RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 NME9Q86XW9 330 aa17.7■□□□□ 0.42
PTPN6-203ENST00000416215 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
PTPN6-203ENST00000416215 E9PSI1 815 aa17.69■□□□□ 0.42
PTPN6-203ENST00000416215 COL3A1P02461 1466 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-203ENST00000416215 EDC4Q6P2E9 1401 aaKnown RBP17.68■□□□□ 0.42
PTPN6-203ENST00000416215 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
PTPN6-203ENST00000416215 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
PTPN6-203ENST00000416215 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
PTPN6-203ENST00000416215 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
PTPN6-203ENST00000416215 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
PTPN6-203ENST00000416215 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
PTPN6-203ENST00000416215 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
PTPN6-203ENST00000416215 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
PTPN6-203ENST00000416215 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
PTPN6-203ENST00000416215 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
PTPN6-203ENST00000416215 NKTRP30414 1462 aaKnown RBP17.65■□□□□ 0.42
PTPN6-203ENST00000416215 PLEKHF1Q96S99 279 aa17.64■□□□□ 0.42
PTPN6-203ENST00000416215 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
PTPN6-203ENST00000416215 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
PTPN6-203ENST00000416215 MAP2P11137 1827 aaKnown RBP17.64■□□□□ 0.41
PTPN6-203ENST00000416215 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
PTPN6-203ENST00000416215 ADGRB2O60241 1585 aa17.63■□□□□ 0.41
PTPN6-203ENST00000416215 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
PTPN6-203ENST00000416215 ACEP12821 1306 aa17.63■□□□□ 0.41
PTPN6-203ENST00000416215 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
PTPN6-203ENST00000416215 COG3Q96JB2 828 aa17.62■□□□□ 0.41
PTPN6-203ENST00000416215 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
PTPN6-203ENST00000416215 BCAR3O75815 825 aa17.61■□□□□ 0.41
PTPN6-203ENST00000416215 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
PTPN6-203ENST00000416215 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
PTPN6-203ENST00000416215 KCNA6P17658 529 aa17.61■□□□□ 0.41
PTPN6-203ENST00000416215 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
PTPN6-203ENST00000416215 PLEKHG3A1L390 1219 aa17.6■□□□□ 0.41
PTPN6-203ENST00000416215 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
PTPN6-203ENST00000416215 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
PTPN6-203ENST00000416215 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
PTPN6-203ENST00000416215 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
PTPN6-203ENST00000416215 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
PTPN6-203ENST00000416215 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.41
PTPN6-203ENST00000416215 DIP2AQ14689 1571 aa17.58■□□□□ 0.4
PTPN6-203ENST00000416215 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
PTPN6-203ENST00000416215 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
PTPN6-203ENST00000416215 ADAMTSL3P82987 1691 aa17.57■□□□□ 0.4
PTPN6-203ENST00000416215 MYT1Q01538 1121 aa17.57■□□□□ 0.4
PTPN6-203ENST00000416215 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
PTPN6-203ENST00000416215 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
PTPN6-203ENST00000416215 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
PTPN6-203ENST00000416215 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
PTPN6-203ENST00000416215 AATKQ6ZMQ8 1374 aa17.56■□□□□ 0.4
PTPN6-203ENST00000416215 HMOX1P09601 288 aa17.56■□□□□ 0.4
PTPN6-203ENST00000416215 FCHSD2O94868 740 aa17.55■□□□□ 0.4
PTPN6-203ENST00000416215 XRN1Q8IZH2 1706 aaKnown RBP17.55■□□□□ 0.4
PTPN6-203ENST00000416215 USP6P35125 1406 aa17.55■□□□□ 0.4
PTPN6-203ENST00000416215 IL13P35225 146 aa17.55■□□□□ 0.4
PTPN6-203ENST00000416215 RIPK4P57078 832 aa17.55■□□□□ 0.4
PTPN6-203ENST00000416215 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
PTPN6-203ENST00000416215 SETD1BQ9UPS6 1966 aaKnown RBP17.54■□□□□ 0.4
PTPN6-203ENST00000416215 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
PTPN6-203ENST00000416215 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
PTPN6-203ENST00000416215 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
PTPN6-203ENST00000416215 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
PTPN6-203ENST00000416215 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.4
PTPN6-203ENST00000416215 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
PTPN6-203ENST00000416215 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.4
PTPN6-203ENST00000416215 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
PTPN6-203ENST00000416215 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
PTPN6-203ENST00000416215 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
PTPN6-203ENST00000416215 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
PTPN6-203ENST00000416215 LRRC7Q96NW7 1537 aa17.51■□□□□ 0.39
PTPN6-203ENST00000416215 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
PTPN6-203ENST00000416215 SOX12O15370 315 aa17.5■□□□□ 0.39
PTPN6-203ENST00000416215 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
PTPN6-203ENST00000416215 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
PTPN6-203ENST00000416215 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
PTPN6-203ENST00000416215 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
PTPN6-203ENST00000416215 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
PTPN6-203ENST00000416215 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
PTPN6-203ENST00000416215 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
PTPN6-203ENST00000416215 NEFMP07197 916 aa17.48■□□□□ 0.39
PTPN6-203ENST00000416215 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
PTPN6-203ENST00000416215 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
PTPN6-203ENST00000416215 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.38
PTPN6-203ENST00000416215 PANK1Q8TE04 598 aa17.46■□□□□ 0.38
PTPN6-203ENST00000416215 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
PTPN6-203ENST00000416215 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
PTPN6-203ENST00000416215 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
PTPN6-203ENST00000416215 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
PTPN6-203ENST00000416215 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
PTPN6-203ENST00000416215 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
PTPN6-203ENST00000416215 IL16Q14005 1332 aa17.44■□□□□ 0.38
PTPN6-203ENST00000416215 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
PTPN6-203ENST00000416215 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
PTPN6-203ENST00000416215 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
PTPN6-203ENST00000416215 ANKARQ7Z5J8 1434 aa17.43■□□□□ 0.38
PTPN6-203ENST00000416215 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
PTPN6-203ENST00000416215 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
PTPN6-203ENST00000416215 AEBP1Q8IUX7 1158 aa17.42■□□□□ 0.38
PTPN6-203ENST00000416215 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
PTPN6-203ENST00000416215 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
PTPN6-203ENST00000416215 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms