RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
TGFBR3-203ENST00000417833 ACEP12821 1306 aa18.65■□□□□ 0.58
TGFBR3-203ENST00000417833 ARHGEF10O15013 1369 aa18.64■□□□□ 0.57
TGFBR3-203ENST00000417833 USP47Q96K76 1375 aa18.64■□□□□ 0.57
TGFBR3-203ENST00000417833 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
TGFBR3-203ENST00000417833 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
TGFBR3-203ENST00000417833 EP400Q96L91 3159 aa18.63■□□□□ 0.57
TGFBR3-203ENST00000417833 CABP1Q9NZU7 370 aa18.62■□□□□ 0.57
TGFBR3-203ENST00000417833 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
TGFBR3-203ENST00000417833 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
TGFBR3-203ENST00000417833 CCDC125Q86Z20 511 aa18.59■□□□□ 0.57
TGFBR3-203ENST00000417833 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
TGFBR3-203ENST00000417833 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
TGFBR3-203ENST00000417833 TMF1P82094 1093 aa18.56■□□□□ 0.56
TGFBR3-203ENST00000417833 USP6P35125 1406 aa18.56■□□□□ 0.56
TGFBR3-203ENST00000417833 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
TGFBR3-203ENST00000417833 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
TGFBR3-203ENST00000417833 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
TGFBR3-203ENST00000417833 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
TGFBR3-203ENST00000417833 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
TGFBR3-203ENST00000417833 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
TGFBR3-203ENST00000417833 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
TGFBR3-203ENST00000417833 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
TGFBR3-203ENST00000417833 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
TGFBR3-203ENST00000417833 FNBP4Q8N3X1 1017 aaPredicted RBP18.53■□□□□ 0.56
TGFBR3-203ENST00000417833 CRYBG1Q9Y4K1 1723 aa18.53■□□□□ 0.56
TGFBR3-203ENST00000417833 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.56
TGFBR3-203ENST00000417833 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
TGFBR3-203ENST00000417833 CD163L1Q9NR16 1453 aa18.51■□□□□ 0.55
TGFBR3-203ENST00000417833 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
TGFBR3-203ENST00000417833 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
TGFBR3-203ENST00000417833 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
TGFBR3-203ENST00000417833 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
TGFBR3-203ENST00000417833 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
TGFBR3-203ENST00000417833 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
TGFBR3-203ENST00000417833 USP21Q9UK80 565 aa18.49■□□□□ 0.55
TGFBR3-203ENST00000417833 KTN1Q86UP2 1357 aaKnown RBP18.49■□□□□ 0.55
TGFBR3-203ENST00000417833 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
TGFBR3-203ENST00000417833 NRKQ7Z2Y5 1582 aa18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 HDGFL2Q7Z4V5 671 aaPredicted RBP18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 USP19O94966 1318 aa18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
TGFBR3-203ENST00000417833 SLIT2O94813 1529 aa18.47■□□□□ 0.55
TGFBR3-203ENST00000417833 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
TGFBR3-203ENST00000417833 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.54
TGFBR3-203ENST00000417833 ATRNO75882 1429 aa18.45■□□□□ 0.54
TGFBR3-203ENST00000417833 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 NWD2Q9ULI1 1742 aa18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 EDC4Q6P2E9 1401 aaKnown RBP18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
TGFBR3-203ENST00000417833 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
TGFBR3-203ENST00000417833 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
TGFBR3-203ENST00000417833 LRP5O75197 1615 aa18.43■□□□□ 0.54
TGFBR3-203ENST00000417833 NLRP6P59044 892 aa18.43■□□□□ 0.54
TGFBR3-203ENST00000417833 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 GCP02774 474 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 UNC5CLQ8IV45 518 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 SLIT3O75094 1523 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 CPDO75976 1380 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
TGFBR3-203ENST00000417833 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
TGFBR3-203ENST00000417833 USP54Q70EL1 1684 aa18.41■□□□□ 0.54
TGFBR3-203ENST00000417833 MYOM1P52179 1685 aa18.39■□□□□ 0.53
TGFBR3-203ENST00000417833 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
TGFBR3-203ENST00000417833 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
TGFBR3-203ENST00000417833 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
TGFBR3-203ENST00000417833 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
TGFBR3-203ENST00000417833 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
TGFBR3-203ENST00000417833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
TGFBR3-203ENST00000417833 VPS72Q15906 364 aa18.36■□□□□ 0.53
TGFBR3-203ENST00000417833 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
TGFBR3-203ENST00000417833 GJD4Q96KN9 370 aaPredicted RBP18.36■□□□□ 0.53
TGFBR3-203ENST00000417833 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
TGFBR3-203ENST00000417833 NME9Q86XW9 330 aa18.35■□□□□ 0.53
TGFBR3-203ENST00000417833 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
TGFBR3-203ENST00000417833 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
TGFBR3-203ENST00000417833 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 NFAT5O94916 1531 aa18.32■□□□□ 0.52
TGFBR3-203ENST00000417833 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
TGFBR3-203ENST00000417833 GLI3P10071 1580 aa18.3■□□□□ 0.52
TGFBR3-203ENST00000417833 COL18A1P39060 1754 aa18.3■□□□□ 0.52
TGFBR3-203ENST00000417833 FYB1O15117 783 aa18.3■□□□□ 0.52
TGFBR3-203ENST00000417833 ONECUT3O60422 494 aaPredicted RBP18.3■□□□□ 0.52
TGFBR3-203ENST00000417833 DEFB132Q7Z7B7 95 aa18.3■□□□□ 0.52
TGFBR3-203ENST00000417833 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
TGFBR3-203ENST00000417833 ABCC6O95255 1503 aa18.28■□□□□ 0.52
TGFBR3-203ENST00000417833 COG3Q96JB2 828 aa18.28■□□□□ 0.52
TGFBR3-203ENST00000417833 SPATA31A5Q5VU36 1347 aa18.27■□□□□ 0.52
TGFBR3-203ENST00000417833 SPATA31A7Q8IWB4 1347 aa18.27■□□□□ 0.52
TGFBR3-203ENST00000417833 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms