RNA–Protein interactions for RNA: ENST00000420536.1

RPL3-204, Transcript of ribosomal protein L3, humanhuman

TSL 5

Gene RPL3, Length 711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-204ENST00000420536 VPS72Q15906 364 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
RPL3-204ENST00000420536 RGS12O14924 1447 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
RPL3-204ENST00000420536 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
RPL3-204ENST00000420536 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
RPL3-204ENST00000420536 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
RPL3-204ENST00000420536 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
RPL3-204ENST00000420536 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.33
RPL3-204ENST00000420536 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
RPL3-204ENST00000420536 ITSN1Q15811 1721 aa13□□□□□ -0.33
RPL3-204ENST00000420536 TRPM1Q7Z4N2 1603 aa13□□□□□ -0.33
RPL3-204ENST00000420536 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
RPL3-204ENST00000420536 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
RPL3-204ENST00000420536 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
RPL3-204ENST00000420536 CLSPNQ9HAW4 1339 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 A0A0G2JS52 829 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 NLRP6P59044 892 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
RPL3-204ENST00000420536 MYT1Q01538 1121 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
RPL3-204ENST00000420536 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
RPL3-204ENST00000420536 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
RPL3-204ENST00000420536 EVA1CP58658 441 aa12.97□□□□□ -0.33
RPL3-204ENST00000420536 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
RPL3-204ENST00000420536 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
RPL3-204ENST00000420536 ALS2Q96Q42 1657 aa12.96□□□□□ -0.33
RPL3-204ENST00000420536 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
RPL3-204ENST00000420536 GCP02774 474 aa12.96□□□□□ -0.33
RPL3-204ENST00000420536 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
RPL3-204ENST00000420536 USP6P35125 1406 aa12.96□□□□□ -0.34
RPL3-204ENST00000420536 USP19O94966 1318 aa12.95□□□□□ -0.34
RPL3-204ENST00000420536 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
RPL3-204ENST00000420536 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.95□□□□□ -0.34
RPL3-204ENST00000420536 TOPAZ1Q8N9V7 1692 aa12.95□□□□□ -0.34
RPL3-204ENST00000420536 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
RPL3-204ENST00000420536 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
RPL3-204ENST00000420536 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 CPDO75976 1380 aa12.94□□□□□ -0.34
RPL3-204ENST00000420536 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
RPL3-204ENST00000420536 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
RPL3-204ENST00000420536 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
RPL3-204ENST00000420536 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
RPL3-204ENST00000420536 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
RPL3-204ENST00000420536 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
RPL3-204ENST00000420536 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
RPL3-204ENST00000420536 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
RPL3-204ENST00000420536 GLI3P10071 1580 aa12.91□□□□□ -0.34
RPL3-204ENST00000420536 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
RPL3-204ENST00000420536 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
RPL3-204ENST00000420536 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
RPL3-204ENST00000420536 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
RPL3-204ENST00000420536 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
RPL3-204ENST00000420536 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
RPL3-204ENST00000420536 TMF1P82094 1093 aa12.89□□□□□ -0.35
RPL3-204ENST00000420536 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
RPL3-204ENST00000420536 CCER1Q8TC90 406 aaPredicted RBP12.89□□□□□ -0.35
RPL3-204ENST00000420536 SLC12A5Q9H2X9 1139 aa12.89□□□□□ -0.35
RPL3-204ENST00000420536 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
RPL3-204ENST00000420536 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
RPL3-204ENST00000420536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPL3-204ENST00000420536 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
RPL3-204ENST00000420536 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
RPL3-204ENST00000420536 TESK2Q96S53 571 aa12.88□□□□□ -0.35
RPL3-204ENST00000420536 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
RPL3-204ENST00000420536 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
RPL3-204ENST00000420536 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
RPL3-204ENST00000420536 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
RPL3-204ENST00000420536 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
RPL3-204ENST00000420536 USP47Q96K76 1375 aa12.86□□□□□ -0.35
RPL3-204ENST00000420536 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
RPL3-204ENST00000420536 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
RPL3-204ENST00000420536 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
RPL3-204ENST00000420536 SOX12O15370 315 aa12.85□□□□□ -0.35
RPL3-204ENST00000420536 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
RPL3-204ENST00000420536 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
RPL3-204ENST00000420536 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
RPL3-204ENST00000420536 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
RPL3-204ENST00000420536 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
RPL3-204ENST00000420536 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
RPL3-204ENST00000420536 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
RPL3-204ENST00000420536 BAG6P46379 1132 aa12.84□□□□□ -0.35
RPL3-204ENST00000420536 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
RPL3-204ENST00000420536 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
RPL3-204ENST00000420536 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.35
RPL3-204ENST00000420536 SLIT3O75094 1523 aa12.83□□□□□ -0.35
RPL3-204ENST00000420536 NRAPQ86VF7 1730 aa12.83□□□□□ -0.36
RPL3-204ENST00000420536 NME9Q86XW9 330 aa12.83□□□□□ -0.36
RPL3-204ENST00000420536 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
RPL3-204ENST00000420536 CRB1P82279 1406 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms