RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 NDUFV2P19404 249 aa7.01□□□□□ -1.29
HMGB3P2-201ENST00000411913 SSTR3P32745 418 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P2-201ENST00000411913 FAM174AQ8TBP5 190 aa7.01□□□□□ -1.29
HMGB3P2-201ENST00000411913 SPIRE2Q8WWL2 714 aa7.01□□□□□ -1.29
HMGB3P2-201ENST00000411913 SPDYE5A6NIY4 337 aa7□□□□□ -1.29
HMGB3P2-201ENST00000411913 CTHP32929 405 aa7□□□□□ -1.29
HMGB3P2-201ENST00000411913 HAP1P54257 671 aaPredicted RBP7□□□□□ -1.29
HMGB3P2-201ENST00000411913 ARID5BQ14865 1188 aa7□□□□□ -1.29
HMGB3P2-201ENST00000411913 MTMR2Q13614 643 aa6.99□□□□□ -1.29
HMGB3P2-201ENST00000411913 C6orf118Q5T5N4 469 aa6.99□□□□□ -1.29
HMGB3P2-201ENST00000411913 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 MOXD2PA6NHM9 499 aa6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 ZIC2O95409 532 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
HMGB3P2-201ENST00000411913 UPP2O95045 317 aa6.97□□□□□ -1.29
HMGB3P2-201ENST00000411913 BMP2P12643 396 aa6.96□□□□□ -1.3
HMGB3P2-201ENST00000411913 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P2-201ENST00000411913 AGERQ15109 404 aa6.96□□□□□ -1.3
HMGB3P2-201ENST00000411913 KLF16Q9BXK1 252 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P2-201ENST00000411913 ZFAND3Q9H8U3 227 aa6.96□□□□□ -1.3
HMGB3P2-201ENST00000411913 SUZ12Q15022 739 aaKnown RBP6.95□□□□□ -1.3
HMGB3P2-201ENST00000411913 LYPD8Q6UX82 237 aa6.95□□□□□ -1.3
HMGB3P2-201ENST00000411913 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
HMGB3P2-201ENST00000411913 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 NR5A1Q13285 461 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 CDK15Q96Q40 435 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 KDM2AQ9Y2K7 1162 aa6.94□□□□□ -1.3
HMGB3P2-201ENST00000411913 KCNMA1Q12791 1236 aa6.93□□□□□ -1.3
HMGB3P2-201ENST00000411913 SPTLC1O15269 473 aa6.92□□□□□ -1.3
HMGB3P2-201ENST00000411913 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
HMGB3P2-201ENST00000411913 BEGAINQ9BUH8 593 aa6.92□□□□□ -1.3
HMGB3P2-201ENST00000411913 NR3C2P08235 984 aa6.91□□□□□ -1.3
HMGB3P2-201ENST00000411913 BPHLQ86WA6 291 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P2-201ENST00000411913 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
HMGB3P2-201ENST00000411913 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
HMGB3P2-201ENST00000411913 GDF11O95390 407 aa6.9□□□□□ -1.3
HMGB3P2-201ENST00000411913 DIXDC1Q155Q3 683 aa6.9□□□□□ -1.3
HMGB3P2-201ENST00000411913 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
HMGB3P2-201ENST00000411913 TBC1D2Q9BYX2 928 aa6.9□□□□□ -1.3
HMGB3P2-201ENST00000411913 PCDHB15Q9Y5E8 787 aa6.9□□□□□ -1.3
HMGB3P2-201ENST00000411913 CFAP99D6REC4 459 aa6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 GJA5P36382 358 aa6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 GRM5P41594 1212 aa6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 ZBTB3Q9H5J0 574 aa6.89□□□□□ -1.31
HMGB3P2-201ENST00000411913 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 RNF225M0QZC1 329 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 F12P00748 615 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 TSEN34Q9BSV6 310 aaKnown RBP6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 DNMT3LQ9UJW3 386 aa6.88□□□□□ -1.31
HMGB3P2-201ENST00000411913 HRCP23327 699 aa6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 RASSF7Q02833 373 aa6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 TSC1Q92574 1164 aa6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 ADAMTS8Q9UP79 889 aa6.87□□□□□ -1.31
HMGB3P2-201ENST00000411913 FSHRP23945 695 aa6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 GSK3AP49840 483 aa6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 AMHR2Q16671 573 aa6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 VASH1Q7L8A9 365 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 ARMC2Q8NEN0 867 aa6.86□□□□□ -1.31
HMGB3P2-201ENST00000411913 TTLL8A6PVC2 850 aa6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 KRT76Q01546 638 aa6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 CSPP1Q1MSJ5 1256 aa6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 RIC3Q7Z5B4 369 aa6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 GPR161Q8N6U8 529 aaKnown RBP6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 EMILIN1Q9Y6C2 1016 aa6.85□□□□□ -1.31
HMGB3P2-201ENST00000411913 FIGNL2A6NMB9 653 aa6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 PTSQ03393 145 aa6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 PRPF38BQ5VTL8 546 aaKnown RBP6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 BARGINQ6ZT62 677 aa6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 CABLES1Q8TDN4 633 aa6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P2-201ENST00000411913 MAGEB6P1A0A0J9YX57 407 aa6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 NUTM2BA6NNL0 878 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 NUTM2EB1AL46 878 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 NUTM2DQ5VT03 806 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 NUTM2AQ8IVF1 878 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 CCDC116Q8IYX3 515 aa6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
HMGB3P2-201ENST00000411913 VSIG10Q8N0Z9 540 aa6.82□□□□□ -1.32
HMGB3P2-201ENST00000411913 MAP4K5Q9Y4K4 846 aa6.82□□□□□ -1.32
HMGB3P2-201ENST00000411913 CCDC155Q8N6L0 562 aa6.81□□□□□ -1.32
HMGB3P2-201ENST00000411913 C1QTNF2Q9BXJ5 285 aa6.81□□□□□ -1.32
HMGB3P2-201ENST00000411913 ZMYND10O75800 440 aa6.8□□□□□ -1.32
HMGB3P2-201ENST00000411913 ZNF385CQ66K41 422 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P2-201ENST00000411913 SH3RF1Q7Z6J0 888 aa6.8□□□□□ -1.32
HMGB3P2-201ENST00000411913 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
HMGB3P2-201ENST00000411913 CARD14Q9BXL6 1004 aa6.8□□□□□ -1.32
HMGB3P2-201ENST00000411913 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms