RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
MRPL55-220ENST00000411464 SPATA31A5Q5VU36 1347 aa24.41■■□□□ 1.5
MRPL55-220ENST00000411464 SPATA31A7Q8IWB4 1347 aa24.41■■□□□ 1.5
MRPL55-220ENST00000411464 BRWD3Q6RI45 1802 aa24.41■■□□□ 1.5
MRPL55-220ENST00000411464 NUDT16Q96DE0 195 aaKnown RBP24.41■■□□□ 1.5
MRPL55-220ENST00000411464 ABCA3Q99758 1704 aa24.39■■□□□ 1.5
MRPL55-220ENST00000411464 HRCP23327 699 aa24.39■■□□□ 1.49
MRPL55-220ENST00000411464 TRPM3Q9HCF6 1732 aaPredicted RBP24.38■■□□□ 1.49
MRPL55-220ENST00000411464 FAM182BQ5T319 152 aa24.37■■□□□ 1.49
MRPL55-220ENST00000411464 PSDA5PKW4 1024 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-220ENST00000411464 CDK19Q9BWU1 502 aa24.36■■□□□ 1.49
MRPL55-220ENST00000411464 COL14A1Q05707 1796 aaKnown RBP24.35■■□□□ 1.49
MRPL55-220ENST00000411464 EN1Q05925 392 aaPredicted RBP24.35■■□□□ 1.49
MRPL55-220ENST00000411464 ALS2Q96Q42 1657 aa24.34■■□□□ 1.49
MRPL55-220ENST00000411464 KIAA0232Q92628 1395 aa24.34■■□□□ 1.49
MRPL55-220ENST00000411464 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
MRPL55-220ENST00000411464 STRN4Q9NRL3 753 aa24.34■■□□□ 1.49
MRPL55-220ENST00000411464 NUTM2GQ5VZR2 741 aa24.33■■□□□ 1.49
MRPL55-220ENST00000411464 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.49
MRPL55-220ENST00000411464 ZC3H6P61129 1189 aaKnown RBP24.32■■□□□ 1.48
MRPL55-220ENST00000411464 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
MRPL55-220ENST00000411464 SPATA31A1Q5TZJ5 1347 aa24.32■■□□□ 1.48
MRPL55-220ENST00000411464 NBPF8Q3BBV2 869 aa24.31■■□□□ 1.48
MRPL55-220ENST00000411464 ATP7BP35670 1465 aa24.31■■□□□ 1.48
MRPL55-220ENST00000411464 EVA1CP58658 441 aa24.3■■□□□ 1.48
MRPL55-220ENST00000411464 ACEP12821 1306 aa24.3■■□□□ 1.48
MRPL55-220ENST00000411464 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
MRPL55-220ENST00000411464 USP35Q9P2H5 1018 aa24.28■■□□□ 1.48
MRPL55-220ENST00000411464 PLEKHG3A1L390 1219 aa24.27■■□□□ 1.48
MRPL55-220ENST00000411464 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
MRPL55-220ENST00000411464 POLR3AO14802 1390 aaPredicted RBP24.27■■□□□ 1.48
MRPL55-220ENST00000411464 TRIM37O94972 964 aa24.25■■□□□ 1.47
MRPL55-220ENST00000411464 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
MRPL55-220ENST00000411464 PDE3BQ13370 1112 aa24.23■■□□□ 1.47
MRPL55-220ENST00000411464 EZH2Q15910 746 aaKnown RBP24.23■■□□□ 1.47
MRPL55-220ENST00000411464 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
MRPL55-220ENST00000411464 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
MRPL55-220ENST00000411464 NBPF1Q3BBV0 1214 aa24.22■■□□□ 1.47
MRPL55-220ENST00000411464 BARGINQ6ZT62 677 aa24.22■■□□□ 1.47
MRPL55-220ENST00000411464 APBA3O96018 575 aa24.21■■□□□ 1.47
MRPL55-220ENST00000411464 ARHGEF28Q8N1W1 1705 aaKnown RBP24.21■■□□□ 1.47
MRPL55-220ENST00000411464 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
MRPL55-220ENST00000411464 NLRP13Q86W25 1043 aa24.2■■□□□ 1.46
MRPL55-220ENST00000411464 CAMKK2Q96RR4 588 aa24.2■■□□□ 1.46
MRPL55-220ENST00000411464 ITSN1Q15811 1721 aa24.2■■□□□ 1.46
MRPL55-220ENST00000411464 CRYBG1Q9Y4K1 1723 aa24.2■■□□□ 1.46
MRPL55-220ENST00000411464 LRP5O75197 1615 aa24.2■■□□□ 1.46
MRPL55-220ENST00000411464 LARP1Q6PKG0 1096 aaKnown RBP24.19■■□□□ 1.46
MRPL55-220ENST00000411464 TCP11L2Q8N4U5 519 aa24.19■■□□□ 1.46
MRPL55-220ENST00000411464 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
MRPL55-220ENST00000411464 CPDO75976 1380 aa24.17■■□□□ 1.46
MRPL55-220ENST00000411464 GCP02774 474 aa24.17■■□□□ 1.46
MRPL55-220ENST00000411464 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
MRPL55-220ENST00000411464 USP19O94966 1318 aa24.16■■□□□ 1.46
MRPL55-220ENST00000411464 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
MRPL55-220ENST00000411464 CABP2Q9NPB3 220 aa24.16■■□□□ 1.46
MRPL55-220ENST00000411464 THRAP3Q9Y2W1 955 aaKnown RBP24.15■■□□□ 1.46
MRPL55-220ENST00000411464 PARD3Q8TEW0 1356 aa24.15■■□□□ 1.46
MRPL55-220ENST00000411464 PPIP5K1Q6PFW1 1433 aa24.14■■□□□ 1.45
MRPL55-220ENST00000411464 PHRF1Q9P1Y6 1649 aaKnown RBP24.13■■□□□ 1.45
MRPL55-220ENST00000411464 CAMTA1Q9Y6Y1 1673 aa24.12■■□□□ 1.45
MRPL55-220ENST00000411464 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
MRPL55-220ENST00000411464 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
MRPL55-220ENST00000411464 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
MRPL55-220ENST00000411464 NLRP6P59044 892 aa24.1■■□□□ 1.45
MRPL55-220ENST00000411464 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
MRPL55-220ENST00000411464 TOPAZ1Q8N9V7 1692 aa24.09■■□□□ 1.45
MRPL55-220ENST00000411464 KIAA1210Q9ULL0 1709 aa24.08■■□□□ 1.45
MRPL55-220ENST00000411464 C11orf95C9JLR9 678 aaPredicted RBP24.08■■□□□ 1.45
MRPL55-220ENST00000411464 NRKQ7Z2Y5 1582 aa24.08■■□□□ 1.44
MRPL55-220ENST00000411464 TNS1Q9HBL0 1735 aaKnown RBP24.07■■□□□ 1.44
MRPL55-220ENST00000411464 COL5A2P05997 1499 aaPredicted RBP24.04■■□□□ 1.44
MRPL55-220ENST00000411464 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
MRPL55-220ENST00000411464 USP6P35125 1406 aa24.03■■□□□ 1.44
MRPL55-220ENST00000411464 CRB1P82279 1406 aa24.03■■□□□ 1.44
MRPL55-220ENST00000411464 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
MRPL55-220ENST00000411464 TOM1L2Q6ZVM7 507 aa24.02■■□□□ 1.44
MRPL55-220ENST00000411464 L3MBTL2Q969R5 705 aa24.02■■□□□ 1.44
MRPL55-220ENST00000411464 LMO7Q8WWI1 1683 aa24.02■■□□□ 1.44
MRPL55-220ENST00000411464 DDB1Q16531 1140 aa24.01■■□□□ 1.43
MRPL55-220ENST00000411464 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
MRPL55-220ENST00000411464 OVOS2A0A0G2JMS6 1433 aa23.97■■□□□ 1.43
MRPL55-220ENST00000411464 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
MRPL55-220ENST00000411464 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
MRPL55-220ENST00000411464 KCNH5Q8NCM2 988 aa23.96■■□□□ 1.43
MRPL55-220ENST00000411464 SPON1Q9HCB6 807 aa23.96■■□□□ 1.43
MRPL55-220ENST00000411464 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
MRPL55-220ENST00000411464 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
MRPL55-220ENST00000411464 PLSCR1O15162 318 aa23.95■■□□□ 1.42
MRPL55-220ENST00000411464 CDCA7Q9BWT1 371 aaPredicted RBP23.95■■□□□ 1.42
MRPL55-220ENST00000411464 PPP1R1BQ9UD71 204 aaPredicted RBP23.95■■□□□ 1.42
MRPL55-220ENST00000411464 TTC21BQ7Z4L5 1316 aa23.94■■□□□ 1.42
MRPL55-220ENST00000411464 SOX12O15370 315 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 KCNQ2O43526 872 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 CSB-PGBD3P0DP91 1061 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 BCL11BQ9C0K0 894 aaPredicted RBP23.93■■□□□ 1.42
MRPL55-220ENST00000411464 SLIT3O75094 1523 aa23.93■■□□□ 1.42
MRPL55-220ENST00000411464 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms