RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 FNBP4Q8N3X1 1017 aaPredicted RBP37.35■■■■□ 3.57
CDK9-202ENST00000421939 CABP1Q9NZU7 370 aa37.34■■■■□ 3.57
CDK9-202ENST00000421939 USP21Q9UK80 565 aa37.32■■■■□ 3.56
CDK9-202ENST00000421939 CRYBG1Q9Y4K1 1723 aa37.31■■■■□ 3.56
CDK9-202ENST00000421939 USP47Q96K76 1375 aa37.29■■■■□ 3.56
CDK9-202ENST00000421939 RXRBP28702 533 aa37.28■■■■□ 3.56
CDK9-202ENST00000421939 QTRT2Q9H974 415 aaKnown RBP37.28■■■■□ 3.56
CDK9-202ENST00000421939 USP6P35125 1406 aa37.27■■■■□ 3.56
CDK9-202ENST00000421939 ST20-MTHFSA0A0A6YYL1 179 aa37.27■■■■□ 3.56
CDK9-202ENST00000421939 BRD4O60885 1362 aaPredicted RBP37.27■■■■□ 3.56
CDK9-202ENST00000421939 BCL9LQ86UU0 1499 aa37.26■■■■□ 3.56
CDK9-202ENST00000421939 SLIT2O94813 1529 aa37.26■■■■□ 3.56
CDK9-202ENST00000421939 TESK2Q96S53 571 aa37.24■■■■□ 3.55
CDK9-202ENST00000421939 ATRNO75882 1429 aa37.24■■■■□ 3.55
CDK9-202ENST00000421939 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.23■■■■□ 3.55
CDK9-202ENST00000421939 CDK12Q9NYV4 1490 aaPredicted RBP37.23■■■■□ 3.55
CDK9-202ENST00000421939 PHRF1Q9P1Y6 1649 aaKnown RBP37.23■■■■□ 3.55
CDK9-202ENST00000421939 TRPC5Q9UL62 973 aaPredicted RBP37.23■■■■□ 3.55
CDK9-202ENST00000421939 PLCH1Q4KWH8 1693 aa37.22■■■■□ 3.55
CDK9-202ENST00000421939 AKAP12Q02952 1782 aa37.22■■■■□ 3.55
CDK9-202ENST00000421939 RBM6P78332 1123 aaKnown RBP37.21■■■■□ 3.55
CDK9-202ENST00000421939 NUTM2GQ5VZR2 741 aa37.2■■■■□ 3.55
CDK9-202ENST00000421939 ABTB2Q8N961 1025 aa37.19■■■■□ 3.54
CDK9-202ENST00000421939 NWD2Q9ULI1 1742 aa37.19■■■■□ 3.54
CDK9-202ENST00000421939 SSH2Q76I76 1423 aa37.18■■■■□ 3.54
CDK9-202ENST00000421939 SLC24A1O60721 1099 aa37.17■■■■□ 3.54
CDK9-202ENST00000421939 CPSF1Q10570 1443 aaKnown RBP37.17■■■■□ 3.54
CDK9-202ENST00000421939 UNC5CLQ8IV45 518 aa37.16■■■■□ 3.54
CDK9-202ENST00000421939 PUS7Q96PZ0 661 aaKnown RBP37.15■■■■□ 3.54
CDK9-202ENST00000421939 ZNF692Q9BU19 519 aaPredicted RBP37.15■■■■□ 3.54
CDK9-202ENST00000421939 COL14A1Q05707 1796 aaKnown RBP37.14■■■■□ 3.54
CDK9-202ENST00000421939 NRKQ7Z2Y5 1582 aa37.14■■■■□ 3.54
CDK9-202ENST00000421939 USP19O94966 1318 aa37.13■■■■□ 3.54
CDK9-202ENST00000421939 RGS12O14924 1447 aa37.13■■■■□ 3.53
CDK9-202ENST00000421939 FAM83GA6ND36 823 aa37.13■■■■□ 3.53
CDK9-202ENST00000421939 MON2Q7Z3U7 1717 aa37.13■■■■□ 3.53
CDK9-202ENST00000421939 PIK3C2AO00443 1686 aa37.12■■■■□ 3.53
CDK9-202ENST00000421939 CD163L1Q9NR16 1453 aa37.1■■■■□ 3.53
CDK9-202ENST00000421939 KTN1Q86UP2 1357 aaKnown RBP37.1■■■■□ 3.53
CDK9-202ENST00000421939 NLRP13Q86W25 1043 aa37.1■■■■□ 3.53
CDK9-202ENST00000421939 TMC1Q8TDI8 760 aa37.1■■■■□ 3.53
CDK9-202ENST00000421939 NRAPQ86VF7 1730 aa37.08■■■■□ 3.53
CDK9-202ENST00000421939 KIAA0232Q92628 1395 aa37.08■■■■□ 3.53
CDK9-202ENST00000421939 PRDM11Q9NQV5 511 aa37.08■■■■□ 3.53
CDK9-202ENST00000421939 TTC21BQ7Z4L5 1316 aa37.08■■■■□ 3.53
CDK9-202ENST00000421939 NINLQ9Y2I6 1382 aa37.05■■■■□ 3.52
CDK9-202ENST00000421939 TMF1P82094 1093 aa37.05■■■■□ 3.52
CDK9-202ENST00000421939 GJD4Q96KN9 370 aaPredicted RBP37.05■■■■□ 3.52
CDK9-202ENST00000421939 SLC12A5Q9H2X9 1139 aa37.05■■■■□ 3.52
CDK9-202ENST00000421939 TTC21AQ8NDW8 1320 aa37.05■■■■□ 3.52
CDK9-202ENST00000421939 NLRP6P59044 892 aa37.03■■■■□ 3.52
CDK9-202ENST00000421939 BTG4Q9NY30 223 aa37.03■■■■□ 3.52
CDK9-202ENST00000421939 SLIT3O75094 1523 aa37.03■■■■□ 3.52
CDK9-202ENST00000421939 GLI3P10071 1580 aa37.03■■■■□ 3.52
CDK9-202ENST00000421939 ZC3H6P61129 1189 aaKnown RBP37.02■■■■□ 3.52
CDK9-202ENST00000421939 VPS72Q15906 364 aa37.02■■■■□ 3.52
CDK9-202ENST00000421939 HDGFL2Q7Z4V5 671 aaPredicted RBP37.02■■■■□ 3.52
CDK9-202ENST00000421939 CPDO75976 1380 aa37.01■■■■□ 3.51
CDK9-202ENST00000421939 TERF2IPQ9NYB0 399 aa37■■■■□ 3.51
CDK9-202ENST00000421939 A0A1W2PP64 1363 aa37■■■■□ 3.51
CDK9-202ENST00000421939 GCP02774 474 aa36.99■■■■□ 3.51
CDK9-202ENST00000421939 CHRNA2Q15822 529 aa36.98■■■■□ 3.51
CDK9-202ENST00000421939 EDC4Q6P2E9 1401 aaKnown RBP36.97■■■■□ 3.51
CDK9-202ENST00000421939 CCDC9Q9Y3X0 531 aaKnown RBP36.95■■■■□ 3.51
CDK9-202ENST00000421939 CDCA8Q53HL2 280 aa36.94■■■■□ 3.5
CDK9-202ENST00000421939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.93■■■■□ 3.5
CDK9-202ENST00000421939 LMO7Q8WWI1 1683 aa36.92■■■■□ 3.5
CDK9-202ENST00000421939 USP54Q70EL1 1684 aa36.9■■■■□ 3.5
CDK9-202ENST00000421939 ANKRD36BQ8N2N9 1353 aa36.89■■■■□ 3.5
CDK9-202ENST00000421939 EIF4G2P78344 907 aaKnown RBP eCLIP36.88■■■■□ 3.49
CDK9-202ENST00000421939 USP31Q70CQ4 1352 aa36.88■■■■□ 3.49
CDK9-202ENST00000421939 NME9Q86XW9 330 aa36.87■■■■□ 3.49
CDK9-202ENST00000421939 CAMTA1Q9Y6Y1 1673 aa36.86■■■■□ 3.49
CDK9-202ENST00000421939 NFAT5O94916 1531 aa36.85■■■■□ 3.49
CDK9-202ENST00000421939 KCNH5Q8NCM2 988 aa36.85■■■■□ 3.49
CDK9-202ENST00000421939 SPATA31A5Q5VU36 1347 aa36.84■■■■□ 3.49
CDK9-202ENST00000421939 SPATA31A7Q8IWB4 1347 aa36.84■■■■□ 3.49
CDK9-202ENST00000421939 HSPA5P11021 654 aaKnown RBP36.83■■■■□ 3.49
CDK9-202ENST00000421939 STRN4Q9NRL3 753 aa36.83■■■■□ 3.49
CDK9-202ENST00000421939 ZRANB1Q9UGI0 708 aa36.83■■■■□ 3.49
CDK9-202ENST00000421939 MYOM1P52179 1685 aa36.83■■■■□ 3.49
CDK9-202ENST00000421939 AATKQ6ZMQ8 1374 aa36.82■■■■□ 3.49
CDK9-202ENST00000421939 ZBTB7CA1YPR0 619 aa36.82■■■■□ 3.48
CDK9-202ENST00000421939 SOX12O15370 315 aa36.8■■■■□ 3.48
CDK9-202ENST00000421939 ONECUT3O60422 494 aaPredicted RBP36.79■■■■□ 3.48
CDK9-202ENST00000421939 COL5A2P05997 1499 aaPredicted RBP36.79■■■■□ 3.48
CDK9-202ENST00000421939 OVOS2A0A0J9YW53 1432 aa36.78■■■■□ 3.48
CDK9-202ENST00000421939 OVOS2Q6IE36 1432 aa36.78■■■■□ 3.48
CDK9-202ENST00000421939 EVA1CP58658 441 aa36.78■■■■□ 3.48
CDK9-202ENST00000421939 SEPT12Q8IYM1 358 aa36.78■■■■□ 3.48
CDK9-202ENST00000421939 UPF1Q92900 1129 aaKnown RBP eCLIP36.78■■■■□ 3.48
CDK9-202ENST00000421939 COL18A1P39060 1754 aa36.76■■■■□ 3.48
CDK9-202ENST00000421939 FAM98CQ17RN3 349 aaKnown RBP36.76■■■■□ 3.48
CDK9-202ENST00000421939 ARHGEF25Q86VW2 580 aa36.76■■■■□ 3.48
CDK9-202ENST00000421939 SPATA31A1Q5TZJ5 1347 aa36.76■■■■□ 3.47
CDK9-202ENST00000421939 EP400Q96L91 3159 aa36.75■■■■□ 3.47
CDK9-202ENST00000421939 BRWD3Q6RI45 1802 aa36.75■■■■□ 3.47
CDK9-202ENST00000421939 A0A0G2JS52 829 aa36.72■■■■□ 3.47
CDK9-202ENST00000421939 ABCC6O95255 1503 aa36.72■■■■□ 3.47
CDK9-202ENST00000421939 MYT1Q01538 1121 aa36.72■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms