RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PPIP5K1Q6PFW1 1433 aa37.52■■■■□ 3.6
VEGFA-207ENST00000413642 SLIT2O94813 1529 aa37.51■■■■□ 3.6
VEGFA-207ENST00000413642 ALS2Q96Q42 1657 aa37.51■■■■□ 3.6
VEGFA-207ENST00000413642 FAM83GA6ND36 823 aa37.49■■■■□ 3.59
VEGFA-207ENST00000413642 NUTM2GQ5VZR2 741 aa37.49■■■■□ 3.59
VEGFA-207ENST00000413642 UNC5CLQ8IV45 518 aa37.49■■■■□ 3.59
VEGFA-207ENST00000413642 CABP1Q9NZU7 370 aa37.49■■■■□ 3.59
VEGFA-207ENST00000413642 EVC2Q86UK5 1308 aa37.49■■■■□ 3.59
VEGFA-207ENST00000413642 RALGAPBQ86X10 1494 aa37.47■■■■□ 3.59
VEGFA-207ENST00000413642 ABCA3Q99758 1704 aa37.47■■■■□ 3.59
VEGFA-207ENST00000413642 GJD4Q96KN9 370 aaPredicted RBP37.44■■■■□ 3.58
VEGFA-207ENST00000413642 UPF1Q92900 1129 aaKnown RBP eCLIP37.4■■■■□ 3.58
VEGFA-207ENST00000413642 ABTB2Q8N961 1025 aa37.37■■■■□ 3.57
VEGFA-207ENST00000413642 BTG4Q9NY30 223 aa37.34■■■■□ 3.57
VEGFA-207ENST00000413642 VPS72Q15906 364 aa37.33■■■■□ 3.57
VEGFA-207ENST00000413642 CRYBG1Q9Y4K1 1723 aa37.33■■■■□ 3.57
VEGFA-207ENST00000413642 PLCH1Q4KWH8 1693 aa37.32■■■■□ 3.57
VEGFA-207ENST00000413642 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.32■■■■□ 3.56
VEGFA-207ENST00000413642 PRDM11Q9NQV5 511 aa37.31■■■■□ 3.56
VEGFA-207ENST00000413642 CCDC9Q9Y3X0 531 aaKnown RBP37.31■■■■□ 3.56
VEGFA-207ENST00000413642 SBNO2Q9Y2G9 1366 aa37.3■■■■□ 3.56
VEGFA-207ENST00000413642 GLI3P10071 1580 aa37.3■■■■□ 3.56
VEGFA-207ENST00000413642 USP6P35125 1406 aa37.3■■■■□ 3.56
VEGFA-207ENST00000413642 ZC3H6P61129 1189 aaKnown RBP37.3■■■■□ 3.56
VEGFA-207ENST00000413642 KIAA0232Q92628 1395 aa37.29■■■■□ 3.56
VEGFA-207ENST00000413642 CHRNA2Q15822 529 aa37.29■■■■□ 3.56
VEGFA-207ENST00000413642 ATAD2Q6PL18 1390 aa37.26■■■■□ 3.55
VEGFA-207ENST00000413642 NLRP13Q86W25 1043 aa37.24■■■■□ 3.55
VEGFA-207ENST00000413642 USP19O94966 1318 aa37.24■■■■□ 3.55
VEGFA-207ENST00000413642 SSH2Q76I76 1423 aa37.24■■■■□ 3.55
VEGFA-207ENST00000413642 NWD2Q9ULI1 1742 aa37.24■■■■□ 3.55
VEGFA-207ENST00000413642 ST20-MTHFSA0A0A6YYL1 179 aa37.23■■■■□ 3.55
VEGFA-207ENST00000413642 BRD4O60885 1362 aaPredicted RBP37.23■■■■□ 3.55
VEGFA-207ENST00000413642 COL14A1Q05707 1796 aaKnown RBP37.23■■■■□ 3.55
VEGFA-207ENST00000413642 PHRF1Q9P1Y6 1649 aaKnown RBP37.23■■■■□ 3.55
VEGFA-207ENST00000413642 NLRP6P59044 892 aa37.2■■■■□ 3.55
VEGFA-207ENST00000413642 TESK2Q96S53 571 aa37.2■■■■□ 3.55
VEGFA-207ENST00000413642 CLSPNQ9HAW4 1339 aa37.19■■■■□ 3.54
VEGFA-207ENST00000413642 ZNF692Q9BU19 519 aaPredicted RBP37.19■■■■□ 3.54
VEGFA-207ENST00000413642 NRAPQ86VF7 1730 aa37.19■■■■□ 3.54
VEGFA-207ENST00000413642 GCP02774 474 aa37.18■■■■□ 3.54
VEGFA-207ENST00000413642 SEPT12Q8IYM1 358 aa37.18■■■■□ 3.54
VEGFA-207ENST00000413642 TTC21BQ7Z4L5 1316 aa37.17■■■■□ 3.54
VEGFA-207ENST00000413642 CPSF1Q10570 1443 aaKnown RBP37.17■■■■□ 3.54
VEGFA-207ENST00000413642 NRKQ7Z2Y5 1582 aa37.17■■■■□ 3.54
VEGFA-207ENST00000413642 TMC1Q8TDI8 760 aa37.16■■■■□ 3.54
VEGFA-207ENST00000413642 ONECUT3O60422 494 aaPredicted RBP37.14■■■■□ 3.54
VEGFA-207ENST00000413642 SLC12A5Q9H2X9 1139 aa37.14■■■■□ 3.54
VEGFA-207ENST00000413642 STRN4Q9NRL3 753 aa37.14■■■■□ 3.54
VEGFA-207ENST00000413642 TIMELESSQ9UNS1 1208 aa37.13■■■■□ 3.53
VEGFA-207ENST00000413642 KTN1Q86UP2 1357 aaKnown RBP37.13■■■■□ 3.53
VEGFA-207ENST00000413642 FAM98CQ17RN3 349 aaKnown RBP37.12■■■■□ 3.53
VEGFA-207ENST00000413642 CCER1Q8TC90 406 aaPredicted RBP37.12■■■■□ 3.53
VEGFA-207ENST00000413642 SPATA31A5Q5VU36 1347 aa37.11■■■■□ 3.53
VEGFA-207ENST00000413642 SPATA31A7Q8IWB4 1347 aa37.11■■■■□ 3.53
VEGFA-207ENST00000413642 CPDO75976 1380 aa37.11■■■■□ 3.53
VEGFA-207ENST00000413642 ZBTB7CA1YPR0 619 aa37.1■■■■□ 3.53
VEGFA-207ENST00000413642 CD163L1Q9NR16 1453 aa37.09■■■■□ 3.53
VEGFA-207ENST00000413642 USP47Q96K76 1375 aa37.08■■■■□ 3.53
VEGFA-207ENST00000413642 A0A0G2JS52 829 aa37.08■■■■□ 3.53
VEGFA-207ENST00000413642 MYT1Q01538 1121 aa37.08■■■■□ 3.53
VEGFA-207ENST00000413642 PIK3C2AO00443 1686 aa37.08■■■■□ 3.53
VEGFA-207ENST00000413642 AKAP12Q02952 1782 aa37.06■■■■□ 3.52
VEGFA-207ENST00000413642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.06■■■■□ 3.52
VEGFA-207ENST00000413642 ZRANB1Q9UGI0 708 aa37.06■■■■□ 3.52
VEGFA-207ENST00000413642 TTC21AQ8NDW8 1320 aa37.06■■■■□ 3.52
VEGFA-207ENST00000413642 CAMTA1Q9Y6Y1 1673 aa37.05■■■■□ 3.52
VEGFA-207ENST00000413642 PUS7Q96PZ0 661 aaKnown RBP37.05■■■■□ 3.52
VEGFA-207ENST00000413642 SLIT3O75094 1523 aa37.05■■■■□ 3.52
VEGFA-207ENST00000413642 EVA1CP58658 441 aa37.04■■■■□ 3.52
VEGFA-207ENST00000413642 SOX12O15370 315 aa37.03■■■■□ 3.52
VEGFA-207ENST00000413642 SPATA31A1Q5TZJ5 1347 aa37.03■■■■□ 3.52
VEGFA-207ENST00000413642 LARP1Q6PKG0 1096 aaKnown RBP37.01■■■■□ 3.52
VEGFA-207ENST00000413642 KRT27Q7Z3Y8 459 aa37.01■■■■□ 3.52
VEGFA-207ENST00000413642 HDGFL2Q7Z4V5 671 aaPredicted RBP37.01■■■■□ 3.52
VEGFA-207ENST00000413642 NME9Q86XW9 330 aa37■■■■□ 3.51
VEGFA-207ENST00000413642 USP35Q9P2H5 1018 aa37■■■■□ 3.51
VEGFA-207ENST00000413642 A0A1W2PP64 1363 aa36.98■■■■□ 3.51
VEGFA-207ENST00000413642 LMO7Q8WWI1 1683 aa36.98■■■■□ 3.51
VEGFA-207ENST00000413642 BRWD3Q6RI45 1802 aa36.98■■■■□ 3.51
VEGFA-207ENST00000413642 TERF2IPQ9NYB0 399 aa36.97■■■■□ 3.51
VEGFA-207ENST00000413642 MON2Q7Z3U7 1717 aa36.96■■■■□ 3.51
VEGFA-207ENST00000413642 AATKQ6ZMQ8 1374 aa36.94■■■■□ 3.5
VEGFA-207ENST00000413642 SLC24A1O60721 1099 aa36.93■■■■□ 3.5
VEGFA-207ENST00000413642 TMF1P82094 1093 aa36.93■■■■□ 3.5
VEGFA-207ENST00000413642 ARHGEF25Q86VW2 580 aa36.93■■■■□ 3.5
VEGFA-207ENST00000413642 KCNH5Q8NCM2 988 aa36.93■■■■□ 3.5
VEGFA-207ENST00000413642 FAM182BQ5T319 152 aa36.92■■■■□ 3.5
VEGFA-207ENST00000413642 AXIN2Q9Y2T1 843 aa36.92■■■■□ 3.5
VEGFA-207ENST00000413642 COL5A2P05997 1499 aaPredicted RBP36.91■■■■□ 3.5
VEGFA-207ENST00000413642 USP31Q70CQ4 1352 aa36.91■■■■□ 3.5
VEGFA-207ENST00000413642 EDC4Q6P2E9 1401 aaKnown RBP36.9■■■■□ 3.5
VEGFA-207ENST00000413642 CCDC125Q86Z20 511 aa36.88■■■■□ 3.49
VEGFA-207ENST00000413642 THSD7AQ9UPZ6 1657 aa36.87■■■■□ 3.49
VEGFA-207ENST00000413642 TCP11L2Q8N4U5 519 aa36.86■■■■□ 3.49
VEGFA-207ENST00000413642 NINLQ9Y2I6 1382 aa36.86■■■■□ 3.49
VEGFA-207ENST00000413642 NFAT5O94916 1531 aa36.85■■■■□ 3.49
VEGFA-207ENST00000413642 BARGINQ6ZT62 677 aa36.85■■■■□ 3.49
VEGFA-207ENST00000413642 BLMP54132 1417 aaPredicted RBP36.84■■■■□ 3.49
VEGFA-207ENST00000413642 COL18A1P39060 1754 aa36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms