RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 QRICH2Q9H0J4 1663 aa23.49■■□□□ 1.35
COL18A1-205ENST00000423214 PAK3O75914 559 aaPredicted RBP23.49■■□□□ 1.35
COL18A1-205ENST00000423214 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
COL18A1-205ENST00000423214 A0A0G2JS52 829 aa23.48■■□□□ 1.35
COL18A1-205ENST00000423214 MYT1Q01538 1121 aa23.48■■□□□ 1.35
COL18A1-205ENST00000423214 ZRANB1Q9UGI0 708 aa23.48■■□□□ 1.35
COL18A1-205ENST00000423214 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
COL18A1-205ENST00000423214 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
COL18A1-205ENST00000423214 SF3B2Q13435 895 aaKnown RBP23.45■■□□□ 1.34
COL18A1-205ENST00000423214 BTG4Q9NY30 223 aa23.45■■□□□ 1.34
COL18A1-205ENST00000423214 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
COL18A1-205ENST00000423214 THSD7AQ9UPZ6 1657 aa23.43■■□□□ 1.34
COL18A1-205ENST00000423214 KRT27Q7Z3Y8 459 aa23.42■■□□□ 1.34
COL18A1-205ENST00000423214 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
COL18A1-205ENST00000423214 PRDM11Q9NQV5 511 aa23.41■■□□□ 1.34
COL18A1-205ENST00000423214 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
COL18A1-205ENST00000423214 CDK19Q9BWU1 502 aa23.4■■□□□ 1.34
COL18A1-205ENST00000423214 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
COL18A1-205ENST00000423214 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
COL18A1-205ENST00000423214 POLR3AO14802 1390 aaPredicted RBP23.38■■□□□ 1.33
COL18A1-205ENST00000423214 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
COL18A1-205ENST00000423214 TNS1Q9HBL0 1735 aaKnown RBP23.37■■□□□ 1.33
COL18A1-205ENST00000423214 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
COL18A1-205ENST00000423214 ACEP12821 1306 aa23.35■■□□□ 1.33
COL18A1-205ENST00000423214 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
COL18A1-205ENST00000423214 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
COL18A1-205ENST00000423214 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
COL18A1-205ENST00000423214 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
COL18A1-205ENST00000423214 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
COL18A1-205ENST00000423214 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
COL18A1-205ENST00000423214 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.32
COL18A1-205ENST00000423214 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
COL18A1-205ENST00000423214 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
COL18A1-205ENST00000423214 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
COL18A1-205ENST00000423214 CHRNA2Q15822 529 aa23.31■■□□□ 1.32
COL18A1-205ENST00000423214 BAG6P46379 1132 aa23.3■■□□□ 1.32
COL18A1-205ENST00000423214 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
COL18A1-205ENST00000423214 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
COL18A1-205ENST00000423214 LRP5O75197 1615 aa23.3■■□□□ 1.32
COL18A1-205ENST00000423214 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
COL18A1-205ENST00000423214 STRN4Q9NRL3 753 aa23.29■■□□□ 1.32
COL18A1-205ENST00000423214 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
COL18A1-205ENST00000423214 SPATA31A1Q5TZJ5 1347 aa23.27■■□□□ 1.32
COL18A1-205ENST00000423214 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
COL18A1-205ENST00000423214 SSH2Q76I76 1423 aa23.26■■□□□ 1.31
COL18A1-205ENST00000423214 USP19O94966 1318 aa23.25■■□□□ 1.31
COL18A1-205ENST00000423214 PIK3C2AO00443 1686 aa23.25■■□□□ 1.31
COL18A1-205ENST00000423214 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
COL18A1-205ENST00000423214 FAM182BQ5T319 152 aa23.24■■□□□ 1.31
COL18A1-205ENST00000423214 CABP2Q9NPB3 220 aa23.24■■□□□ 1.31
COL18A1-205ENST00000423214 PARP4Q9UKK3 1724 aaKnown RBP23.24■■□□□ 1.31
COL18A1-205ENST00000423214 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
COL18A1-205ENST00000423214 WNK3Q9BYP7 1800 aa23.23■■□□□ 1.31
COL18A1-205ENST00000423214 CPDO75976 1380 aa23.23■■□□□ 1.31
COL18A1-205ENST00000423214 EVA1CP58658 441 aa23.22■■□□□ 1.31
COL18A1-205ENST00000423214 L3MBTL2Q969R5 705 aa23.22■■□□□ 1.31
COL18A1-205ENST00000423214 USP6P35125 1406 aa23.22■■□□□ 1.31
COL18A1-205ENST00000423214 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
COL18A1-205ENST00000423214 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
COL18A1-205ENST00000423214 SLIT3O75094 1523 aa23.2■■□□□ 1.3
COL18A1-205ENST00000423214 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
COL18A1-205ENST00000423214 ROCK2O75116 1388 aaKnown RBP23.2■■□□□ 1.3
COL18A1-205ENST00000423214 RREB1Q92766 1687 aa23.19■■□□□ 1.3
COL18A1-205ENST00000423214 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
COL18A1-205ENST00000423214 RGPD5Q99666 1765 aa23.18■■□□□ 1.3
COL18A1-205ENST00000423214 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
COL18A1-205ENST00000423214 EN1Q05925 392 aaPredicted RBP23.17■■□□□ 1.3
COL18A1-205ENST00000423214 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
COL18A1-205ENST00000423214 GCP02774 474 aa23.16■■□□□ 1.3
COL18A1-205ENST00000423214 ZBTB7CA1YPR0 619 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 PSDA5PKW4 1024 aaPredicted RBP23.15■■□□□ 1.3
COL18A1-205ENST00000423214 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 LARP1Q6PKG0 1096 aaKnown RBP23.15■■□□□ 1.3
COL18A1-205ENST00000423214 FAM196AQ6ZSG2 479 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 BARGINQ6ZT62 677 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
COL18A1-205ENST00000423214 COL18A1P39060 1754 aa23.14■■□□□ 1.3
COL18A1-205ENST00000423214 SBF2Q86WG5 1849 aa23.13■■□□□ 1.29
COL18A1-205ENST00000423214 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
COL18A1-205ENST00000423214 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
COL18A1-205ENST00000423214 NLRP6P59044 892 aa23.12■■□□□ 1.29
COL18A1-205ENST00000423214 CRB1P82279 1406 aa23.12■■□□□ 1.29
COL18A1-205ENST00000423214 TRIM37O94972 964 aa23.11■■□□□ 1.29
COL18A1-205ENST00000423214 THRAP3Q9Y2W1 955 aaKnown RBP23.1■■□□□ 1.29
COL18A1-205ENST00000423214 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
COL18A1-205ENST00000423214 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
COL18A1-205ENST00000423214 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
COL18A1-205ENST00000423214 PEAK1Q9H792 1746 aa23.08■■□□□ 1.29
COL18A1-205ENST00000423214 EZH2Q15910 746 aaKnown RBP23.08■■□□□ 1.29
COL18A1-205ENST00000423214 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.29
COL18A1-205ENST00000423214 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.28
COL18A1-205ENST00000423214 LTN1O94822 1766 aa23.07■■□□□ 1.28
COL18A1-205ENST00000423214 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
COL18A1-205ENST00000423214 APBA3O96018 575 aa23.06■■□□□ 1.28
COL18A1-205ENST00000423214 R3HDM1Q15032 1099 aaKnown RBP23.06■■□□□ 1.28
COL18A1-205ENST00000423214 OVOS2A0A0G2JMS6 1433 aa23.05■■□□□ 1.28
COL18A1-205ENST00000423214 OVOS2A0A0J9YW53 1432 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms