RNA–Protein interactions for RNA: ENST00000417009.5

SEM1-204, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3 BASIC

Gene SEM1, Length 350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-204ENST00000417009 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
SEM1-204ENST00000417009 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
SEM1-204ENST00000417009 TCP11L2Q8N4U5 519 aa13.24□□□□□ -0.29
SEM1-204ENST00000417009 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
SEM1-204ENST00000417009 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
SEM1-204ENST00000417009 RIMS1Q86UR5 1692 aaKnown RBP13.23□□□□□ -0.29
SEM1-204ENST00000417009 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
SEM1-204ENST00000417009 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
SEM1-204ENST00000417009 MS4A1P11836 297 aa13.22□□□□□ -0.29
SEM1-204ENST00000417009 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
SEM1-204ENST00000417009 COG3Q96JB2 828 aa13.22□□□□□ -0.29
SEM1-204ENST00000417009 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
SEM1-204ENST00000417009 RBM19Q9Y4C8 960 aaKnown RBP13.22□□□□□ -0.29
SEM1-204ENST00000417009 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
SEM1-204ENST00000417009 IL16Q14005 1332 aa13.21□□□□□ -0.29
SEM1-204ENST00000417009 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
SEM1-204ENST00000417009 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
SEM1-204ENST00000417009 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
SEM1-204ENST00000417009 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
SEM1-204ENST00000417009 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
SEM1-204ENST00000417009 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
SEM1-204ENST00000417009 FCHSD2O94868 740 aa13.2□□□□□ -0.3
SEM1-204ENST00000417009 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
SEM1-204ENST00000417009 ZNF142P52746 1687 aaPredicted RBP13.2□□□□□ -0.3
SEM1-204ENST00000417009 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
SEM1-204ENST00000417009 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
SEM1-204ENST00000417009 PLEKHG3A1L390 1219 aa13.18□□□□□ -0.3
SEM1-204ENST00000417009 LTKP29376 864 aa13.18□□□□□ -0.3
SEM1-204ENST00000417009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEM1-204ENST00000417009 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
SEM1-204ENST00000417009 ROBO2Q9HCK4 1378 aa13.18□□□□□ -0.3
SEM1-204ENST00000417009 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
SEM1-204ENST00000417009 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
SEM1-204ENST00000417009 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
SEM1-204ENST00000417009 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
SEM1-204ENST00000417009 CEBPAP49715 358 aaPredicted RBP13.17□□□□□ -0.3
SEM1-204ENST00000417009 LMOD3Q0VAK6 560 aa13.17□□□□□ -0.3
SEM1-204ENST00000417009 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
SEM1-204ENST00000417009 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
SEM1-204ENST00000417009 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
SEM1-204ENST00000417009 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
SEM1-204ENST00000417009 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SEM1-204ENST00000417009 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
SEM1-204ENST00000417009 MYT1Q01538 1121 aa13.15□□□□□ -0.3
SEM1-204ENST00000417009 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
SEM1-204ENST00000417009 PLIN1O60240 522 aa13.14□□□□□ -0.31
SEM1-204ENST00000417009 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
SEM1-204ENST00000417009 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
SEM1-204ENST00000417009 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
SEM1-204ENST00000417009 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
SEM1-204ENST00000417009 SLC26A8Q96RN1 970 aa13.13□□□□□ -0.31
SEM1-204ENST00000417009 USP6P35125 1406 aa13.13□□□□□ -0.31
SEM1-204ENST00000417009 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
SEM1-204ENST00000417009 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
SEM1-204ENST00000417009 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
SEM1-204ENST00000417009 LRRC7Q96NW7 1537 aa13.12□□□□□ -0.31
SEM1-204ENST00000417009 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
SEM1-204ENST00000417009 ACEP12821 1306 aa13.12□□□□□ -0.31
SEM1-204ENST00000417009 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
SEM1-204ENST00000417009 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
SEM1-204ENST00000417009 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
SEM1-204ENST00000417009 RIPK4P57078 832 aa13.11□□□□□ -0.31
SEM1-204ENST00000417009 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
SEM1-204ENST00000417009 NME9Q86XW9 330 aa13.1□□□□□ -0.31
SEM1-204ENST00000417009 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
SEM1-204ENST00000417009 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
SEM1-204ENST00000417009 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
SEM1-204ENST00000417009 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
SEM1-204ENST00000417009 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
SEM1-204ENST00000417009 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
SEM1-204ENST00000417009 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
SEM1-204ENST00000417009 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.31
SEM1-204ENST00000417009 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
SEM1-204ENST00000417009 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
SEM1-204ENST00000417009 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.32
SEM1-204ENST00000417009 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
SEM1-204ENST00000417009 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
SEM1-204ENST00000417009 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 BCAR3O75815 825 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 IL13P35225 146 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 GNAI1P63096 354 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
SEM1-204ENST00000417009 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
SEM1-204ENST00000417009 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
SEM1-204ENST00000417009 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
SEM1-204ENST00000417009 CLUAP1Q96AJ1 413 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
SEM1-204ENST00000417009 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms