-202ENST00000424011 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
CMTM3-202ENST00000424011 AKAP12Q02952 1782 aa21.56■■□□□ 1.04
CMTM3-202ENST00000424011 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-202ENST00000424011 NME9Q86XW9 330 aa21.56■■□□□ 1.04
CMTM3-202ENST00000424011 POLKQ9UBT6 870 aa21.56■■□□□ 1.04
CMTM3-202ENST00000424011 TOPAZ1Q8N9V7 1692 aa21.55■■□□□ 1.04
CMTM3-202ENST00000424011 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-202ENST00000424011 SPINK5Q9NQ38 1064 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-202ENST00000424011 LMTK3Q96Q04 1460 aa21.54■■□□□ 1.04
CMTM3-202ENST00000424011 ACEP12821 1306 aa21.54■■□□□ 1.04
CMTM3-202ENST00000424011 MAPK8IP3Q9UPT6 1336 aa21.52■■□□□ 1.04
CMTM3-202ENST00000424011 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
CMTM3-202ENST00000424011 NEUROD2Q15784 382 aa21.52■■□□□ 1.04
CMTM3-202ENST00000424011 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
CMTM3-202ENST00000424011 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
CMTM3-202ENST00000424011 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
CMTM3-202ENST00000424011 USP6P35125 1406 aa21.51■■□□□ 1.03
CMTM3-202ENST00000424011 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
CMTM3-202ENST00000424011 FCHSD2O94868 740 aa21.5■■□□□ 1.03
CMTM3-202ENST00000424011 CRBNQ96SW2 442 aa21.5■■□□□ 1.03
CMTM3-202ENST00000424011 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
CMTM3-202ENST00000424011 CDK12Q9NYV4 1490 aaPredicted RBP21.5■■□□□ 1.03
CMTM3-202ENST00000424011 ANKARQ7Z5J8 1434 aa21.5■■□□□ 1.03
CMTM3-202ENST00000424011 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
CMTM3-202ENST00000424011 C20orf194Q5TEA3 1177 aa21.49■■□□□ 1.03
CMTM3-202ENST00000424011 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
CMTM3-202ENST00000424011 NEFMP07197 916 aa21.48■■□□□ 1.03
CMTM3-202ENST00000424011 NRKQ7Z2Y5 1582 aa21.48■■□□□ 1.03
CMTM3-202ENST00000424011 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
CMTM3-202ENST00000424011 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
CMTM3-202ENST00000424011 TMPOP42166 694 aaKnown RBP21.46■■□□□ 1.03
CMTM3-202ENST00000424011 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
CMTM3-202ENST00000424011 EMILIN1Q9Y6C2 1016 aa21.45■■□□□ 1.02
CMTM3-202ENST00000424011 ADGRL3Q9HAR2 1447 aa21.45■■□□□ 1.02
CMTM3-202ENST00000424011 SSH2Q76I76 1423 aa21.44■■□□□ 1.02
CMTM3-202ENST00000424011 PROSER2Q86WR7 435 aaPredicted RBP21.44■■□□□ 1.02
CMTM3-202ENST00000424011 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
CMTM3-202ENST00000424011 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
CMTM3-202ENST00000424011 OVOS2A0A0J9YW53 1432 aa21.43■■□□□ 1.02
CMTM3-202ENST00000424011 OVOS2Q6IE36 1432 aa21.43■■□□□ 1.02
CMTM3-202ENST00000424011 FBLN1P23142 703 aa21.43■■□□□ 1.02
CMTM3-202ENST00000424011 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
CMTM3-202ENST00000424011 MAP2P11137 1827 aaKnown RBP21.43■■□□□ 1.02
CMTM3-202ENST00000424011 IL13P35225 146 aa21.42■■□□□ 1.02
CMTM3-202ENST00000424011 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
CMTM3-202ENST00000424011 UBE2Q2Q8WVN8 375 aa21.42■■□□□ 1.02
CMTM3-202ENST00000424011 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
CMTM3-202ENST00000424011 IL16Q14005 1332 aa21.41■■□□□ 1.02
CMTM3-202ENST00000424011 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
CMTM3-202ENST00000424011 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
CMTM3-202ENST00000424011 USP31Q70CQ4 1352 aa21.4■■□□□ 1.02
CMTM3-202ENST00000424011 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
CMTM3-202ENST00000424011 STRCQ7RTU9 1775 aa21.39■■□□□ 1.02
CMTM3-202ENST00000424011 RIPK4P57078 832 aa21.39■■□□□ 1.02
CMTM3-202ENST00000424011 CT47B1P0C2W7 299 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-202ENST00000424011 PRKAR2BP31323 418 aa21.39■■□□□ 1.01
CMTM3-202ENST00000424011 NBR1Q14596 966 aa21.39■■□□□ 1.01
CMTM3-202ENST00000424011 LRRC7Q96NW7 1537 aa21.38■■□□□ 1.01
CMTM3-202ENST00000424011 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
CMTM3-202ENST00000424011 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-202ENST00000424011 BCAR3O75815 825 aa21.37■■□□□ 1.01
CMTM3-202ENST00000424011 C19orf44Q9H6X5 657 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms