RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 KRT28Q7Z3Y7 464 aa26.27■■□□□ 1.8
MCF2L-214ENST00000423251 ABCA3Q99758 1704 aa26.26■■□□□ 1.79
MCF2L-214ENST00000423251 TNS3Q68CZ2 1445 aa26.26■■□□□ 1.79
MCF2L-214ENST00000423251 NGDNQ8NEJ9 315 aaKnown RBP26.26■■□□□ 1.79
MCF2L-214ENST00000423251 TMF1P82094 1093 aa26.25■■□□□ 1.79
MCF2L-214ENST00000423251 ITSN1Q15811 1721 aa26.25■■□□□ 1.79
MCF2L-214ENST00000423251 SLIT2O94813 1529 aa26.24■■□□□ 1.79
MCF2L-214ENST00000423251 HSPA5P11021 654 aaKnown RBP26.24■■□□□ 1.79
MCF2L-214ENST00000423251 GLI3P10071 1580 aa26.24■■□□□ 1.79
MCF2L-214ENST00000423251 CABP1Q9NZU7 370 aa26.23■■□□□ 1.79
MCF2L-214ENST00000423251 PPIP5K1Q6PFW1 1433 aa26.22■■□□□ 1.79
MCF2L-214ENST00000423251 GJD4Q96KN9 370 aaPredicted RBP26.22■■□□□ 1.79
MCF2L-214ENST00000423251 EP400Q96L91 3159 aa26.22■■□□□ 1.79
MCF2L-214ENST00000423251 PLCH1Q4KWH8 1693 aa26.22■■□□□ 1.79
MCF2L-214ENST00000423251 POLR3AO14802 1390 aaPredicted RBP26.21■■□□□ 1.79
MCF2L-214ENST00000423251 ACEP12821 1306 aa26.21■■□□□ 1.79
MCF2L-214ENST00000423251 PLEKHG5O94827 1062 aa26.21■■□□□ 1.79
MCF2L-214ENST00000423251 TOPAZ1Q8N9V7 1692 aa26.21■■□□□ 1.79
MCF2L-214ENST00000423251 CDCA8Q53HL2 280 aa26.2■■□□□ 1.78
MCF2L-214ENST00000423251 UNC5CLQ8IV45 518 aa26.19■■□□□ 1.78
MCF2L-214ENST00000423251 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
MCF2L-214ENST00000423251 HAP1P54257 671 aaPredicted RBP26.18■■□□□ 1.78
MCF2L-214ENST00000423251 CABLES1Q8TDN4 633 aa26.18■■□□□ 1.78
MCF2L-214ENST00000423251 BRWD3Q6RI45 1802 aa26.16■■□□□ 1.78
MCF2L-214ENST00000423251 ZNF692Q9BU19 519 aaPredicted RBP26.16■■□□□ 1.78
MCF2L-214ENST00000423251 TRPM3Q9HCF6 1732 aaPredicted RBP26.16■■□□□ 1.78
MCF2L-214ENST00000423251 NWD2Q9ULI1 1742 aa26.16■■□□□ 1.78
MCF2L-214ENST00000423251 LMOD2Q6P5Q4 547 aa26.15■■□□□ 1.78
MCF2L-214ENST00000423251 ZEB1P37275 1124 aaPredicted RBP26.14■■□□□ 1.78
MCF2L-214ENST00000423251 ARHGEF10O15013 1369 aa26.14■■□□□ 1.78
MCF2L-214ENST00000423251 TMC1Q8TDI8 760 aa26.13■■□□□ 1.77
MCF2L-214ENST00000423251 SLC12A5Q9H2X9 1139 aa26.12■■□□□ 1.77
MCF2L-214ENST00000423251 BRD4O60885 1362 aaPredicted RBP26.11■■□□□ 1.77
MCF2L-214ENST00000423251 NINLQ9Y2I6 1382 aa26.11■■□□□ 1.77
MCF2L-214ENST00000423251 ALS2Q96Q42 1657 aa26.1■■□□□ 1.77
MCF2L-214ENST00000423251 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
MCF2L-214ENST00000423251 NRAPQ86VF7 1730 aa26.08■■□□□ 1.77
MCF2L-214ENST00000423251 CPSF1Q10570 1443 aaKnown RBP26.08■■□□□ 1.77
MCF2L-214ENST00000423251 TERF2IPQ9NYB0 399 aa26.07■■□□□ 1.76
MCF2L-214ENST00000423251 USP6P35125 1406 aa26.06■■□□□ 1.76
MCF2L-214ENST00000423251 VPS72Q15906 364 aa26.06■■□□□ 1.76
MCF2L-214ENST00000423251 HDGFL2Q7Z4V5 671 aaPredicted RBP26.06■■□□□ 1.76
MCF2L-214ENST00000423251 CCDC9Q9Y3X0 531 aaKnown RBP26.05■■□□□ 1.76
MCF2L-214ENST00000423251 CCDC125Q86Z20 511 aa26.04■■□□□ 1.76
MCF2L-214ENST00000423251 CRYBG1Q9Y4K1 1723 aa26.04■■□□□ 1.76
MCF2L-214ENST00000423251 SEPT12Q8IYM1 358 aa26.03■■□□□ 1.76
MCF2L-214ENST00000423251 KTN1Q86UP2 1357 aaKnown RBP26.03■■□□□ 1.76
MCF2L-214ENST00000423251 BLMP54132 1417 aaPredicted RBP26.03■■□□□ 1.76
MCF2L-214ENST00000423251 SSH2Q76I76 1423 aa26.03■■□□□ 1.76
MCF2L-214ENST00000423251 CD163L1Q9NR16 1453 aa26.03■■□□□ 1.76
MCF2L-214ENST00000423251 FAM83GA6ND36 823 aa26.02■■□□□ 1.76
MCF2L-214ENST00000423251 C11orf95C9JLR9 678 aaPredicted RBP26.01■■□□□ 1.75
MCF2L-214ENST00000423251 COL14A1Q05707 1796 aaKnown RBP26.01■■□□□ 1.75
MCF2L-214ENST00000423251 ABTB2Q8N961 1025 aa26.01■■□□□ 1.75
MCF2L-214ENST00000423251 ZRANB1Q9UGI0 708 aa26.01■■□□□ 1.75
MCF2L-214ENST00000423251 AKAP12Q02952 1782 aa26■■□□□ 1.75
MCF2L-214ENST00000423251 SRCAPQ6ZRS2 3230 aa26■■□□□ 1.75
MCF2L-214ENST00000423251 TTC21BQ7Z4L5 1316 aa26■■□□□ 1.75
MCF2L-214ENST00000423251 TTC21AQ8NDW8 1320 aa25.99■■□□□ 1.75
MCF2L-214ENST00000423251 A0A1W2PP64 1363 aa25.98■■□□□ 1.75
MCF2L-214ENST00000423251 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
MCF2L-214ENST00000423251 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
MCF2L-214ENST00000423251 NLRP13Q86W25 1043 aa25.96■■□□□ 1.75
MCF2L-214ENST00000423251 DEFB132Q7Z7B7 95 aa25.95■■□□□ 1.74
MCF2L-214ENST00000423251 BTG4Q9NY30 223 aa25.95■■□□□ 1.74
MCF2L-214ENST00000423251 EDC4Q6P2E9 1401 aaKnown RBP25.95■■□□□ 1.74
MCF2L-214ENST00000423251 A0A0G2JS52 829 aa25.94■■□□□ 1.74
MCF2L-214ENST00000423251 ONECUT3O60422 494 aaPredicted RBP25.94■■□□□ 1.74
MCF2L-214ENST00000423251 MYT1Q01538 1121 aa25.94■■□□□ 1.74
MCF2L-214ENST00000423251 NUTM2GQ5VZR2 741 aa25.94■■□□□ 1.74
MCF2L-214ENST00000423251 KRT27Q7Z3Y8 459 aa25.94■■□□□ 1.74
MCF2L-214ENST00000423251 MON2Q7Z3U7 1717 aa25.94■■□□□ 1.74
MCF2L-214ENST00000423251 PHRF1Q9P1Y6 1649 aaKnown RBP25.93■■□□□ 1.74
MCF2L-214ENST00000423251 NLRP6P59044 892 aa25.93■■□□□ 1.74
MCF2L-214ENST00000423251 KIF7Q2M1P5 1343 aa25.92■■□□□ 1.74
MCF2L-214ENST00000423251 FAM98CQ17RN3 349 aaKnown RBP25.92■■□□□ 1.74
MCF2L-214ENST00000423251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.74
MCF2L-214ENST00000423251 SF3B2Q13435 895 aaKnown RBP25.9■■□□□ 1.74
MCF2L-214ENST00000423251 USP19O94966 1318 aa25.89■■□□□ 1.74
MCF2L-214ENST00000423251 NRKQ7Z2Y5 1582 aa25.89■■□□□ 1.73
MCF2L-214ENST00000423251 MYOM1P52179 1685 aa25.88■■□□□ 1.73
MCF2L-214ENST00000423251 CARD14Q9BXL6 1004 aa25.88■■□□□ 1.73
MCF2L-214ENST00000423251 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
MCF2L-214ENST00000423251 PRDM11Q9NQV5 511 aa25.87■■□□□ 1.73
MCF2L-214ENST00000423251 THSD7AQ9UPZ6 1657 aa25.87■■□□□ 1.73
MCF2L-214ENST00000423251 NME9Q86XW9 330 aa25.86■■□□□ 1.73
MCF2L-214ENST00000423251 CCDC7Q96M83 1385 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 GCP02774 474 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 PANK3Q9H999 370 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 SPATA31A5Q5VU36 1347 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 SPATA31A7Q8IWB4 1347 aa25.85■■□□□ 1.73
MCF2L-214ENST00000423251 KIAA0232Q92628 1395 aa25.84■■□□□ 1.73
MCF2L-214ENST00000423251 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
MCF2L-214ENST00000423251 RGPD1P0DJD0 1748 aa25.83■■□□□ 1.72
MCF2L-214ENST00000423251 KCNH5Q8NCM2 988 aa25.82■■□□□ 1.72
MCF2L-214ENST00000423251 FYB1O15117 783 aa25.81■■□□□ 1.72
MCF2L-214ENST00000423251 CHRNA2Q15822 529 aa25.81■■□□□ 1.72
MCF2L-214ENST00000423251 FAM182BQ5T319 152 aa25.8■■□□□ 1.72
MCF2L-214ENST00000423251 ZC3H6P61129 1189 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms