RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 EDC4Q6P2E9 1401 aaKnown RBP19.89■□□□□ 0.77
SGCE-202ENST00000415788 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
SGCE-202ENST00000415788 SSH2Q76I76 1423 aa19.87■□□□□ 0.77
SGCE-202ENST00000415788 XPCQ01831 940 aaPredicted RBP19.87■□□□□ 0.77
SGCE-202ENST00000415788 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
SGCE-202ENST00000415788 MON2Q7Z3U7 1717 aa19.86■□□□□ 0.77
SGCE-202ENST00000415788 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
SGCE-202ENST00000415788 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
SGCE-202ENST00000415788 TTC21BQ7Z4L5 1316 aa19.85■□□□□ 0.77
SGCE-202ENST00000415788 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
SGCE-202ENST00000415788 NSD3Q9BZ95 1437 aa19.84■□□□□ 0.77
SGCE-202ENST00000415788 SPATA31A3Q5VYP0 1347 aa19.84■□□□□ 0.77
SGCE-202ENST00000415788 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
SGCE-202ENST00000415788 NRKQ7Z2Y5 1582 aa19.83■□□□□ 0.77
SGCE-202ENST00000415788 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
SGCE-202ENST00000415788 ARHGEF10O15013 1369 aa19.83■□□□□ 0.77
SGCE-202ENST00000415788 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.76
SGCE-202ENST00000415788 COL16A1Q07092 1604 aaPredicted RBP19.83■□□□□ 0.76
SGCE-202ENST00000415788 TRPM3Q9HCF6 1732 aaPredicted RBP19.82■□□□□ 0.76
SGCE-202ENST00000415788 DDX10Q13206 875 aaKnown RBP19.82■□□□□ 0.76
SGCE-202ENST00000415788 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
SGCE-202ENST00000415788 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
SGCE-202ENST00000415788 HSPA1LP34931 641 aa19.8■□□□□ 0.76
SGCE-202ENST00000415788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.767e-6■■□□□ 11.5
SGCE-202ENST00000415788 ABTB2Q8N961 1025 aa19.8■□□□□ 0.76
SGCE-202ENST00000415788 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
SGCE-202ENST00000415788 NSD2O96028 1365 aa19.77■□□□□ 0.76
SGCE-202ENST00000415788 USP31Q70CQ4 1352 aa19.77■□□□□ 0.76
SGCE-202ENST00000415788 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
SGCE-202ENST00000415788 ALS2Q96Q42 1657 aa19.77■□□□□ 0.76
SGCE-202ENST00000415788 JCADQ9P266 1359 aa19.77■□□□□ 0.76
SGCE-202ENST00000415788 NPC1L1Q9UHC9 1359 aa19.76■□□□□ 0.75
SGCE-202ENST00000415788 FYB1O15117 783 aa19.76■□□□□ 0.75
SGCE-202ENST00000415788 NME9Q86XW9 330 aa19.76■□□□□ 0.75
SGCE-202ENST00000415788 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
SGCE-202ENST00000415788 NLRP6P59044 892 aa19.75■□□□□ 0.75
SGCE-202ENST00000415788 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
SGCE-202ENST00000415788 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
SGCE-202ENST00000415788 PIK3C2AO00443 1686 aa19.74■□□□□ 0.75
SGCE-202ENST00000415788 COG3Q96JB2 828 aa19.73■□□□□ 0.75
SGCE-202ENST00000415788 MED1Q15648 1581 aaPredicted RBP19.73■□□□□ 0.75
SGCE-202ENST00000415788 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
SGCE-202ENST00000415788 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
SGCE-202ENST00000415788 USP19O94966 1318 aa19.72■□□□□ 0.75
SGCE-202ENST00000415788 GGNBP2Q9H3C7 697 aa19.72■□□□□ 0.75
SGCE-202ENST00000415788 COL22A1Q8NFW1 1626 aaPredicted RBP19.71■□□□□ 0.75
SGCE-202ENST00000415788 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
SGCE-202ENST00000415788 USP54Q70EL1 1684 aa19.71■□□□□ 0.75
SGCE-202ENST00000415788 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
SGCE-202ENST00000415788 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
SGCE-202ENST00000415788 KIF20BQ96Q89 1820 aa19.7■□□□□ 0.74
SGCE-202ENST00000415788 KCNH5Q8NCM2 988 aa19.69■□□□□ 0.74
SGCE-202ENST00000415788 ZRANB1Q9UGI0 708 aa19.69■□□□□ 0.74
SGCE-202ENST00000415788 SLIT3O75094 1523 aa19.68■□□□□ 0.74
SGCE-202ENST00000415788 GCP02774 474 aa19.67■□□□□ 0.74
SGCE-202ENST00000415788 HAP1P54257 671 aaPredicted RBP19.67■□□□□ 0.74
SGCE-202ENST00000415788 CC2D1BQ5T0F9 858 aaKnown RBP19.67■□□□□ 0.74
SGCE-202ENST00000415788 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
SGCE-202ENST00000415788 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
SGCE-202ENST00000415788 ANKRD26Q9UPS8 1709 aa19.64■□□□□ 0.73
SGCE-202ENST00000415788 MARF1Q9Y4F3 1742 aaKnown RBP19.63■□□□□ 0.73
SGCE-202ENST00000415788 AATKQ6ZMQ8 1374 aa19.63■□□□□ 0.73
SGCE-202ENST00000415788 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
SGCE-202ENST00000415788 PLEKHG5O94827 1062 aa19.62■□□□□ 0.73
SGCE-202ENST00000415788 PHRF1Q9P1Y6 1649 aaKnown RBP19.62■□□□□ 0.73
SGCE-202ENST00000415788 RALBP1Q15311 655 aa19.61■□□□□ 0.73
SGCE-202ENST00000415788 ILDR1Q86SU0 546 aaPredicted RBP19.61■□□□□ 0.73
SGCE-202ENST00000415788 CPDO75976 1380 aa19.61■□□□□ 0.73
SGCE-202ENST00000415788 ABCA3Q99758 1704 aa19.61■□□□□ 0.73
SGCE-202ENST00000415788 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
SGCE-202ENST00000415788 NFAT5O94916 1531 aa19.6■□□□□ 0.73
SGCE-202ENST00000415788 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
SGCE-202ENST00000415788 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
SGCE-202ENST00000415788 SOX12O15370 315 aa19.6■□□□□ 0.73
SGCE-202ENST00000415788 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
SGCE-202ENST00000415788 CNGB1Q14028 1251 aaPredicted RBP19.58■□□□□ 0.73
SGCE-202ENST00000415788 ARHGEF25Q86VW2 580 aa19.58■□□□□ 0.73
SGCE-202ENST00000415788 ZC3H6P61129 1189 aaKnown RBP19.58■□□□□ 0.72
SGCE-202ENST00000415788 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
SGCE-202ENST00000415788 ANP32CO43423 234 aa19.57■□□□□ 0.72
SGCE-202ENST00000415788 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
SGCE-202ENST00000415788 PRDM11Q9NQV5 511 aa19.57■□□□□ 0.72
SGCE-202ENST00000415788 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
SGCE-202ENST00000415788 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
SGCE-202ENST00000415788 ADAMTS2O95450 1211 aa19.56■□□□□ 0.72
SGCE-202ENST00000415788 LRP6O75581 1613 aa19.55■□□□□ 0.72
SGCE-202ENST00000415788 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
SGCE-202ENST00000415788 TSHZ2Q9NRE2 1034 aa19.55■□□□□ 0.72
SGCE-202ENST00000415788 RTL1A6NKG5 1358 aa19.55■□□□□ 0.72
SGCE-202ENST00000415788 ABCC6O95255 1503 aa19.55■□□□□ 0.72
SGCE-202ENST00000415788 RRS1Q15050 365 aaKnown RBP19.54■□□□□ 0.72
SGCE-202ENST00000415788 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
SGCE-202ENST00000415788 POLKQ9UBT6 870 aa19.54■□□□□ 0.72
SGCE-202ENST00000415788 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
SGCE-202ENST00000415788 FBLN1P23142 703 aa19.53■□□□□ 0.72
SGCE-202ENST00000415788 AMPHP49418 695 aa19.52■□□□□ 0.72
SGCE-202ENST00000415788 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.72
SGCE-202ENST00000415788 FAM83GA6ND36 823 aa19.52■□□□□ 0.71
SGCE-202ENST00000415788 PPP2R1AP30153 589 aa19.52■□□□□ 0.71
SGCE-202ENST00000415788 FLT4P35916 1363 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms