RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ZNF692Q9BU19 519 aaPredicted RBP35.51■■■■□ 3.28
CPNE1-207ENST00000414664 AFF2P51816 1311 aa35.51■■■■□ 3.27
CPNE1-207ENST00000414664 PLEKHG5O94827 1062 aa35.49■■■■□ 3.27
CPNE1-207ENST00000414664 CABLES1Q8TDN4 633 aa35.49■■■■□ 3.27
CPNE1-207ENST00000414664 TMF1P82094 1093 aa35.48■■■■□ 3.27
CPNE1-207ENST00000414664 POTEAQ6S8J7 498 aa35.47■■■■□ 3.27
CPNE1-207ENST00000414664 USP6P35125 1406 aa35.46■■■■□ 3.27
CPNE1-207ENST00000414664 TMC1Q8TDI8 760 aa35.45■■■■□ 3.27
CPNE1-207ENST00000414664 MARF1Q9Y4F3 1742 aaKnown RBP35.45■■■■□ 3.27
CPNE1-207ENST00000414664 ABTB2Q8N961 1025 aa35.44■■■■□ 3.26
CPNE1-207ENST00000414664 CDCA8Q53HL2 280 aa35.42■■■■□ 3.26
CPNE1-207ENST00000414664 FNBP4Q8N3X1 1017 aaPredicted RBP35.42■■■■□ 3.26
CPNE1-207ENST00000414664 EIF4G2P78344 907 aaKnown RBP eCLIP35.4■■■■□ 3.26
CPNE1-207ENST00000414664 USP21Q9UK80 565 aa35.4■■■■□ 3.26
CPNE1-207ENST00000414664 CPSF1Q10570 1443 aaKnown RBP35.4■■■■□ 3.26
CPNE1-207ENST00000414664 ABCA3Q99758 1704 aa35.39■■■■□ 3.26
CPNE1-207ENST00000414664 NINLQ9Y2I6 1382 aa35.38■■■■□ 3.26
CPNE1-207ENST00000414664 NUTM2GQ5VZR2 741 aa35.38■■■■□ 3.25
CPNE1-207ENST00000414664 HDGFL2Q7Z4V5 671 aaPredicted RBP35.38■■■■□ 3.25
CPNE1-207ENST00000414664 NLRP13Q86W25 1043 aa35.38■■■■□ 3.25
CPNE1-207ENST00000414664 SLC12A5Q9H2X9 1139 aa35.38■■■■□ 3.25
CPNE1-207ENST00000414664 AKAP12Q02952 1782 aa35.38■■■■□ 3.25
CPNE1-207ENST00000414664 KTN1Q86UP2 1357 aaKnown RBP35.38■■■■□ 3.25
CPNE1-207ENST00000414664 TERF2IPQ9NYB0 399 aa35.37■■■■□ 3.25
CPNE1-207ENST00000414664 SSH2Q76I76 1423 aa35.35■■■■□ 3.25
CPNE1-207ENST00000414664 QTRT2Q9H974 415 aaKnown RBP35.35■■■■□ 3.25
CPNE1-207ENST00000414664 TTC21BQ7Z4L5 1316 aa35.33■■■■□ 3.25
CPNE1-207ENST00000414664 TTC21AQ8NDW8 1320 aa35.32■■■■□ 3.25
CPNE1-207ENST00000414664 RXRBP28702 533 aa35.31■■■■□ 3.24
CPNE1-207ENST00000414664 NLRP6P59044 892 aa35.31■■■■□ 3.24
CPNE1-207ENST00000414664 TRPC5Q9UL62 973 aaPredicted RBP35.31■■■■□ 3.24
CPNE1-207ENST00000414664 CRYBG1Q9Y4K1 1723 aa35.31■■■■□ 3.24
CPNE1-207ENST00000414664 HSPA5P11021 654 aaKnown RBP35.3■■■■□ 3.24
CPNE1-207ENST00000414664 CD163L1Q9NR16 1453 aa35.29■■■■□ 3.24
CPNE1-207ENST00000414664 SLIT2O94813 1529 aa35.28■■■■□ 3.24
CPNE1-207ENST00000414664 FAM83GA6ND36 823 aa35.28■■■■□ 3.24
CPNE1-207ENST00000414664 MON2Q7Z3U7 1717 aa35.28■■■■□ 3.24
CPNE1-207ENST00000414664 USP19O94966 1318 aa35.28■■■■□ 3.24
CPNE1-207ENST00000414664 BCL9LQ86UU0 1499 aa35.27■■■■□ 3.24
CPNE1-207ENST00000414664 PHRF1Q9P1Y6 1649 aaKnown RBP35.26■■■■□ 3.24
CPNE1-207ENST00000414664 RBM6P78332 1123 aaKnown RBP35.26■■■■□ 3.24
CPNE1-207ENST00000414664 UNC5CLQ8IV45 518 aa35.26■■■■□ 3.24
CPNE1-207ENST00000414664 PRDM11Q9NQV5 511 aa35.25■■■■□ 3.23
CPNE1-207ENST00000414664 A0A1W2PP64 1363 aa35.25■■■■□ 3.23
CPNE1-207ENST00000414664 NRKQ7Z2Y5 1582 aa35.23■■■■□ 3.23
CPNE1-207ENST00000414664 EDC4Q6P2E9 1401 aaKnown RBP35.23■■■■□ 3.23
CPNE1-207ENST00000414664 GCP02774 474 aa35.22■■■■□ 3.23
CPNE1-207ENST00000414664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.22■■■■□ 3.23
CPNE1-207ENST00000414664 ATRNO75882 1429 aa35.22■■■■□ 3.23
CPNE1-207ENST00000414664 PIK3C2AO00443 1686 aa35.21■■■■□ 3.23
CPNE1-207ENST00000414664 COL14A1Q05707 1796 aaKnown RBP35.21■■■■□ 3.23
CPNE1-207ENST00000414664 ZC3H6P61129 1189 aaKnown RBP35.21■■■■□ 3.23
CPNE1-207ENST00000414664 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.2■■■■□ 3.23
CPNE1-207ENST00000414664 NWD2Q9ULI1 1742 aa35.2■■■■□ 3.23
CPNE1-207ENST00000414664 SOCS7O14512 581 aa35.2■■■■□ 3.23
CPNE1-207ENST00000414664 KIAA0232Q92628 1395 aa35.2■■■■□ 3.23
CPNE1-207ENST00000414664 PLCH1Q4KWH8 1693 aa35.2■■■■□ 3.23
CPNE1-207ENST00000414664 ANKRD36BQ8N2N9 1353 aa35.19■■■■□ 3.22
CPNE1-207ENST00000414664 BTG4Q9NY30 223 aa35.18■■■■□ 3.22
CPNE1-207ENST00000414664 CDK12Q9NYV4 1490 aaPredicted RBP35.16■■■■□ 3.22
CPNE1-207ENST00000414664 CPDO75976 1380 aa35.16■■■■□ 3.22
CPNE1-207ENST00000414664 KCNH5Q8NCM2 988 aa35.16■■■■□ 3.22
CPNE1-207ENST00000414664 SLIT3O75094 1523 aa35.15■■■■□ 3.22
CPNE1-207ENST00000414664 GJD4Q96KN9 370 aaPredicted RBP35.14■■■■□ 3.22
CPNE1-207ENST00000414664 USP31Q70CQ4 1352 aa35.13■■■■□ 3.21
CPNE1-207ENST00000414664 CHRNA2Q15822 529 aa35.13■■■■□ 3.21
CPNE1-207ENST00000414664 VPS72Q15906 364 aa35.13■■■■□ 3.21
CPNE1-207ENST00000414664 NME9Q86XW9 330 aa35.13■■■■□ 3.21
CPNE1-207ENST00000414664 POLR3GLQ9BT43 218 aa35.11■■■■□ 3.21
CPNE1-207ENST00000414664 CCDC9Q9Y3X0 531 aaKnown RBP35.1■■■■□ 3.21
CPNE1-207ENST00000414664 ZRANB1Q9UGI0 708 aa35.07■■■■□ 3.2
CPNE1-207ENST00000414664 NRAPQ86VF7 1730 aa35.06■■■■□ 3.2
CPNE1-207ENST00000414664 MYOM1P52179 1685 aa35.05■■■■□ 3.2
CPNE1-207ENST00000414664 USP54Q70EL1 1684 aa35.05■■■■□ 3.2
CPNE1-207ENST00000414664 ZBTB7CA1YPR0 619 aa35.04■■■■□ 3.2
CPNE1-207ENST00000414664 SOX12O15370 315 aa35.03■■■■□ 3.2
CPNE1-207ENST00000414664 EVA1CP58658 441 aa35.03■■■■□ 3.2
CPNE1-207ENST00000414664 RGS12O14924 1447 aa35.02■■■■□ 3.2
CPNE1-207ENST00000414664 AATKQ6ZMQ8 1374 aa35.01■■■■□ 3.2
CPNE1-207ENST00000414664 COG3Q96JB2 828 aa35.01■■■■□ 3.2
CPNE1-207ENST00000414664 STRN4Q9NRL3 753 aa35.01■■■■□ 3.2
CPNE1-207ENST00000414664 ARHGEF25Q86VW2 580 aa35■■■■□ 3.19
CPNE1-207ENST00000414664 GLI3P10071 1580 aa34.99■■■■□ 3.19
CPNE1-207ENST00000414664 OVOS2A0A0J9YW53 1432 aa34.98■■■■□ 3.19
CPNE1-207ENST00000414664 OVOS2Q6IE36 1432 aa34.98■■■■□ 3.19
CPNE1-207ENST00000414664 LMO7Q8WWI1 1683 aa34.98■■■■□ 3.19
CPNE1-207ENST00000414664 CAMTA1Q9Y6Y1 1673 aa34.98■■■■□ 3.19
CPNE1-207ENST00000414664 NFAT5O94916 1531 aa34.97■■■■□ 3.19
CPNE1-207ENST00000414664 C11orf95C9JLR9 678 aaPredicted RBP34.96■■■■□ 3.19
CPNE1-207ENST00000414664 CARD14Q9BXL6 1004 aa34.96■■■■□ 3.19
CPNE1-207ENST00000414664 SPATA31A5Q5VU36 1347 aa34.96■■■■□ 3.19
CPNE1-207ENST00000414664 SPATA31A7Q8IWB4 1347 aa34.96■■■■□ 3.19
CPNE1-207ENST00000414664 FYB1O15117 783 aa34.95■■■■□ 3.19
CPNE1-207ENST00000414664 NSD3Q9BZ95 1437 aa34.93■■■■□ 3.18
CPNE1-207ENST00000414664 ONECUT3O60422 494 aaPredicted RBP34.92■■■■□ 3.18
CPNE1-207ENST00000414664 GGNBP2Q9H3C7 697 aa34.91■■■■□ 3.18
CPNE1-207ENST00000414664 SPATA31A1Q5TZJ5 1347 aa34.9■■■■□ 3.18
CPNE1-207ENST00000414664 COL5A2P05997 1499 aaPredicted RBP34.9■■■■□ 3.18
CPNE1-207ENST00000414664 COL18A1P39060 1754 aa34.89■■■■□ 3.18
CPNE1-207ENST00000414664 KIF7Q2M1P5 1343 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms