RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ACEP12821 1306 aa35.78■■■■□ 3.32
HLA-C-204ENST00000415537 ROCK2O75116 1388 aaKnown RBP35.77■■■■□ 3.32
HLA-C-204ENST00000415537 ATAD2Q6PL18 1390 aa35.76■■■■□ 3.32
HLA-C-204ENST00000415537 FAM83GA6ND36 823 aa35.76■■■■□ 3.32
HLA-C-204ENST00000415537 POLR3AO14802 1390 aaPredicted RBP35.76■■■■□ 3.31
HLA-C-204ENST00000415537 PLEKHG3A1L390 1219 aa35.75■■■■□ 3.31
HLA-C-204ENST00000415537 NBPF8Q3BBV2 869 aa35.75■■■■□ 3.31
HLA-C-204ENST00000415537 RALGAPBQ86X10 1494 aa35.74■■■■□ 3.31
HLA-C-204ENST00000415537 CABP2Q9NPB3 220 aa35.73■■■■□ 3.31
HLA-C-204ENST00000415537 CCDC9Q9Y3X0 531 aaKnown RBP35.73■■■■□ 3.31
HLA-C-204ENST00000415537 GLI3P10071 1580 aa35.72■■■■□ 3.31
HLA-C-204ENST00000415537 VPS72Q15906 364 aa35.71■■■■□ 3.31
HLA-C-204ENST00000415537 PPIP5K1Q6PFW1 1433 aa35.7■■■■□ 3.31
HLA-C-204ENST00000415537 COL14A1Q05707 1796 aaKnown RBP35.69■■■■□ 3.3
HLA-C-204ENST00000415537 CRYBG1Q9Y4K1 1723 aa35.69■■■■□ 3.3
HLA-C-204ENST00000415537 BTG4Q9NY30 223 aa35.67■■■■□ 3.3
HLA-C-204ENST00000415537 TONSLQ96HA7 1378 aa35.66■■■■□ 3.3
HLA-C-204ENST00000415537 EVC2Q86UK5 1308 aa35.66■■■■□ 3.3
HLA-C-204ENST00000415537 NUTM2GQ5VZR2 741 aa35.65■■■■□ 3.3
HLA-C-204ENST00000415537 ABTB2Q8N961 1025 aa35.63■■■■□ 3.29
HLA-C-204ENST00000415537 PRDM11Q9NQV5 511 aa35.63■■■■□ 3.29
HLA-C-204ENST00000415537 NRAPQ86VF7 1730 aa35.62■■■■□ 3.29
HLA-C-204ENST00000415537 PHRF1Q9P1Y6 1649 aaKnown RBP35.61■■■■□ 3.29
HLA-C-204ENST00000415537 CABP1Q9NZU7 370 aa35.6■■■■□ 3.29
HLA-C-204ENST00000415537 SEPT12Q8IYM1 358 aa35.59■■■■□ 3.29
HLA-C-204ENST00000415537 BRWD3Q6RI45 1802 aa35.58■■■■□ 3.29
HLA-C-204ENST00000415537 KIAA0232Q92628 1395 aa35.56■■■■□ 3.28
HLA-C-204ENST00000415537 CARD11Q9BXL7 1154 aa35.56■■■■□ 3.28
HLA-C-204ENST00000415537 BRD4O60885 1362 aaPredicted RBP35.55■■■■□ 3.28
HLA-C-204ENST00000415537 ZC3H6P61129 1189 aaKnown RBP35.55■■■■□ 3.28
HLA-C-204ENST00000415537 A0A0G2JS52 829 aa35.54■■■■□ 3.28
HLA-C-204ENST00000415537 ONECUT3O60422 494 aaPredicted RBP35.54■■■■□ 3.28
HLA-C-204ENST00000415537 MYT1Q01538 1121 aa35.54■■■■□ 3.28
HLA-C-204ENST00000415537 NLRP13Q86W25 1043 aa35.53■■■■□ 3.28
HLA-C-204ENST00000415537 CCDC125Q86Z20 511 aa35.53■■■■□ 3.28
HLA-C-204ENST00000415537 CHRNA2Q15822 529 aa35.52■■■■□ 3.28
HLA-C-204ENST00000415537 USP6P35125 1406 aa35.49■■■■□ 3.27
HLA-C-204ENST00000415537 FAM98CQ17RN3 349 aaKnown RBP35.49■■■■□ 3.27
HLA-C-204ENST00000415537 EP400Q96L91 3159 aa35.47■■■■□ 3.27
HLA-C-204ENST00000415537 NRKQ7Z2Y5 1582 aa35.47■■■■□ 3.27
HLA-C-204ENST00000415537 KRT27Q7Z3Y8 459 aa35.46■■■■□ 3.27
HLA-C-204ENST00000415537 USP19O94966 1318 aa35.46■■■■□ 3.27
HLA-C-204ENST00000415537 SPATA31A5Q5VU36 1347 aa35.46■■■■□ 3.27
HLA-C-204ENST00000415537 SPATA31A7Q8IWB4 1347 aa35.46■■■■□ 3.27
HLA-C-204ENST00000415537 ZNF692Q9BU19 519 aaPredicted RBP35.45■■■■□ 3.27
HLA-C-204ENST00000415537 STRN4Q9NRL3 753 aa35.45■■■■□ 3.27
HLA-C-204ENST00000415537 SBNO2Q9Y2G9 1366 aa35.43■■■■□ 3.26
HLA-C-204ENST00000415537 GCP02774 474 aa35.43■■■■□ 3.26
HLA-C-204ENST00000415537 EVA1CP58658 441 aa35.43■■■■□ 3.26
HLA-C-204ENST00000415537 NLRP6P59044 892 aa35.43■■■■□ 3.26
HLA-C-204ENST00000415537 CPDO75976 1380 aa35.4■■■■□ 3.26
HLA-C-204ENST00000415537 AKAP12Q02952 1782 aa35.4■■■■□ 3.26
HLA-C-204ENST00000415537 BLMP54132 1417 aaPredicted RBP35.39■■■■□ 3.26
HLA-C-204ENST00000415537 SPATA31A1Q5TZJ5 1347 aa35.37■■■■□ 3.25
HLA-C-204ENST00000415537 SF3B2Q13435 895 aaKnown RBP35.37■■■■□ 3.25
HLA-C-204ENST00000415537 SSH2Q76I76 1423 aa35.37■■■■□ 3.25
HLA-C-204ENST00000415537 PIK3C2AO00443 1686 aa35.34■■■■□ 3.25
HLA-C-204ENST00000415537 CAMTA1Q9Y6Y1 1673 aa35.33■■■■□ 3.25
HLA-C-204ENST00000415537 TTC21BQ7Z4L5 1316 aa35.33■■■■□ 3.25
HLA-C-204ENST00000415537 ZBTB7CA1YPR0 619 aa35.33■■■■□ 3.25
HLA-C-204ENST00000415537 USP35Q9P2H5 1018 aa35.33■■■■□ 3.25
HLA-C-204ENST00000415537 KTN1Q86UP2 1357 aaKnown RBP35.33■■■■□ 3.25
HLA-C-204ENST00000415537 LMO7Q8WWI1 1683 aa35.32■■■■□ 3.24
HLA-C-204ENST00000415537 SLIT3O75094 1523 aa35.31■■■■□ 3.24
HLA-C-204ENST00000415537 CPSF1Q10570 1443 aaKnown RBP35.31■■■■□ 3.24
HLA-C-204ENST00000415537 TTC21AQ8NDW8 1320 aa35.31■■■■□ 3.24
HLA-C-204ENST00000415537 THSD7AQ9UPZ6 1657 aa35.3■■■■□ 3.24
HLA-C-204ENST00000415537 TMC1Q8TDI8 760 aa35.29■■■■□ 3.24
HLA-C-204ENST00000415537 LARP1Q6PKG0 1096 aaKnown RBP35.28■■■■□ 3.24
HLA-C-204ENST00000415537 ZRANB1Q9UGI0 708 aa35.26■■■■□ 3.24
HLA-C-204ENST00000415537 MON2Q7Z3U7 1717 aa35.26■■■■□ 3.23
HLA-C-204ENST00000415537 KCNH5Q8NCM2 988 aa35.25■■■■□ 3.23
HLA-C-204ENST00000415537 BARGINQ6ZT62 677 aa35.23■■■■□ 3.23
HLA-C-204ENST00000415537 HDGFL2Q7Z4V5 671 aaPredicted RBP35.23■■■■□ 3.23
HLA-C-204ENST00000415537 TCP11L2Q8N4U5 519 aa35.23■■■■□ 3.23
HLA-C-204ENST00000415537 AATKQ6ZMQ8 1374 aa35.23■■■■□ 3.23
HLA-C-204ENST00000415537 COL5A2P05997 1499 aaPredicted RBP35.22■■■■□ 3.23
HLA-C-204ENST00000415537 ST20-MTHFSA0A0A6YYL1 179 aa35.22■■■■□ 3.23
HLA-C-204ENST00000415537 FAM182BQ5T319 152 aa35.22■■■■□ 3.23
HLA-C-204ENST00000415537 DEFB132Q7Z7B7 95 aa35.22■■■■□ 3.23
HLA-C-204ENST00000415537 SLC24A1O60721 1099 aa35.21■■■■□ 3.23
HLA-C-204ENST00000415537 PUS7Q96PZ0 661 aaKnown RBP35.21■■■■□ 3.23
HLA-C-204ENST00000415537 SOX12O15370 315 aa35.2■■■■□ 3.23
HLA-C-204ENST00000415537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.2■■■■□ 3.23
HLA-C-204ENST00000415537 PCGF6Q9BYE7 350 aa35.2■■■■□ 3.23
HLA-C-204ENST00000415537 SLC12A5Q9H2X9 1139 aa35.2■■■■□ 3.23
HLA-C-204ENST00000415537 THRAP3Q9Y2W1 955 aaKnown RBP35.2■■■■□ 3.23
HLA-C-204ENST00000415537 TERF2IPQ9NYB0 399 aa35.17■■■■□ 3.22
HLA-C-204ENST00000415537 CD163L1Q9NR16 1453 aa35.16■■■■□ 3.22
HLA-C-204ENST00000415537 CRB1P82279 1406 aa35.16■■■■□ 3.22
HLA-C-204ENST00000415537 BAG6P46379 1132 aa35.16■■■■□ 3.22
HLA-C-204ENST00000415537 PDE3BQ13370 1112 aa35.16■■■■□ 3.22
HLA-C-204ENST00000415537 TESK2Q96S53 571 aa35.16■■■■□ 3.22
HLA-C-204ENST00000415537 RGPD1P0DJD0 1748 aa35.15■■■■□ 3.22
HLA-C-204ENST00000415537 ARHGEF25Q86VW2 580 aa35.15■■■■□ 3.22
HLA-C-204ENST00000415537 COL18A1P39060 1754 aa35.15■■■■□ 3.22
HLA-C-204ENST00000415537 FAM196AQ6ZSG2 479 aa35.13■■■■□ 3.21
HLA-C-204ENST00000415537 TOM1L2Q6ZVM7 507 aa35.12■■■■□ 3.21
HLA-C-204ENST00000415537 CLSPNQ9HAW4 1339 aa35.11■■■■□ 3.21
HLA-C-204ENST00000415537 TIMELESSQ9UNS1 1208 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms