RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 CDK12Q9NYV4 1490 aaPredicted RBP35.5■■■■□ 3.27
SNAPC3-203ENST00000421710 CABLES1Q8TDN4 633 aa35.5■■■■□ 3.27
SNAPC3-203ENST00000421710 TRPC5Q9UL62 973 aaPredicted RBP35.49■■■■□ 3.27
SNAPC3-203ENST00000421710 RBM6P78332 1123 aaKnown RBP35.48■■■■□ 3.27
SNAPC3-203ENST00000421710 PLEKHG5O94827 1062 aa35.47■■■■□ 3.27
SNAPC3-203ENST00000421710 BRD4O60885 1362 aaPredicted RBP35.47■■■■□ 3.27
SNAPC3-203ENST00000421710 ATAD2Q6PL18 1390 aa35.46■■■■□ 3.27
SNAPC3-203ENST00000421710 CABP1Q9NZU7 370 aa35.45■■■■□ 3.27
SNAPC3-203ENST00000421710 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.45■■■■□ 3.27
SNAPC3-203ENST00000421710 CCER1Q8TC90 406 aaPredicted RBP35.44■■■■□ 3.26
SNAPC3-203ENST00000421710 SLIT2O94813 1529 aa35.43■■■■□ 3.26
SNAPC3-203ENST00000421710 BCL9LQ86UU0 1499 aa35.43■■■■□ 3.26
SNAPC3-203ENST00000421710 ATRNO75882 1429 aa35.43■■■■□ 3.26
SNAPC3-203ENST00000421710 CRYBG1Q9Y4K1 1723 aa35.42■■■■□ 3.26
SNAPC3-203ENST00000421710 SLC24A1O60721 1099 aa35.39■■■■□ 3.26
SNAPC3-203ENST00000421710 NWD2Q9ULI1 1742 aa35.39■■■■□ 3.26
SNAPC3-203ENST00000421710 PLCH1Q4KWH8 1693 aa35.38■■■■□ 3.25
SNAPC3-203ENST00000421710 UNC5CLQ8IV45 518 aa35.38■■■■□ 3.25
SNAPC3-203ENST00000421710 USP6P35125 1406 aa35.37■■■■□ 3.25
SNAPC3-203ENST00000421710 ABTB2Q8N961 1025 aa35.36■■■■□ 3.25
SNAPC3-203ENST00000421710 PHRF1Q9P1Y6 1649 aaKnown RBP35.35■■■■□ 3.25
SNAPC3-203ENST00000421710 ZNF692Q9BU19 519 aaPredicted RBP35.34■■■■□ 3.25
SNAPC3-203ENST00000421710 COL14A1Q05707 1796 aaKnown RBP35.33■■■■□ 3.25
SNAPC3-203ENST00000421710 RGS12O14924 1447 aa35.32■■■■□ 3.25
SNAPC3-203ENST00000421710 AKAP12Q02952 1782 aa35.31■■■■□ 3.24
SNAPC3-203ENST00000421710 ST20-MTHFSA0A0A6YYL1 179 aa35.31■■■■□ 3.24
SNAPC3-203ENST00000421710 PUS7Q96PZ0 661 aaKnown RBP35.31■■■■□ 3.24
SNAPC3-203ENST00000421710 FAM83GA6ND36 823 aa35.3■■■■□ 3.24
SNAPC3-203ENST00000421710 NUTM2GQ5VZR2 741 aa35.3■■■■□ 3.24
SNAPC3-203ENST00000421710 USP47Q96K76 1375 aa35.29■■■■□ 3.24
SNAPC3-203ENST00000421710 NLRP13Q86W25 1043 aa35.29■■■■□ 3.24
SNAPC3-203ENST00000421710 GJD4Q96KN9 370 aaPredicted RBP35.29■■■■□ 3.24
SNAPC3-203ENST00000421710 TESK2Q96S53 571 aa35.27■■■■□ 3.24
SNAPC3-203ENST00000421710 PRDM11Q9NQV5 511 aa35.27■■■■□ 3.24
SNAPC3-203ENST00000421710 SSH2Q76I76 1423 aa35.26■■■■□ 3.24
SNAPC3-203ENST00000421710 USP19O94966 1318 aa35.26■■■■□ 3.23
SNAPC3-203ENST00000421710 CPSF1Q10570 1443 aaKnown RBP35.25■■■■□ 3.23
SNAPC3-203ENST00000421710 VPS72Q15906 364 aa35.24■■■■□ 3.23
SNAPC3-203ENST00000421710 NRKQ7Z2Y5 1582 aa35.24■■■■□ 3.23
SNAPC3-203ENST00000421710 BTG4Q9NY30 223 aa35.23■■■■□ 3.23
SNAPC3-203ENST00000421710 KTN1Q86UP2 1357 aaKnown RBP35.23■■■■□ 3.23
SNAPC3-203ENST00000421710 KIAA0232Q92628 1395 aa35.23■■■■□ 3.23
SNAPC3-203ENST00000421710 NRAPQ86VF7 1730 aa35.23■■■■□ 3.23
SNAPC3-203ENST00000421710 MON2Q7Z3U7 1717 aa35.21■■■■□ 3.23
SNAPC3-203ENST00000421710 TMC1Q8TDI8 760 aa35.21■■■■□ 3.23
SNAPC3-203ENST00000421710 TTC21AQ8NDW8 1320 aa35.21■■■■□ 3.23
SNAPC3-203ENST00000421710 NINLQ9Y2I6 1382 aa35.2■■■■□ 3.23
SNAPC3-203ENST00000421710 GLI3P10071 1580 aa35.2■■■■□ 3.23
SNAPC3-203ENST00000421710 PIK3C2AO00443 1686 aa35.2■■■■□ 3.23
SNAPC3-203ENST00000421710 NLRP6P59044 892 aa35.19■■■■□ 3.22
SNAPC3-203ENST00000421710 TTC21BQ7Z4L5 1316 aa35.19■■■■□ 3.22
SNAPC3-203ENST00000421710 CPDO75976 1380 aa35.18■■■■□ 3.22
SNAPC3-203ENST00000421710 HDGFL2Q7Z4V5 671 aaPredicted RBP35.18■■■■□ 3.22
SNAPC3-203ENST00000421710 CCDC9Q9Y3X0 531 aaKnown RBP35.18■■■■□ 3.22
SNAPC3-203ENST00000421710 ZC3H6P61129 1189 aaKnown RBP35.17■■■■□ 3.22
SNAPC3-203ENST00000421710 TMF1P82094 1093 aa35.17■■■■□ 3.22
SNAPC3-203ENST00000421710 TERF2IPQ9NYB0 399 aa35.16■■■■□ 3.22
SNAPC3-203ENST00000421710 GCP02774 474 aa35.15■■■■□ 3.22
SNAPC3-203ENST00000421710 SLIT3O75094 1523 aa35.14■■■■□ 3.22
SNAPC3-203ENST00000421710 CD163L1Q9NR16 1453 aa35.14■■■■□ 3.22
SNAPC3-203ENST00000421710 SLC12A5Q9H2X9 1139 aa35.13■■■■□ 3.21
SNAPC3-203ENST00000421710 CHRNA2Q15822 529 aa35.11■■■■□ 3.21
SNAPC3-203ENST00000421710 CDCA8Q53HL2 280 aa35.11■■■■□ 3.21
SNAPC3-203ENST00000421710 EDC4Q6P2E9 1401 aaKnown RBP35.08■■■■□ 3.21
SNAPC3-203ENST00000421710 KCNH5Q8NCM2 988 aa35.07■■■■□ 3.2
SNAPC3-203ENST00000421710 UPF1Q92900 1129 aaKnown RBP eCLIP35.07■■■■□ 3.2
SNAPC3-203ENST00000421710 A0A1W2PP64 1363 aa35.07■■■■□ 3.2
SNAPC3-203ENST00000421710 LMO7Q8WWI1 1683 aa35.05■■■■□ 3.2
SNAPC3-203ENST00000421710 ONECUT3O60422 494 aaPredicted RBP35.04■■■■□ 3.2
SNAPC3-203ENST00000421710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.04■■■■□ 3.2
SNAPC3-203ENST00000421710 SPATA31A5Q5VU36 1347 aa35.04■■■■□ 3.2
SNAPC3-203ENST00000421710 SPATA31A7Q8IWB4 1347 aa35.04■■■■□ 3.2
SNAPC3-203ENST00000421710 USP31Q70CQ4 1352 aa35.02■■■■□ 3.2
SNAPC3-203ENST00000421710 USP54Q70EL1 1684 aa35.02■■■■□ 3.2
SNAPC3-203ENST00000421710 SEPT12Q8IYM1 358 aa35.02■■■■□ 3.2
SNAPC3-203ENST00000421710 STRN4Q9NRL3 753 aa35.02■■■■□ 3.2
SNAPC3-203ENST00000421710 EVA1CP58658 441 aa35.01■■■■□ 3.2
SNAPC3-203ENST00000421710 CAMTA1Q9Y6Y1 1673 aa35.01■■■■□ 3.19
SNAPC3-203ENST00000421710 AATKQ6ZMQ8 1374 aa35■■■■□ 3.19
SNAPC3-203ENST00000421710 ANKRD36BQ8N2N9 1353 aa34.99■■■■□ 3.19
SNAPC3-203ENST00000421710 A0A0G2JS52 829 aa34.97■■■■□ 3.19
SNAPC3-203ENST00000421710 ZBTB7CA1YPR0 619 aa34.97■■■■□ 3.19
SNAPC3-203ENST00000421710 MYT1Q01538 1121 aa34.97■■■■□ 3.19
SNAPC3-203ENST00000421710 FAM98CQ17RN3 349 aaKnown RBP34.97■■■■□ 3.19
SNAPC3-203ENST00000421710 EIF4G2P78344 907 aaKnown RBP eCLIP34.96■■■■□ 3.19
SNAPC3-203ENST00000421710 BRWD3Q6RI45 1802 aa34.96■■■■□ 3.19
SNAPC3-203ENST00000421710 SPATA31A1Q5TZJ5 1347 aa34.96■■■■□ 3.19
SNAPC3-203ENST00000421710 NME9Q86XW9 330 aa34.95■■■■□ 3.19
SNAPC3-203ENST00000421710 COL5A2P05997 1499 aaPredicted RBP34.94■■■■□ 3.18
SNAPC3-203ENST00000421710 NFAT5O94916 1531 aa34.94■■■■□ 3.18
SNAPC3-203ENST00000421710 ARHGEF25Q86VW2 580 aa34.92■■■■□ 3.18
SNAPC3-203ENST00000421710 SOX12O15370 315 aa34.91■■■■□ 3.18
SNAPC3-203ENST00000421710 ABCC6O95255 1503 aa34.91■■■■□ 3.18
SNAPC3-203ENST00000421710 KRT27Q7Z3Y8 459 aa34.9■■■■□ 3.18
SNAPC3-203ENST00000421710 COL18A1P39060 1754 aa34.9■■■■□ 3.18
SNAPC3-203ENST00000421710 THSD7AQ9UPZ6 1657 aa34.89■■■■□ 3.18
SNAPC3-203ENST00000421710 ZRANB1Q9UGI0 708 aa34.89■■■■□ 3.18
SNAPC3-203ENST00000421710 LARP1Q6PKG0 1096 aaKnown RBP34.88■■■■□ 3.17
SNAPC3-203ENST00000421710 OVOS2A0A0J9YW53 1432 aa34.88■■■■□ 3.17
SNAPC3-203ENST00000421710 OVOS2Q6IE36 1432 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms