RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 SWAP70Q9UH65 585 aa8.29□□□□□ -1.08
CLIP4-205ENST00000415891 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 PES1O00541 588 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 IGHDP01880 384 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 HDLBPQ00341 1268 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 POU5F1Q01860 360 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 CBFA2T2O43439 604 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 PSMC1P62191 440 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 NCAPGQ9BPX3 1015 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 TSPYL1Q9H0U9 437 aa8.28□□□□□ -1.08
CLIP4-205ENST00000415891 MAP3K20Q9NYL2 800 aaKnown RBP8.28□□□□□ -1.08
CLIP4-205ENST00000415891 CCDC189A1A4V9 331 aa8.27□□□□□ -1.09
CLIP4-205ENST00000415891 NAP1L1P55209 391 aaKnown RBP8.27□□□□□ -1.09
CLIP4-205ENST00000415891 PSME1Q06323 249 aa8.27□□□□□ -1.09
CLIP4-205ENST00000415891 RSPH9Q9H1X1 276 aaPredicted RBP8.27□□□□□ -1.09
CLIP4-205ENST00000415891 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
CLIP4-205ENST00000415891 KIF1CO43896 1103 aaKnown RBP8.27□□□□□ -1.09
CLIP4-205ENST00000415891 IPO7O95373 1038 aaKnown RBP8.27□□□□□ -1.09
CLIP4-205ENST00000415891 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
CLIP4-205ENST00000415891 AGBL1Q96MI9 1066 aa8.27□□□□□ -1.09
CLIP4-205ENST00000415891 C8orf37Q96NL8 207 aa8.27□□□□□ -1.09
CLIP4-205ENST00000415891 CAPN2P17655 700 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 RSPH1Q8WYR4 309 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 CHPF2Q9P2E5 772 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 ZMYND10O75800 440 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 VDRP11473 427 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 NEFHP12036 1026 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 C22orf23Q9BZE7 217 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
CLIP4-205ENST00000415891 IFT88Q13099 833 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
CLIP4-205ENST00000415891 MFSD4BQ5TF39 518 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 LARGE2Q8N3Y3 721 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 INO80BQ9C086 356 aaPredicted RBP8.24□□□□□ -1.09
CLIP4-205ENST00000415891 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 BICDL2A1A5D9 508 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 ATXN8OSP0DMR3 200 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 ABCD1P33897 745 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 EVA1CP58658 441 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
CLIP4-205ENST00000415891 ENOX1Q8TC92 643 aaKnown RBP8.24□□□□□ -1.09
CLIP4-205ENST00000415891 SCYL1Q96KG9 808 aa8.24□□□□□ -1.09
CLIP4-205ENST00000415891 LARP6Q9BRS8 491 aaKnown RBP8.24□□□□□ -1.09
CLIP4-205ENST00000415891 IPO5O00410 1097 aaKnown RBP8.23□□□□□ -1.09
CLIP4-205ENST00000415891 CASQ1P31415 396 aa8.23□□□□□ -1.09
CLIP4-205ENST00000415891 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
CLIP4-205ENST00000415891 DPH6Q7L8W6 267 aa8.23□□□□□ -1.09
CLIP4-205ENST00000415891 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
CLIP4-205ENST00000415891 SUN2Q9UH99 717 aa8.23□□□□□ -1.09
CLIP4-205ENST00000415891 KIF3CO14782 793 aa8.23□□□□□ -1.09
CLIP4-205ENST00000415891 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
CLIP4-205ENST00000415891 CGNQ9P2M7 1197 aaKnown RBP8.23□□□□□ -1.09
CLIP4-205ENST00000415891 SKILP12757 684 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 GJC2Q5T442 439 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-205ENST00000415891 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 CAPN15O75808 1086 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 TPM3P06753 285 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 HNRNPUL2Q1KMD3 747 aaKnown RBP8.22□□□□□ -1.09
CLIP4-205ENST00000415891 CADPS2Q86UW7 1296 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 ZBTB9Q96C00 473 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 SEZ6LQ9BYH1 1024 aa8.22□□□□□ -1.09
CLIP4-205ENST00000415891 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 NAT2P11245 290 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 MS4A1P11836 297 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 TXNDC2Q86VQ3 553 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
CLIP4-205ENST00000415891 TGFB3P10600 412 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 PSMD2Q13200 908 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 C11orf91Q3C1V1 193 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 HSP90B2PQ58FF3 399 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 L1TD1Q5T7N2 865 aaKnown RBP8.2□□□□□ -1.1
CLIP4-205ENST00000415891 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 PDILTQ8N807 584 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 JMYQ8N9B5 988 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 CFAP65Q6ZU64 1925 aaKnown RBP8.2□□□□□ -1.1
CLIP4-205ENST00000415891 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 TERF1P54274 439 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 MLECQ14165 292 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 TTC30AQ86WT1 665 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 HSCBQ8IWL3 235 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 CCDC146Q8IYE0 955 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 RETREG1Q9H6L5 497 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLIP4-205ENST00000415891 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
CLIP4-205ENST00000415891 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
CLIP4-205ENST00000415891 EIF5P55010 431 aaKnown RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 IGBP1P78318 339 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 LARP1BQ659C4 914 aaKnown RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 MNS1Q8NEH6 495 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 hCG_2014768A0A024R1R8 64 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 ERICH4A6NGS2 130 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms