RNA–Protein interactions for RNA: ENST00000417339.2

CENPVL3-201, Transcript of centromere protein V like 3, humanhuman

APPRIS P1 BASIC

Gene CENPVL3, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3-201ENST00000417339 VPS72Q15906 364 aa31.01■■■□□ 2.55
CENPVL3-201ENST00000417339 CCDC9Q9Y3X0 531 aaKnown RBP31■■■□□ 2.55
CENPVL3-201ENST00000417339 NEUROD1Q13562 356 aa30.99■■■□□ 2.55
CENPVL3-201ENST00000417339 COL14A1Q05707 1796 aaKnown RBP30.97■■■□□ 2.55
CENPVL3-201ENST00000417339 QRICH2Q9H0J4 1663 aa30.97■■■□□ 2.55
CENPVL3-201ENST00000417339 NUTM2GQ5VZR2 741 aa30.96■■■□□ 2.55
CENPVL3-201ENST00000417339 SEPT12Q8IYM1 358 aa30.96■■■□□ 2.55
CENPVL3-201ENST00000417339 BTG4Q9NY30 223 aa30.96■■■□□ 2.55
CENPVL3-201ENST00000417339 ACEP12821 1306 aa30.96■■■□□ 2.55
CENPVL3-201ENST00000417339 CCDC61Q9Y6R9 512 aa30.95■■■□□ 2.55
CENPVL3-201ENST00000417339 EP400Q96L91 3159 aa30.95■■■□□ 2.55
CENPVL3-201ENST00000417339 CENPJQ9HC77 1338 aaPredicted RBP30.95■■■□□ 2.54
CENPVL3-201ENST00000417339 NBPF8Q3BBV2 869 aa30.94■■■□□ 2.54
CENPVL3-201ENST00000417339 POLR3AO14802 1390 aaPredicted RBP30.93■■■□□ 2.54
CENPVL3-201ENST00000417339 CABP2Q9NPB3 220 aa30.93■■■□□ 2.54
CENPVL3-201ENST00000417339 TRPM1Q7Z4N2 1603 aa30.93■■■□□ 2.54
CENPVL3-201ENST00000417339 PHRF1Q9P1Y6 1649 aaKnown RBP30.92■■■□□ 2.54
CENPVL3-201ENST00000417339 PLEKHG3A1L390 1219 aa30.91■■■□□ 2.54
CENPVL3-201ENST00000417339 SRPK2P78362 688 aaKnown RBP30.9■■■□□ 2.54
CENPVL3-201ENST00000417339 ONECUT3O60422 494 aaPredicted RBP30.88■■■□□ 2.53
CENPVL3-201ENST00000417339 CHRNA2Q15822 529 aa30.87■■■□□ 2.53
CENPVL3-201ENST00000417339 PRDM11Q9NQV5 511 aa30.87■■■□□ 2.53
CENPVL3-201ENST00000417339 FAM98CQ17RN3 349 aaKnown RBP30.86■■■□□ 2.53
CENPVL3-201ENST00000417339 KIAA0232Q92628 1395 aa30.86■■■□□ 2.53
CENPVL3-201ENST00000417339 PPIP5K1Q6PFW1 1433 aa30.86■■■□□ 2.53
CENPVL3-201ENST00000417339 ZC3H6P61129 1189 aaKnown RBP30.85■■■□□ 2.53
CENPVL3-201ENST00000417339 A0A0G2JS52 829 aa30.83■■■□□ 2.53
CENPVL3-201ENST00000417339 MYT1Q01538 1121 aa30.83■■■□□ 2.53
CENPVL3-201ENST00000417339 KRT27Q7Z3Y8 459 aa30.81■■■□□ 2.52
CENPVL3-201ENST00000417339 ABTB2Q8N961 1025 aa30.81■■■□□ 2.52
CENPVL3-201ENST00000417339 SPATA31A5Q5VU36 1347 aa30.8■■■□□ 2.52
CENPVL3-201ENST00000417339 SPATA31A7Q8IWB4 1347 aa30.8■■■□□ 2.52
CENPVL3-201ENST00000417339 CCDC125Q86Z20 511 aa30.8■■■□□ 2.52
CENPVL3-201ENST00000417339 CABP1Q9NZU7 370 aa30.79■■■□□ 2.52
CENPVL3-201ENST00000417339 NRKQ7Z2Y5 1582 aa30.79■■■□□ 2.52
CENPVL3-201ENST00000417339 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
CENPVL3-201ENST00000417339 DEFB132Q7Z7B7 95 aa30.78■■■□□ 2.52
CENPVL3-201ENST00000417339 BLMP54132 1417 aaPredicted RBP30.78■■■□□ 2.52
CENPVL3-201ENST00000417339 STRN4Q9NRL3 753 aa30.77■■■□□ 2.52
CENPVL3-201ENST00000417339 FAM182BQ5T319 152 aa30.75■■■□□ 2.51
CENPVL3-201ENST00000417339 USP19O94966 1318 aa30.73■■■□□ 2.51
CENPVL3-201ENST00000417339 THSD7AQ9UPZ6 1657 aa30.73■■■□□ 2.51
CENPVL3-201ENST00000417339 CAMTA1Q9Y6Y1 1673 aa30.71■■■□□ 2.51
CENPVL3-201ENST00000417339 USP6P35125 1406 aa30.71■■■□□ 2.51
CENPVL3-201ENST00000417339 SPATA31A1Q5TZJ5 1347 aa30.71■■■□□ 2.51
CENPVL3-201ENST00000417339 EVC2Q86UK5 1308 aa30.71■■■□□ 2.51
CENPVL3-201ENST00000417339 LMO7Q8WWI1 1683 aa30.69■■■□□ 2.5
CENPVL3-201ENST00000417339 ZRANB1Q9UGI0 708 aa30.69■■■□□ 2.5
CENPVL3-201ENST00000417339 NLRP13Q86W25 1043 aa30.68■■■□□ 2.5
CENPVL3-201ENST00000417339 GCP02774 474 aa30.67■■■□□ 2.5
CENPVL3-201ENST00000417339 USP35Q9P2H5 1018 aa30.67■■■□□ 2.5
CENPVL3-201ENST00000417339 AKAP12Q02952 1782 aa30.66■■■□□ 2.5
CENPVL3-201ENST00000417339 SSH2Q76I76 1423 aa30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 PIK3C2AO00443 1686 aa30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 EVA1CP58658 441 aa30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 SF3B2Q13435 895 aaKnown RBP30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 LARP1Q6PKG0 1096 aaKnown RBP30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 CPDO75976 1380 aa30.65■■■□□ 2.5
CENPVL3-201ENST00000417339 NLRP6P59044 892 aa30.64■■■□□ 2.5
CENPVL3-201ENST00000417339 ZBTB7CA1YPR0 619 aa30.63■■■□□ 2.49
CENPVL3-201ENST00000417339 BRD4O60885 1362 aaPredicted RBP30.61■■■□□ 2.49
CENPVL3-201ENST00000417339 SLIT3O75094 1523 aa30.6■■■□□ 2.49
CENPVL3-201ENST00000417339 CARD11Q9BXL7 1154 aa30.59■■■□□ 2.49
CENPVL3-201ENST00000417339 RGPD1P0DJD0 1748 aa30.58■■■□□ 2.49
CENPVL3-201ENST00000417339 TONSLQ96HA7 1378 aa30.57■■■□□ 2.48
CENPVL3-201ENST00000417339 COL18A1P39060 1754 aa30.56■■■□□ 2.48
CENPVL3-201ENST00000417339 TNS1Q9HBL0 1735 aaKnown RBP30.56■■■□□ 2.48
CENPVL3-201ENST00000417339 TTC21BQ7Z4L5 1316 aa30.56■■■□□ 2.48
CENPVL3-201ENST00000417339 COL5A2P05997 1499 aaPredicted RBP30.56■■■□□ 2.48
CENPVL3-201ENST00000417339 RGPD5Q99666 1765 aa30.55■■■□□ 2.48
CENPVL3-201ENST00000417339 BAG6P46379 1132 aa30.53■■■□□ 2.48
CENPVL3-201ENST00000417339 EN1Q05925 392 aaPredicted RBP30.53■■■□□ 2.48
CENPVL3-201ENST00000417339 BARGINQ6ZT62 677 aa30.53■■■□□ 2.48
CENPVL3-201ENST00000417339 CPSF1Q10570 1443 aaKnown RBP30.53■■■□□ 2.48
CENPVL3-201ENST00000417339 TRIM26Q12899 539 aaPredicted RBP30.52■■■□□ 2.48
CENPVL3-201ENST00000417339 TCP11L2Q8N4U5 519 aa30.52■■■□□ 2.48
CENPVL3-201ENST00000417339 MON2Q7Z3U7 1717 aa30.52■■■□□ 2.48
CENPVL3-201ENST00000417339 SOX12O15370 315 aa30.51■■■□□ 2.47
CENPVL3-201ENST00000417339 ZNF692Q9BU19 519 aaPredicted RBP30.51■■■□□ 2.47
CENPVL3-201ENST00000417339 SBNO2Q9Y2G9 1366 aa30.5■■■□□ 2.47
CENPVL3-201ENST00000417339 TRIM37O94972 964 aa30.49■■■□□ 2.47
CENPVL3-201ENST00000417339 AXIN2Q9Y2T1 843 aa30.49■■■□□ 2.47
CENPVL3-201ENST00000417339 AATKQ6ZMQ8 1374 aa30.49■■■□□ 2.47
CENPVL3-201ENST00000417339 KTN1Q86UP2 1357 aaKnown RBP30.49■■■□□ 2.47
CENPVL3-201ENST00000417339 SRCAPQ6ZRS2 3230 aa30.47■■■□□ 2.47
CENPVL3-201ENST00000417339 CD163L1Q9NR16 1453 aa30.46■■■□□ 2.47
CENPVL3-201ENST00000417339 PSDA5PKW4 1024 aaPredicted RBP30.45■■■□□ 2.47
CENPVL3-201ENST00000417339 FAM196AQ6ZSG2 479 aa30.45■■■□□ 2.47
CENPVL3-201ENST00000417339 CRB1P82279 1406 aa30.45■■■□□ 2.46
CENPVL3-201ENST00000417339 TTC21AQ8NDW8 1320 aa30.45■■■□□ 2.46
CENPVL3-201ENST00000417339 PARP4Q9UKK3 1724 aaKnown RBP30.44■■■□□ 2.46
CENPVL3-201ENST00000417339 PDE3BQ13370 1112 aa30.44■■■□□ 2.46
CENPVL3-201ENST00000417339 ARHGEF25Q86VW2 580 aa30.44■■■□□ 2.46
CENPVL3-201ENST00000417339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.44■■■□□ 2.46
CENPVL3-201ENST00000417339 EZH2Q15910 746 aaKnown RBP30.43■■■□□ 2.46
CENPVL3-201ENST00000417339 TMC1Q8TDI8 760 aa30.43■■■□□ 2.46
CENPVL3-201ENST00000417339 SLC12A5Q9H2X9 1139 aa30.43■■■□□ 2.46
CENPVL3-201ENST00000417339 THRAP3Q9Y2W1 955 aaKnown RBP30.42■■■□□ 2.46
CENPVL3-201ENST00000417339 NFAT5O94916 1531 aa30.42■■■□□ 2.46
CENPVL3-201ENST00000417339 TOM1L2Q6ZVM7 507 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms