RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 FAM83GA6ND36 823 aa13.94□□□□□ -0.18
CALCOCO2-203ENST00000416445 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
CALCOCO2-203ENST00000416445 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO2-203ENST00000416445 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
CALCOCO2-203ENST00000416445 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
CALCOCO2-203ENST00000416445 NUTM2GQ5VZR2 741 aa13.92□□□□□ -0.18
CALCOCO2-203ENST00000416445 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
CALCOCO2-203ENST00000416445 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
CALCOCO2-203ENST00000416445 EIF3AQ14152 1382 aaKnown RBP13.91□□□□□ -0.18
CALCOCO2-203ENST00000416445 GPRASP1Q5JY77 1395 aa13.91□□□□□ -0.18
CALCOCO2-203ENST00000416445 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
CALCOCO2-203ENST00000416445 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
CALCOCO2-203ENST00000416445 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-203ENST00000416445 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
CALCOCO2-203ENST00000416445 ACEP12821 1306 aa13.9□□□□□ -0.18
CALCOCO2-203ENST00000416445 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-203ENST00000416445 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
CALCOCO2-203ENST00000416445 VPS72Q15906 364 aa13.88□□□□□ -0.19
CALCOCO2-203ENST00000416445 PPIP5K1Q6PFW1 1433 aa13.87□□□□□ -0.19
CALCOCO2-203ENST00000416445 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
CALCOCO2-203ENST00000416445 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
CALCOCO2-203ENST00000416445 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
CALCOCO2-203ENST00000416445 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
CALCOCO2-203ENST00000416445 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
CALCOCO2-203ENST00000416445 KIAA0232Q92628 1395 aa13.86□□□□□ -0.19
CALCOCO2-203ENST00000416445 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
CALCOCO2-203ENST00000416445 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
CALCOCO2-203ENST00000416445 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
CALCOCO2-203ENST00000416445 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
CALCOCO2-203ENST00000416445 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
CALCOCO2-203ENST00000416445 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
CALCOCO2-203ENST00000416445 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
CALCOCO2-203ENST00000416445 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
CALCOCO2-203ENST00000416445 LMO7Q8WWI1 1683 aa13.83□□□□□ -0.2
CALCOCO2-203ENST00000416445 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
CALCOCO2-203ENST00000416445 ONECUT3O60422 494 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO2-203ENST00000416445 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-203ENST00000416445 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
CALCOCO2-203ENST00000416445 FAM182BQ5T319 152 aa13.81□□□□□ -0.2
CALCOCO2-203ENST00000416445 USP19O94966 1318 aa13.81□□□□□ -0.2
CALCOCO2-203ENST00000416445 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
CALCOCO2-203ENST00000416445 PRDM11Q9NQV5 511 aa13.81□□□□□ -0.2
CALCOCO2-203ENST00000416445 USP6P35125 1406 aa13.8□□□□□ -0.2
CALCOCO2-203ENST00000416445 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
CALCOCO2-203ENST00000416445 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
CALCOCO2-203ENST00000416445 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
CALCOCO2-203ENST00000416445 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
CALCOCO2-203ENST00000416445 DEFB132Q7Z7B7 95 aa13.79□□□□□ -0.2
CALCOCO2-203ENST00000416445 COL18A1P39060 1754 aa13.79□□□□□ -0.2
CALCOCO2-203ENST00000416445 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
CALCOCO2-203ENST00000416445 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
CALCOCO2-203ENST00000416445 SLIT3O75094 1523 aa13.77□□□□□ -0.2
CALCOCO2-203ENST00000416445 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
CALCOCO2-203ENST00000416445 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
CALCOCO2-203ENST00000416445 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-203ENST00000416445 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO2-203ENST00000416445 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
CALCOCO2-203ENST00000416445 EVC2Q86UK5 1308 aa13.76□□□□□ -0.21
CALCOCO2-203ENST00000416445 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 A0A0G2JS52 829 aa13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 GCP02774 474 aa13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 MYT1Q01538 1121 aa13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 CPDO75976 1380 aa13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-203ENST00000416445 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
CALCOCO2-203ENST00000416445 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
CALCOCO2-203ENST00000416445 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
CALCOCO2-203ENST00000416445 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-203ENST00000416445 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
CALCOCO2-203ENST00000416445 NLRP6P59044 892 aa13.73□□□□□ -0.21
CALCOCO2-203ENST00000416445 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
CALCOCO2-203ENST00000416445 NFAT5O94916 1531 aa13.72□□□□□ -0.21
CALCOCO2-203ENST00000416445 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
CALCOCO2-203ENST00000416445 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
CALCOCO2-203ENST00000416445 RGPD1P0DJD0 1748 aa13.72□□□□□ -0.21
CALCOCO2-203ENST00000416445 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.21
CALCOCO2-203ENST00000416445 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.22
CALCOCO2-203ENST00000416445 SOX12O15370 315 aa13.7□□□□□ -0.22
CALCOCO2-203ENST00000416445 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
CALCOCO2-203ENST00000416445 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
CALCOCO2-203ENST00000416445 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
CALCOCO2-203ENST00000416445 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
CALCOCO2-203ENST00000416445 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
CALCOCO2-203ENST00000416445 TESK2Q96S53 571 aa13.69□□□□□ -0.22
CALCOCO2-203ENST00000416445 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
CALCOCO2-203ENST00000416445 LTN1O94822 1766 aa13.68□□□□□ -0.22
CALCOCO2-203ENST00000416445 BRD4O60885 1362 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO2-203ENST00000416445 EVA1CP58658 441 aa13.68□□□□□ -0.22
CALCOCO2-203ENST00000416445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
CALCOCO2-203ENST00000416445 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
CALCOCO2-203ENST00000416445 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO2-203ENST00000416445 NME9Q86XW9 330 aa13.67□□□□□ -0.22
CALCOCO2-203ENST00000416445 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
CALCOCO2-203ENST00000416445 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
CALCOCO2-203ENST00000416445 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
CALCOCO2-203ENST00000416445 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
CALCOCO2-203ENST00000416445 TRIM37O94972 964 aa13.65□□□□□ -0.22
CALCOCO2-203ENST00000416445 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms